New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5978800 =	67 (1.330)	3 (0.060)	3/250	NT	5.4%	coding (317/993 nt)	PP_5241	LuxR family transcriptional regulator
	?	NC_002947	5978907 =	41 (0.840)					coding (210/993 nt)	PP_5241	LuxR family transcriptional regulator

GGCAAACAAGTGGTGCGGGATGTCCTGCGAGCGCAACAGCCGGCCCAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCTTGCGCAGCAAGGACACCTGAACCTGCAAGTTATTGTCCTCGA  >  NC_002947/5978652‑5978941                                                                                                                                                     |                                                                                                                                              gccgatcctgttgggtgggcgtgctttcgacgtgctggccacgctgatcagggccaagggccgcgtggtcggcaaggacgagttgttcagccaggtgtggtccggcacggtggtcgaggacaataacttgcaggttcaggtgtccttgc                                                                                                                                               <  8:69787‑M1/1‑1 (MQ=255)   cAAACAAGTGGTGCGGGATGTCCTGCGAGCGCAACAGCCGGCCCAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTg                                                                                                                                             <  8:64685/149‑1 (MQ=255)    aaaCAAGTGGTGCGGGATGTCCTGCGAGCGCAACAGCCGGCCCAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGc                                                                                                                                            >  3:141494/1‑149 (MQ=255)       cAAGTGGTGCGGGATGTCCTGCGAGCGCAACAGCCGGCCCAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGccc                                                                                                                                          >  5:90763/1‑148 (MQ=255)           tggtgCGGGATGTCCTGCGAGCGCAACAGCCGGCCCAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGc                                                                                                                                     <  2:260283/149‑1 (MQ=255)               gCGGGATGTCCTGCGAGCGCAACAGCCGGCCCAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCa                                                                                                                                 >  1:79644/1‑149 (MQ=255)               gCGGGATGTCCTGCGAGCGCAACAGCCGGCCCAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCa                                                                                                                                 >  4:248532/1‑149 (MQ=255)                cGGGATGTCCTGCGAGCGCAACAGCCGGCCCAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCa                                                                                                                                 <  7:109112/148‑1 (MQ=255)                  ggATGTCCTGCGAGCGCAACAGCCGGCCCAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGTCAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCAc                                                                                                                                >  6:155532/1‑147 (MQ=255)                       tCCTGCGAGCGCAACAGCCGGCCCAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGctc                                                                                                                         >  6:253678/1‑149 (MQ=255)                       tCCTGCGAGCGCAACAGCCGGCACTACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCTGCACATTCACGCGCTCATCGAGCGGCTCGAGAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGctc                                                                                                                         <  1:99069/149‑1 (MQ=255)                         cTGCGAGCGCAACAGCCGGCCCAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGCCAGTCTCGGCCAGGCTGCGCAGCAACGAACTGCCCAATGCCTCCCCAGGctccg                                                                                                                       >  7:276689/1‑148 (MQ=255)                           gCGAGCGCAACAGCCGGCCCAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCAACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCg                                                                                                                     >  7:30397/1‑149 (MQ=255)                               gcgcAACAGCCGGCCCAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCAACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGc                                                                                                                 <  8:30397/149‑1 (MQ=255)                                   aaCAGCCGGCCCAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGAt                                                                                                             >  1:321095/1‑149 (MQ=255)                                   aaCAGCCGGCCCAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCAAGCGGCTCGACAGTCTCGGCCAGGCAGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCGCGAGGCTGAt                                                                                                             >  5:162446/1‑149 (MQ=255)                                         cGGCCCAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTgcgc                                                                                                       <  7:264648/149‑1 (MQ=255)                                                 cgcgGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGc                                                                                               <  5:253678/149‑1 (MQ=255)                                                    gtggcgcAGCTACGAGTCGTCATCCACCACCAACACCTGCACAATCACGAGCTCATCGAGCGGCTCGACAGTCTCGGCGAGGCTGCGCAGCTACGACCTGCCCAATGCCTGAGCAGGCTCCTCGAGGCTGTTCTGCGCGGCCAGGCGAt                                                                                            <  8:276689/146‑1 (MQ=255)                                                     gccaagggccgcgtggtcggcaaggacgagttgttcagccaggtgtggtccggcacggtggtcgaggacaataacttgcaggttcaggtgtccttgCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGa                                                                                             <  7:188977‑M1/51‑1 (MQ=255)                                                           aCCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCg                                                                                     >  8:252220/1‑149 (MQ=255)                                                           aCCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTAGGCCACGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGccccc                                                                                     >  5:229379/1‑148 (MQ=255)                                                             cgacgaGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGgc                                                                                   >  5:16638/1‑149 (MQ=255)                                                               acgaGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTg                                                                                                               <  2:160860/119‑1 (MQ=255)                                                               acgaGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTg                                                                                                               >  1:160860/1‑119 (MQ=255)                                                               acgaGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGgcgc                                                                                 >  7:69787/1‑149 (MQ=255)                                                                    tcgtcATCCACCACAAACACCGGAACATTCACGCGCTCATCGAGCGGCTCGACACTCTCGGCCAGGCTGCGCAGCAAAGACCTGCCCAATGCCTCACCAGCCAACTCAAGGCTGAACTGAGCGGCCAGCCGATAGCCCATCCGCGGAAc                                                                            >  2:243712/1‑149 (MQ=255)                                                                      gtcATCCACCACCAACACCGGCACATTCACGCGCTCATTGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACgg                                                                          >  4:63424/1‑149 (MQ=255)                                                                      gtcATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACgg                                                                          >  6:162386/1‑149 (MQ=255)                                                                         aTCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTGCACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCt                                                                       >  1:228183/1‑149 (MQ=255)                                                                         aTCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGaa                                                                             <  3:145080/143‑1 (MQ=255)                                                                         aTCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGaa                                                                             >  4:145080/1‑143 (MQ=255)                                                                          tCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTg                                                                      <  3:248532/149‑1 (MQ=255)                                                                          tCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTg                                                                      <  6:90763/149‑1 (MQ=255)                                                                            caccaccaACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGa                                                                    >  1:239910/1‑149 (MQ=255)                                                                            caacaccaACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGa                                                                    <  2:189192/146‑1 (MQ=255)                                                                               caccaACACCGGCACATTCACGCGCTCATCGAGCGGCTCGTCAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCa                                                                 <  5:155532/149‑1 (MQ=255)                                                                               caccaACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGa                                                                                             >  3:126562/1‑121 (MQ=255)                                                                               caccaACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGa                                                                                             <  4:126562/121‑1 (MQ=255)                                                                               caccaACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCa                                                                 <  6:244491/149‑1 (MQ=255)                                                                                accaACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAg                                                                >  2:27679/1‑149 (MQ=255)                                                                                 ccaACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGa                                                                                             <  1:231177/119‑1 (MQ=255)                                                                                 ccaACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGa                                                                                             >  2:231177/1‑119 (MQ=255)                                                                                 ccaACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCa                                                                 >  2:94431/1‑147 (MQ=255)                                                                                 ccaACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCa                                                                 <  1:94431/147‑1 (MQ=255)                                                                                          gCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCg                                                      >  2:161630/1‑149 (MQ=255)                                                                                              aTTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCa                                                   >  5:130372/1‑148 (MQ=255)                                                                                                   cgcgCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGcc                                             <  2:239910/149‑1 (MQ=255)                                                                                                    gcgcTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCt                                            <  7:252220/149‑1 (MQ=255)                                                                                                     cgcTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCtt                                           <  2:79644/149‑1 (MQ=255)                                                                                                         cATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCTTgcg                                        >  5:256594/1‑148 (MQ=255)                                                                                                          cacggtggtcgaggacaataacttgcaggttcaggtgtccttgCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCTTGCgca                                      >  2:99129‑M1/44‑149 (MQ=255)                                                                                                          aTCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCTTgcg                                        >  5:193018/1‑147 (MQ=255)                                                                                                             gAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCTTGCgcagc                                    <  1:73723/148‑1 (MQ=255)                                                                                                              aGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCTTGCGCAGCaa                                  <  6:193018/149‑1 (MQ=255)                                                                                                                 gtcgaggacaataacttgcaggttcaggtgtccttgCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCTTGCGCAGCAAgg                                >  8:188977‑M1/37‑148 (MQ=255)                                                                                                                   cTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCAGGGTCGCCAAAGGCCTTGCGCAGCAAGGaca                             <  1:27679/149‑1 (MQ=255)                                                                                                                    tCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCTTGCGCAGCAAGGacac                            >  2:259927/1‑149 (MQ=255)                                                                                                                    tCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCTTGCGCAGCAAGGacac                            >  6:80011/1‑149 (MQ=255)                                                                                                                      gACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATATCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGGCGCCAAAGGCCTTGCGCAGCAAGGACAcc                           <  5:283317/148‑1 (MQ=255)                                                                                                                      gACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGc                                                     >  4:224892/1‑122 (MQ=255)                                                                                                                      gACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGc                                                     <  3:224892/122‑1 (MQ=255)                                                                                                                      gACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCTTGCGCAGCAAGGACACCt                          >  4:190695/1‑149 (MQ=255)                                                                                                                          gTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCTTGCGCAGCAAGGACACCTGAAc                      <  1:161630/149‑1 (MQ=255)                                                                                                                           tctcGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCTTGCgcagc                                    <  5:303805/134‑1 (MQ=255)                                                                                                                           tctcGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCTTGCgcagc                                    >  6:303805/1‑134 (MQ=255)                                                                                                                           tctcGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCTTGCGCAGCAAGGACACCTGAAcc                     >  7:295396/1‑149 (MQ=255)                                                                                                                           tctcGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCTTGCGCAGCAAGGACACCTGAAcc                     <  2:321095/149‑1 (MQ=255)                                                                                                                           tctcGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCTTGCGCAGCAAGGACACCTGAAcc                     <  6:130372/149‑1 (MQ=255)                                                                                                                           tctcGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCAGGATCAGGCCACGGTCGCCAAAGGCCTTGCGCAGCAAGGACACCTGAAcc                     >  4:133168/1‑149 (MQ=255)                                                                                                                               ggCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCTTGCGCAGCAAGGACACCTGAACCt                    <  5:162386/146‑1 (MQ=255)                                                                                                                                gCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCTTGCGCAGCAAGGACACCTGAACCTGCaa                <  5:80011/149‑1 (MQ=255)                                                                                                                                              caACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCTTGCGCAGCAAGGACACCTGAACCTGCAAGTTATTGTCCTCGa  >  4:154011/1‑149 (MQ=255)                                                                                                                                                  gACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCTTGCGCAGCAAGGACACCTGAAc                      >  8:152905/1‑125 (MQ=255)                                                                                                                                                  gACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCTTGCGCAGCAAGGACACCTGAAc                      <  7:152905/125‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                              GGCAAACAAGTGGTGCGGGATGTCCTGCGAGCGCAACAGCCGGCCCAACGCGGTGCGCACCGACGAGTCGTCATCCACCACCAACACCGGCACATTCACGCGCTCATCGAGCGGCTCGACAGTCTCGGCCAGGCTGCGCAGCAACGACCTGCCCAATGCCTCACCAGGCTCCTCGAGGCTGATCTGCGCGGCCAGGCGATAGCCCCGGCGCGGAACGGTCTGGATCAGGCCACGGTCGCCAAAGGCCTTGCGCAGCAAGGACACCTGAACCTGCAAGTTATTGTCCTCGA  >  NC_002947/5978652‑5978941

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.