New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4139337 =	45 (0.890)	5 (0.100)	4/248	NT	11.1%	coding (270/1041 nt)	PP_3644	monooxygenase subunit
	?	NC_002947	4139373 =	37 (0.760)					coding (306/1041 nt)	PP_3644	monooxygenase subunit

CGATGCCGCTGCTGGCCTACCTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGACGGCGGCAAGGCGCTGCGCGAGATGGTGCCGGTGGTGCGCAAGCTGTGGGAAGGCGACTACGCCCACGACGGTGAA  >  NC_002947/4139234‑4139520                                                                                                                                            |                                                                                                                                                     cGATGCCGCTGCTGGCCTACCTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGc                                                                                                                                             <  8:84180/149‑1 (MQ=255)       cGCTGCTGGCCTACCTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGcc                                                                                                                                       >  2:107234/1‑149 (MQ=255)         ctgctgGCCTACCTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCcg                                                                                                                                     <  4:144738/149‑1 (MQ=255)               gCCTACCTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGcc                                                                                                                                       <  8:192137/141‑1 (MQ=255)               gCCTACCTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGcc                                                                                                                                       >  7:192137/1‑141 (MQ=255)               gCCTACCTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTg                                                                                                                                <  2:185398/148‑1 (MQ=255)               gCCTACCTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGc                                                                                                                               >  7:289459/1‑149 (MQ=255)                ccTACCTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGcc                                                                                                                              <  5:69027/149‑1 (MQ=255)                     cTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCa                                                                                                                         <  1:266156/149‑1 (MQ=255)                           gcgcgcACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGTCTGGCCCGCGGTGCCTACCag‑ttcga                                                                                                                  <  3:280637/149‑1 (MQ=255)                                     agaagaTCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCg                                                                                                         >  3:23311/1‑148 (MQ=255)                                           tCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATgg                                                                                                    >  6:177454/1‑147 (MQ=255)                                           tCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCa                                                                                                  <  7:46602/149‑1 (MQ=255)                                             cGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAg                                                                                                 <  1:218154/148‑1 (MQ=255)                                                  gggCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCa                                                                                           >  3:56046/1‑149 (MQ=255)                                                      gcCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGcc                                                                                       >  5:79106/1‑149 (MQ=255)                                                            aCCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCAc                                                                                 >  8:182108/1‑149 (MQ=255)                                                               atcatTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGa                                                                              >  5:296663/1‑149 (MQ=255)                                                                  atTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGAcgg                                                                           <  1:107234/149‑1 (MQ=255)                                                                   tggctccGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGAcggc                                                                          <  8:146155/144‑1 (MQ=255)                                                                        ccGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGACGGCGGCaa                                                                     <  6:79106/149‑1 (MQ=255)                                                                         cGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGACGGCGGCAAg                                                                    <  8:15989/149‑1 (MQ=255)                                                                          gTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAGTTTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGACGGCGGCAAg                                                                    <  1:80089/149‑1 (MQ=255)                                                                                gAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGACGGCGGCAAGGCGCTgc                                                             <  6:296663/149‑1 (MQ=255)                                                                                        tCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGACGGCGGCAAGGCGCTGCGCGAGATg                                                     >  3:287228/1‑149 (MQ=255)                                                                                          cgcgTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGACGGCGGCAAGGCGCTGCGCGAGATGGt                                                   <  5:177454/149‑1 (MQ=255)                                                                                           gcgTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCTGGCCACCGACGGCGGCAAGgc                                                                  <  7:86673/133‑1 (MQ=255)                                                                                           gcgTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCTGGCCACCGACGGCGGCAAGgc                                                                  >  8:86673/1‑133 (MQ=255)                                                                                                  tGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGACGGCGGCAAGGCGCTGCGCGAGATGGTGCCggtgg                                           >  2:120070/1‑149 (MQ=255)                                                                                                     cGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGACGGCGGCAAGGCGCTGCGCGAGATGGTGCCGGTGGTgc                                        <  1:120070/149‑1 (MQ=255)                                                                                                        atgcggccgttgctgatcacgtcgagcagggcgcatGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGACGGCGGCAAGGCGCTGCGCgaga                                                       <  3:200830‑M2/95‑1 (MQ=255)                                                                                                        atgcggccgttgctgatcacgtcgagcagggcgcatGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGACGGCGGCAAGGCGCTGCGCgaga                                                       >  4:200830‑M2/37‑131 (MQ=255)                                                                                                        atgcggccgttgctgatcacgtcgagcagggcgcatGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGACGGCGGCAAGGCGCTGCGCGAGATGGTGCCGGTGGTgcgc                                      >  6:329944‑M2/37‑148 (MQ=255)                                                                                                         tgcggccgttgctgatcacgtcgagcagggcgcatGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGAATGGCAGGTGGCATGCCGGCCACCGAcggc                                                                          >  6:143468‑M2/36‑111 (MQ=255)                                                                                                         tgcggccggtgctgatcacgtcgagcagggcgcatGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGAcggc                                                                          <  5:143468‑M2/76‑1 (MQ=255)                                                                                                            GCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGACGGCGGCAAGGCGCTGCGCGAGATGGTGc                                                 >  6:67187‑M1/1‑133 (MQ=255)                                                                                                            GCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGACGGCGGCAAGGCGCTGCGCGAGATGGTGc                                                 <  5:67187‑M1/133‑1 (MQ=255)                                                                                                              ccTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGACGGCGGCAAGGCGCTGCGCGAGATGGTGCCGGTGGTGCGCAAGCtgt                               >  7:284617/1‑149 (MQ=255)                                                                                                               cTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGACGGCGGCAAGGCGCTGCGCGAGATGGTGCCGGTGGTGCGCAAGCtgtg                              >  5:183613/1‑149 (MQ=255)                                                                                                               cTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGACGGCGGCAAGGCGCTGCGCGAGATGGTGCCGGTGGTGCGCAAGCtgtg                              >  1:311279/1‑149 (MQ=255)                                                                                                                  cTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGACGGCGGCAAGGCGCTGCGCGAGATGGTGCCGGTGGTGCGCAAGCTGTggg                            >  4:288402/1‑148 (MQ=255)                                                                                                                  cTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGACGGCGGCAAGGCGCTGCGCGAGATGGTGCCGGTGGTGCGCAAGCTGTgg                             <  1:186553/147‑1 (MQ=255)                                                                                                                   tCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGACGGCGGCAAGGCGCTGCGCGAGATGGTGCCGGTGGTGCGCAAGCTGTggg                            >  3:241522/1‑147 (MQ=255)                                                                                                                                 aaCGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGACGGCGGCAAGGCGCTGCGCGAGATGGTGCCGGTGGTGCGCAAGCTGTGGGAAGGCGACTACGCCCa            >  1:67447/1‑149 (MQ=255)                                                                                                                                      ccGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGACGGCGGCAAGGCGCTGCGCGAGATGGTGCCGGTGGTGCGCAAGCTGTGGGAAGGCGACTACGCCCacgacg       >  2:48867/1‑149 (MQ=255)                                                                                                                                         catGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGACGGCGGCAAGGCGCTGCGCGAGATGGTGCCGGTGGTGCGCAAGCTGTGGGAAGGCGACTACGCCCACGACGGTg    <  4:287228‑M2/146‑1 (MQ=255)                                                                                                                                           tGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGACGGCGGCAAGGCGCTGCGCGAGATGGTGCCGGTGGTGCGCAAGCTGTGGGAAGGCGACTACGCCCACGACGGTGaa  <  5:329944‑M2/148‑1 (MQ=255)                                                                                                                                            |                                                                                                                                                     CGATGCCGCTGCTGGCCTACCTGGCCGCGCGCACCGAGAAGATCCGCCTGGGCGCCGGCACCATCATTGCGCCGTTCTGGAACCCTATCCGCGTCGCTGGCGAATGCGCCCTGCTCGACGTGATCAGCAACGGCCGCATGGAAGTGGGCCTGGCCCGCGGTGCCTACCAG‑TTCGAGTTCGACCGCATGGCAGGTGGCATGCCGGCCACCGACGGCGGCAAGGCGCTGCGCGAGATGGTGCCGGTGGTGCGCAAGCTGTGGGAAGGCGACTACGCCCACGACGGTGAA  >  NC_002947/4139234‑4139520

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.