New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5980951 =	69 (1.370)	3 (0.060)	3/252	NT	4.4%	coding (1596/5049 nt)	PP_5242	GAF domain‑containing sensor histidine kinase
	?	NC_002947	5980990 =	62 (1.260)					coding (1635/5049 nt)	PP_5242	GAF domain‑containing sensor histidine kinase
Rejected: Frequency below/above cutoff threshold.

ACCTGCTGCTGATTTTCACCCGGTGCAACGATACGCCCACCACCAGCGCACCGCTGGCCATACCCGCAGCGGTGCGCAGCACCACGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGTTTTTCATCAACCAGATCCTCAGGGCCATGGTCGAAGACCAGCTGTTCATCTTCGACACCCAGGCCATGCGCTGGTCTTGGTGCCTG  >  NC_002947/5980803‑5981098                                                                                                                                                     |                                                                                                                                                    aCCTGCTGCTGATTTTCACCCGGTGCAACGATACGCCCACCACCAGCGCACCGCTGGCCATACCCGCAGCGGTGCGCAGCACCACGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGtt                                                                                                                                                     <  3:226072/149‑1 (MQ=255)  gcgacattgtcggagtagcagtgccgggccacggcctgcaggcaccaagaccagcgcatggcctgggtgtcgaagatgaacagctggtcttcgaccatggccctgaggatctggttgatgaaaaacgggttgcccgccgtcttgccaTg                                                                                                                                                    <  1:239836‑M1/2‑1 (MQ=255)        gctgATTTTCACCCGGTGCAACGATACGCCCACCACCAGCGCACCGCTGGCCATACCCGCAGCGGTGCGCAGCACCACGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGccccc                                                                                                                                               >  4:81680/1‑148 (MQ=255)              tttCACCCGGTGCAACGATACGCCCACCACCAGCGCACCGCTGGCCATACCCGCAGCGGTGCGCAGCACCACGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCg                                                                                                                                        >  6:152874/1‑149 (MQ=255)              tttCACCCGGTGCAACGATACGCCCACCACCAGCGCACCGCTGGCCATACCCGCAGCGGTGCGCAGCACCACGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCg                                                                                                                                        >  6:191264/1‑149 (MQ=255)                  aCCCGGTGCAACGATACGCCCACCACCAGCGCACCGCTGGCCATACCCGCAGCGGTGCGCAGCACCACGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCAt                                                                                                                                     <  8:287584/148‑1 (MQ=255)                    ccGGTGCAACGATACGCCCACCACCAGCGCACCGCTGGCCATACCCGCAGCGGTGCGCAGCACCACGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCAttt                                                                                                                                   >  3:211159/1‑148 (MQ=255)                    ccGGTGCAACGATACGCCCACCACCAGCGCACCGCTGGCCATACCCGCAGCGGTGCGCAGCACCACGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTc                                                                                                                                  <  5:152874/149‑1 (MQ=255)                    ccGGTGCAACGATACGCCCACCACCAGCGCACCGCTGGCCATACCCGCAGCGGTGCGCAGCACCACGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTc                                                                                                                                  <  3:245095/149‑1 (MQ=255)                           aaCGATACGCCCACCACCAGCGCACCGCTGGCCATACCCGCAGCGGTGCGCAGCACCACGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGc                                                                                                                           >  7:17189/1‑149 (MQ=255)                           aaCGATACGCCCACCACCAGCGCACCGCTGGCCATACACGCAGCGGTGCGCAGCACCACGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGc                                                                                                                           >  5:125450/1‑149 (MQ=255)                             cGATACGCCCACCACCAGCGCACCGCTGGCCATACCCGCAGCGGTGCGCAGCACCACGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGcc                                                                                                                          >  2:209138/1‑148 (MQ=255)                             cGATACGCCCACCACCAGCGCACCGCTGGCCATACCCGCAGCGGTGCGCAGCACCACGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGcc                                                                                                                          >  3:264434/1‑148 (MQ=255)                                tACGCCCACCACCAGCGCACCGCTGGCCATACCCGCAGCGGTGCGCAGCACCACGCTGAACCTGCGGCCGCTGGCCGTTGGGGGGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAAc                                                                                                                      <  4:238582/149‑1 (MQ=255)                                  cGCCCACCACCAGCGCACCGCTGGCCATACCCGCAGCGGTGCGCAGCACCACGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACgg                                                                                                                    <  1:33076/149‑1 (MQ=255)                                   gCCCACCACCAGCGCACCGCTGGCCATACCCGCAGCGGTGCGCAGCACCACGCTGAGCCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACggg                                                                                                                   >  3:62708/1‑149 (MQ=255)                                    cccACCACCAGCGCACCGCTGGCCATACCCGCAGCGGTGCGCAGCACCACGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGt                                                                                                                  <  7:17667/149‑1 (MQ=255)                                     ccaccaccaGCGCACCGCTGGCCATACCCGCAGCGGTGCGCAGCACCACGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCAt                                                                                                                                     <  4:187219/129‑1 (MQ=255)                                     ccaccaccaGCGCACCGCTGGCCATACCCGCAGCGGTGCGCAGCACCACGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCAt                                                                                                                                     >  3:187219/1‑129 (MQ=255)                                     ccaccaccaGCGCACCGCTGGCCATACCCGCAGCGGTGCGCAGCACCACGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTg                                                                                                                 >  3:222437/1‑149 (MQ=255)                                     ccaccaccaGCGCACCGCTGGCCATACCCGCAGCGGTGCGCAGCACCACGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTg                                                                                                                 <  7:6988/149‑1 (MQ=255)                                          ggcaccaagaccagcgcatggcctgggtgtcgaagatgtacagctggtcttcgaccatggccctgaggatctggttgatgaaaaacgggttgcccgccgtcttgccaTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATgg                                                                                                            >  6:164128‑M1/108‑149 (MQ=255)                                          accaGCGCACCGCTGGCCATACCCGCAGCGGTGCGCAGCACCACGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATgg                                                                                                            <  6:81084/149‑1 (MQ=255)                                          accaGCGCACCGCTGGCCATACCCGCAGCGGTGCGCAGCACCACGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATgg                                                                                                            <  4:211159/149‑1 (MQ=255)                                             aGCGCACCGCTGGCCATACCCGCAGCGGTGCGCAGCACCACGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCaa                                                                                                         <  2:51579/149‑1 (MQ=255)                                              gcgcACCGCTGGCCATACCCGCAGCGGTGCGCAGCACCACGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAg                                                                                                        <  5:191264/149‑1 (MQ=255)                                                gcACCGCTGGCCATACCCGCAGCGGTGCGCAGCACCACGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGAc                                                                                                      >  2:317337/1‑149 (MQ=255)                                                    ccagcgcatggcctgggtgtcgaagatgaacatctggtcttcgaccatggccctgaggatctggttgatgaaaaacgggttgcccgccgtcttgccaTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCAt                                                                                                              >  4:196159‑M1/98‑137 (MQ=255)                                                    ccagcgcatggcctgggtgtcgaagatgaacagctggtcttcgaccatggccctgaggatctggttgatgaaaaacgggttgcccgccgtcttgccaTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCAt                                                                                                              <  3:196159‑M1/40‑1 (MQ=255)                                                     gCTGGCCATACCCGCAGCGGTGCGCAGCACCACGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGAcggcgg                                                                                                 <  1:209138/149‑1 (MQ=255)                                                      cTGGCCATACCCGCAGCGGTGCGCAGCACCACGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCggg                                                                                                <  7:179826/149‑1 (MQ=255)                                                       tGGCCATACCCGCAGCGGTGCGCAGCACCACGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCggg                                                                                                >  7:12681/1‑148 (MQ=255)                                                         gCCATACCCGCAGCGGTGCGCAGCACCACGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGAcgg                                                                                                    <  8:28264/142‑1 (MQ=255)                                                         gCCATACCCGCAGCGGTGCGCAGCACCACGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGAcgg                                                                                                    >  7:28264/1‑142 (MQ=255)                                                                ccGCAGCGGTGCGCAGCACCACGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGttt                                                                                      >  4:5278/1‑149 (MQ=255)                                                                   cAGCGGTGCGCAGCACCACGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGTTTTtc                                                                                   <  8:17189/149‑1 (MQ=255)                                                                    aGCGGTGCGCAGCACCACGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGTTTTtca                                                                                  <  1:317337/149‑1 (MQ=255)                                                                    aGCGGTGCGCAGCACCACGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGTTTTtca                                                                                  >  5:159143/1‑149 (MQ=255)                                                                      cGGTGCGCAGCACCACGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGTTTTtcatc                                                                                <  3:5278/149‑1 (MQ=255)                                                                        gTGCGCAGCACCACGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGTTTTTCATCaa                                                                              >  5:176593/1‑149 (MQ=255)                                                                         tGCGCAGCACCACGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGTTTTTCATCAAc                                                                             >  1:42928/1‑149 (MQ=255)                                                                         tGCGCAGCACCACGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGTTTTTCATCAAc                                                                             <  4:264434/149‑1 (MQ=255)                                                                             cagcaCCACGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGTTTTTCATCAAc                                                                             >  3:119287/1‑145 (MQ=255)                                                                             cagcaCCACGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGTTTTTCATCAACCAGa                                                                         <  4:222437/149‑1 (MQ=255)                                                                                  ccacGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGTTTTTCATCAACCAGATCCt                                                                     >  1:17530/1‑148 (MQ=255)                                                                                    acGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGTTTTTCATCAACCAGATCCTCAg                                                                  >  6:62517/1‑149 (MQ=255)                                                                                          aaCCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGTTTTTCATCAACCAGATCCTCAGGGCCa                                                             <  6:125450/148‑1 (MQ=255)                                                                                            ccTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGTTTTTCATCAACCAGATCCTCAg                                                                  <  7:14857/141‑1 (MQ=255)                                                                                            ccTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGTTTTTCATCAACCAGATCCTCAg                                                                  >  8:14857/1‑141 (MQ=255)                                                                                            ccTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATAGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGTTTTTCATCAACCAGATCCTCAGGGCCATgg                                                          <  4:169678/149‑1 (MQ=255)                                                                                              tGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGTTTTtcatc                                                                                <  1:292571/125‑1 (MQ=255)                                                                                              tGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGTTTTtcatc                                                                                >  2:292571/1‑125 (MQ=255)                                                                                                       tGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGTTTTTCATCAACCAGATCCTCAGGGCCATGGTCGAAGACCAg                                               >  7:15518/1‑149 (MQ=255)                                                                                                         gCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGTTTTTCATCAACCAGATCCTCAGGGCCATGGTCGAAGACCAGCt                                             <  3:81680/149‑1 (MQ=255)                                                                                                           cGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGTTTTTCATCAACCAGATCCTCAGGGCCATGGTCGAAGACCAGCTGt                                           <  6:159143/149‑1 (MQ=255)                                                                                                           cGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGTTTTTCATCAACCAGATCCTCAGGGCCATGGTCGAAGACCAGCTGt                                           >  6:154282/1‑149 (MQ=255)                                                                                                            gTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGTTTTTCATCAACCAGATCCTCAGGGCCATGGTCGAAGACCAGCTGtt                                          >  2:293509/1‑149 (MQ=255)                                                                                                            gTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGTTTTTCATCAACCAGATCCTCAGGGCCATGGTCGAAGACCAGCTGtt                                          <  8:12681/149‑1 (MQ=255)                                                                                                             ttGGGGCGGGGGCCGAGCGGACTGGCGAGCGCCTCCCTGTTGCCCCCGCGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGTTTTTCATCCACCAGATCCTCAGGGCCATGGGCGAAGACCAGCTGTTc                                         <  4:62708/149‑1 (MQ=255)                                                                                                                 ggCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGTTTTTCATCAACCAGATCCTCAGGGCCATGGTCGAAGACCAGCTGTTCATCt                                     >  8:2062/1‑149 (MQ=255)                                                                                                                   cGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGTTTTTCATCAACCAGATCCTCAGGGCCATGGTCGAAGACCAGCTGTTCATCTTc                                   <  8:14634/149‑1 (MQ=255)                                                                                                                     gTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGTTTTTCATCAACCAGATCCTCAGGGCCATGGTCGAAGAc                                                  <  7:258530/132‑1 (MQ=255)                                                                                                                     gTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGTTTTTCATCAACCAGATCCTCAGGGCCATGGTCGAAGACCAGCTGTTCATCTTCGa                                 >  7:297749/1‑149 (MQ=255)                                                                                                                     gTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGTTTTTCATCAACCAGATCCTCAGGGCCATGGTAGAAGAc                                                  >  8:258530/1‑132 (MQ=255)                                                                                                                      tGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCTGGCAACCCGTTTTTCATCAACCAGATCCTCAGGGCCATGGTCGAAGACCAGCTg                                            <  1:246043/137‑1 (MQ=255)                                                                                                                      tGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGTTTTTCATCAACCAGATCCTCAGGGCCATGGTCGAAGACCAGCTg                                            >  2:246043/1‑137 (MQ=255)                                                                                                                                 aTTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGTTTTTCATCAACCAGATCCTCAGGGCCATGGTCGAAGACCAGCTGTTCATCTTCGACACCCAGGcctt                     <  5:154282/149‑3 (MQ=255)                                                                                                                                      cGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGTTTTTCATCAACCAGATCCTCAGGGCCATGGTCGAAGACCAGCTGTTCATCTTCGACACCCAg                          >  5:193560/1‑139 (MQ=255)                                                                                                                                      cGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGTTTTTCATCAACCAGATCCTCAGGGCCATGGTCGAAGACCAGCTGTTCATCTTCGACACCCAg                          <  6:193560/139‑1 (MQ=255)                                                                                                                                         gcgcTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGTTTTTCATCAACCAGATCCTCAGGGCCATGGTCGAAGACCAGCTGTTCATCTTCGACACCCAGGCCATGCGCTGGt             <  2:17530/149‑1 (MQ=255)                                                                                                                                          cgcTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGTTTTTCATCAACCAGATCCTCAGGGCCATGGTCGAAGACCAGCTGTTCATCTTCGACACCCAg                          >  3:210405/1‑135 (MQ=255)                                                                                                                                          cgcTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGTTTTTCATCAACCAGATCCTCAGGGCCATGGTCGAAGACCAGCTGTTCATCTTCGACACCCAg                          <  4:210405/135‑1 (MQ=255)                                                                                                                                             ttCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGTTTTTCATCAACCAGATCCTCAGGGCCATGGTCGAAGACCAGCTGTTCATCTTCGACACCCAGGCCATGCGCTGGTCTTg         >  4:138137/1‑149 (MQ=255)                                                                                                                                             ttCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGTTTTTCATCAACCAGATCCTCAGGGCCATGGTCGAAGACCAGCTGTTCATCTTCGACACCCAGGCCATGCGCTGGTCTTg         >  4:142969/1‑149 (MQ=255)                                                                                                                                                    ttGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGTTTTTCATCAACCAGATCCTCAGGGCCATGGTCGAAGACCAGCTGTTCATCTTCGACACCCAGGCCATGCGCTGGTCTTGGTGCCTg  <  7:146247/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                    ACCTGCTGCTGATTTTCACCCGGTGCAACGATACGCCCACCACCAGCGCACCGCTGGCCATACCCGCAGCGGTGCGCAGCACCACGCTGAACCTGCGGCCGCTGGCCGTTGGGGCGGTGGCCGAGCTGATTGGCGAGCGCTTCCATGTTGCCCCCGAGGCCGCATTTCAACTGGCCGAACGGGTGCATGGCAAGACGGCGGGCAACCCGTTTTTCATCAACCAGATCCTCAGGGCCATGGTCGAAGACCAGCTGTTCATCTTCGACACCCAGGCCATGCGCTGGTCTTGGTGCCTG  >  NC_002947/5980803‑5981098

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.