New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4880260 = | 47 (0.930) | 4 (0.080) | 4/242 | NT | 9.5% | coding (870/1341 nt) | PP_4289 | membrane protein |
? | NC_002947 | 4880298 = | 32 (0.680) | coding (908/1341 nt) | PP_4289 | membrane protein |
CGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCG > NC_002947/4880112‑4880402 | gcagcggcctgggccggtgcttgcgcaggtgcggcgggtgcttcggcagccttggcggcgtcctcggcacgctgctcggcagccgtcttgccgcctaccgcagttgccggcagcggctggtactcgatcttcgctgcggcttgctcagg < 5:15006‑M1/1‑1 (MQ=255) ccTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTAc < 1:205758/149‑1 (MQ=255) ccTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTAc > 4:102445/1‑149 (MQ=255) cctgggccggtgcttgcgcaggtgcggcgggtgcttcggcagccttggcggcgtcctcggcacgctgctcggcagccgtcttgccgcctaccgcagttgccggcagcggctggtactcgatcttcgctgcggcttgctcagGGCTTAc > 8:67964‑M1/142‑148 (MQ=255) cctgggccggtgcttgcgcaggtgcggcgggtgcttcggcagccttggcggcgtcctcggcacgctgctcggcagccgtcttgccgcctaccgcagttgccggcagcggctggtactcgatcttcgctgcggcttgctcagGGCTTAc < 7:67964‑M1/7‑1 (MQ=255) tACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGt > 2:296622/1‑149 (MQ=255) aggatcaGCCAGTTGTACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGt > 1:317677/7‑149 (MQ=255) aCGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGt > 6:332209/1‑148 (MQ=255) cGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTa > 1:36631/1‑149 (MQ=255) ccAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCtt > 8:73436/1‑137 (MQ=255) ccAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCtt < 7:73436/137‑1 (MQ=255) ccAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGcc > 6:15006/1‑149 (MQ=255) ccAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGcc > 2:189743/1‑149 (MQ=255) aaCTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAAcc > 1:131009/1‑149 (MQ=255) aaCTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAAcc > 6:24191/1‑149 (MQ=255) gcaggtgcggcgggtgcttcggcagccttggcggcgtcctcggcacgctgctcggcagccgtcttgccgcctaccgcagttgccggcagcggctggtactcgatcttcgctgcggcttgctcaggg < 6:252205‑M1/2‑1 (MQ=255) gCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGAtt < 6:174405/148‑1 (MQ=255) gCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCAGAAACCGAtt < 8:225045/148‑1 (MQ=255) tGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGcc < 1:189743/149‑1 (MQ=255) tGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCg < 1:49374/144‑1 (MQ=255) tGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCg > 2:49374/1‑144 (MQ=255) gCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGcc < 6:64003/148‑1 (MQ=255) ggTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGa < 4:71237/149‑1 (MQ=255) tATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGc < 8:90921/149‑1 (MQ=255) ttggcggcgtcctcggcacgctgctcggcagccgtcttgccgcctaccgcagttgccggcagcggctggtactcgatcttcgctgcggcttgctcagGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGa < 3:200078‑M1/42‑1 (MQ=255) ttggcggcgtcctcggcacgctgctcggcagccgtcttgccgcctaccgcagttgccggcagcggctggtactcgatcttcgctgcggcttgctcagGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGa > 4:200078‑M1/98‑139 (MQ=255) ccGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCg < 4:309938/149‑1 (MQ=255) gTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGAt < 2:131009/149‑1 (MQ=255) aTCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGa < 5:24191/146‑1 (MQ=255) tCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGa < 3:158980/124‑1 (MQ=255) tCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGa > 4:158980/1‑124 (MQ=255) cGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTAc > 7:14157/1‑147 (MQ=255) gctgctcggcagccgtcttgccgcctaccgcagttgccggcagcggctggtactcgatcttcgctgcggcttgctcagGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCt > 6:109467‑M1/79‑118 (MQ=255) gctgctcggcagccgtcttgccgcctaccgcagttgccggcagcggctggtactcgatcttcgctgcggcttgctcagGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCt < 5:109467‑M1/40‑1 (MQ=255) actTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTg > 1:151943/1‑149 (MQ=255) actTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCAGCAGCGAAGATCGAGTACCAGCCGCTg > 3:178990/1‑149 (MQ=255) cAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGcc < 4:178990/147‑1 (MQ=255) cAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCgg > 2:236377/1‑149 (MQ=255) aaCACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCgg < 4:64011/148‑1 (MQ=255) acCCGCCACGACAGCAACAAGTACGCCTGGACCCTGACCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGAAAGCCGCAGCGAAGATCGAGTACCATCCGCTGCAGGCAAc > 6:79387/1‑149 (MQ=255) ccGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTg < 1:296622/149‑1 (MQ=255) ccGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTg < 5:332209/149‑1 (MQ=255) acaaGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAggcggc > 3:219310/1‑146 (MQ=255) gTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACgg < 2:151943/149‑1 (MQ=255) tACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGc > 4:102137/1‑149 (MQ=255) cGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTg < 3:102445/149‑1 (MQ=255) cTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGc < 1:208464/76‑1 (MQ=255) cTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGc > 2:208464/1‑76 (MQ=255) cTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGcc > 8:13637/1‑148 (MQ=255) cTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCg > 2:202365/1‑149 (MQ=255) gCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAACCCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAACATCGACTACCAGCCGCTGCCGGCAACTGCGGTAGCCGCCAAGACGCCTGCCGAGCAGCCTg > 7:77606/1‑149 (MQ=255) ccGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGcc < 2:36631/149‑1 (MQ=255) cGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGcc > 5:128312/1‑148 (MQ=255) cGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCg < 2:317677/149‑1 (MQ=255) atCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTg < 8:104109/148‑1 (MQ=255) cTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGcc > 2:176631/1‑148 (MQ=255) cTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGcc > 5:226124/1‑148 (MQ=255) gCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCg > 3:9947/1‑147 (MQ=255) | CGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGCGCTCTGGCGATGATCTGCCTGGCTTACGTTACCGGCCCGAAACCGATTGCCGTAAGCCCTGAGCAAGCCGCAGCGAAGATCGAGTACCAGCCGCTGCCGGCAACTGCGGTAGGCGGCAAGACGGCTGCCGAGCAGCGTGCCGAGGACGCCGCCAAGGCTGCCG > NC_002947/4880112‑4880402 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |