New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 136826	65 (1.290)	5 (0.100)	4/248	NT	7.0%	coding (711/789 nt)	amiD	1,6‑anhydro‑N‑acetylmuramyl‑L‑alanine amidase
	?	NC_002947	= 136859	70 (1.450)					coding (744/789 nt)	amiD	1,6‑anhydro‑N‑acetylmuramyl‑L‑alanine amidase

ACCCGCCAAGCGTTGGCTGGTACCAGCAGGAGCTGGCACGGTTTGGCTATCAGATCGAGCAGACCGGCGTGCTGGATGTCGCCACACGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCCTTGCGCTGCGAAGAGGCGAGTTGGGTCGACGCAGTTGTATCGACTTAACGGTCGCATCGCAGCCA  >  NC_002947/136711‑137001                                                                                                                                                     |                                                                                                                                               aCCCGCCAAGCGTTGGCTGGTACCAGCAGGAGCTGGCACGGTTTGGCTATCAGATCGAGCAGACCGGCGTGCTGGATGTCGCCACACGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGAt                                                                                                                                                >  3:16502/1‑149 (MQ=255) aCCCGCCAAGCGTTGGCTGGTACCAGCAGGAGCTGGCACGGTTTGGCTATCAGATCGAGCAGACCGGCGTGCTGGATGTCGCCACACGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGAt                                                                                                                                                <  6:229151/149‑1 (MQ=255)  cccGCCAAGCGTTGGCTGGTACCAGCAGGAGCTGGCACGGTTTGGCTATCAGATCGAGCAGACCGGCGTGCTGGATGTCGCCACACGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATg                                                                                                                                               <  7:33263‑M2/149‑2 (MQ=255)   ccGCCAAGCGTTGGCTGGTACCAGCAGGCGCTGTCACGGTTTTGCTATCAGATCGAGCAGACGTGCGTGCTGGATGTCGCCACACGTCATGTGGTCGCCGCCTTCCTGATGCGCTTCCGCCCGCAGCTCTTCTACGTTATGCCGGAttc                                                                                                                                              <  2:289795/149‑3 (MQ=255)                       ccAGCAGGAGCTGGCACGGTTTGGCTATCAGATCGAGCAGACCGGCGTGCTGGATGTCGCCACACGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGAtgctgc                                                                                                                          <  3:38870/149‑1 (MQ=255)                       ccAGCAGGAGCTGGCACGGTTTGGCTATCAGATCGAGCAGACCGGCGTGCTGGATGTCGCCACACGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGAtgctg                                                                                                                           <  7:233617/148‑1 (MQ=255)                            agGAGCTGGCACGGTTTGGCTATCAGATCGAGCAGACCGGCGTGCTGGATGTCGCCACACGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGt                                                                                                                      >  1:299571/1‑148 (MQ=255)                             ggAGCTGGCACGGTTTGGCTATCAGATCGAGCAGACCGGCGTGCTGGATGTCGCCACACGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTAc                                                                                                                    <  4:16502/149‑1 (MQ=255)                              gAGCTTGCACGGTTTGGCTATCAGATCGAGCAGACCGTCGTGCTGGATGTCGCCACACGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATTCGCAGACAGCAGCGATGCTGCAGGTACt                                                                                                                   <  5:246151/149‑1 (MQ=255)                                    gCACGGTTTGGCTATCAGATCGAGCAGACCGGCGTGCTGGATGTCGCCACACGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCg                                                                                                             >  6:50812/1‑149 (MQ=255)                                      aCGGTTTGGCTATCAGATCGAGCAGACCGGCGTGCTGGATGTCGCCACACGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCa                                                                                                           >  5:86938/1‑149 (MQ=255)                                      aCGGTTTGGCTATCAGATCGAGCAGACCGGCGTGCTGGATGTCGCCACACGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCa                                                                                                           >  3:84780/1‑149 (MQ=255)                                      aCGGTTTGGCTATCAGATCGAGCAGACCGGCGTGCTGGATGTCGCCACACGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCa                                                                                                           >  5:113711/1‑149 (MQ=255)                                              gCTATCAGATCGAGCAGACCGGCGTGCTGGATGTCGCCACACGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGa                                                                                                   <  2:299571/149‑1 (MQ=255)                                                   cAGATCGAGCAGACCGGCGTGCTGGATGTCGCCACACGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCAc                                                                                              >  5:60046/1‑149 (MQ=255)                                                     gATCGAGCAGACCGGCGTGCTGGATGTCGCCACACGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCAcgg                                                                                            >  8:252066/1‑149 (MQ=255)                                                          aGCAGACCGGCGTGCTGGATGTCGCCACACGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACggcgggc                                                                                       >  1:169421/1‑149 (MQ=255)                                                           gCAGACCGGCGTGCTGGATGTCGCCACACGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCg                                                                                                                                 >  2:162841/1‑106 (MQ=255)                                                           gCAGACCGGCGTGCTGGATGTCGCCACACGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCg                                                                                                                                 <  1:162841/106‑1 (MQ=255)                                                             aGACCGGCGTGCTGGATGTCGCCACACGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGcgggcggg                                                                                    <  6:86938/149‑1 (MQ=255)                                                               aCCGGCGTGCTGGATGTCGCCACACGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATgcgc                                                                                                                                            >  2:190161‑M2/1‑87 (MQ=255)                                                               aCCGGCGTGCTGGATGTCGCCACACGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATgcgc                                                                                                                                            <  1:190161‑M2/91‑5 (MQ=255)                                                                   gCGTGCTGGATGTCGCCACACGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCtt                                                                              >  4:125004/1‑149 (MQ=255)                                                                     gTGCTGGATGTCGCCACACTTCATGTGCTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCttgt                                                                            <  6:220661/149‑1 (MQ=255)                                                                      tGCTGGATGTCGCCACACGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCttgtt                                                                           <  7:252066/149‑1 (MQ=255)                                                                      tGCTGGATGTCGCCACACGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCttgtt                                                                           <  2:169421/149‑1 (MQ=255)                                                                       gCTGGATGTCGCCACACGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCttgttg                                                                          >  5:174426/1‑149 (MQ=255)                                                                        cTGGATGTCGCCACACGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACt                                                                                                                   >  5:322920/1‑107 (MQ=255)                                                                        cTGGATGTCGCCACACGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACt                                                                                                                   <  6:322920/107‑1 (MQ=255)                                                                        cTGGATGTCGCCACACGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAAcc                                                                                                              <  6:248060/112‑1 (MQ=255)                                                                        cTGGATGTCGCCACACGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAAcc                                                                                                              >  5:248060/1‑112 (MQ=255)                                                                        cTGGATGTCGCCACACGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGc                                                                         <  3:38035/149‑1 (MQ=255)                                                                          ggATGTCGCCACACGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCa                                                                        >  8:269014/1‑148 (MQ=255)                                                                             tGTCGCCACACGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGcgggcggg                                                                                    <  4:47390/133‑1 (MQ=255)                                                                             tGTCGCCACACGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGcgggcggg                                                                                    >  3:47390/1‑133 (MQ=255)                                                                               tCGCCACACGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCC                                                                   <  3:145394‑M1/148‑1 (MQ=255)                                                                                 gCCACACGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCCTTG                                                                <  7:86974‑M1/149‑1 (MQ=255)                                                                                 gCCACACGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCCTTG                                                                <  4:84780‑M1/149‑1 (MQ=255)                                                                                 gCCACACGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCCTTG                                                                >  5:188724‑M1/1‑149 (MQ=255)                                                                                 gCCACACGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCCTTG                                                                >  3:261327‑M1/1‑149 (MQ=255)                                                                                    acacGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGAATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCCTTgcgc                                                             >  8:178927/1‑149 (MQ=255)                                                                                       cGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCCTT                                                                 >  1:149587‑M1/1‑142 (MQ=255)                                                                                       cGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCCTT                                                                 <  2:149587‑M1/142‑1 (MQ=255)                                                                                         tCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTACAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCCTTGCGCTGCg                                                         >  4:197568/1‑148 (MQ=255)                                                                                            tgtgGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAg                                                                                                  >  6:197938/1‑104 (MQ=255)                                                                                            tgtgGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAg                                                                                                  <  5:197938/104‑1 (MQ=255)                                                                                              tgGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGAGGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCCTTGCGCTGCGAagag                                                    <  5:50812/148‑1 (MQ=255)                                                                                              tgGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCAcg                                                                                             >  4:266790/1‑107 (MQ=255)                                                                                              tgGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCAcg                                                                                             <  3:266790/107‑1 (MQ=255)                                                                                              tgGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCCTTGCGCTGCGAagag                                                    <  6:113711/148‑1 (MQ=255)                                                                                                gTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCCTTgc                                                               >  4:309228/1‑135 (MQ=255)                                                                                                gTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCCTTgc                                                               <  3:309228/135‑1 (MQ=255)                                                                                                gTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCCTTGCGCTGCGAAGAGGc                                                  <  8:241618/148‑1 (MQ=255)                                                                                                 tCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCCTTGCGCTGCGAAGAGGc                                                  >  4:78749/1‑147 (MQ=255)                                                                                                 tCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCCTTGCGCTGCGAAGAGGc                                                  >  8:100857/1‑147 (MQ=255)                                                                                                 tCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCCTTGCGCTGCGAAGAGGc                                                  >  7:135617/1‑147 (MQ=255)                                                                                                    ccgcaTTCCAGATTCGCTTCGGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCTGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGAAATGCCTTGCGCTGCGAAGAGGCGAGtt                                             <  8:135617/149‑1 (MQ=255)                                                                                                      gccTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCCTTGCGCTGCGAAGAGGCGAGTTgg                                           <  6:174426/149‑1 (MQ=255)                                                                                                      gccTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCCTTGCGCTGCGAAGAGGCGAGTTgg                                           <  6:60046/149‑1 (MQ=255)                                                                                                       ccTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCCTTGCGCTGCGAAGAGGCGAGTTggg                                          <  7:100857/149‑1 (MQ=255)                                                                                                        cTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCCTTGCGCTGCGAAGAGGCGAGTTGGGt                                         >  8:180270/1‑149 (MQ=255)                                                                                                          tCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATgcgcatctggaaggcggcgaccacatgacgtgtggcgacatccagcacgccggtctgctcgatctgatagccaaaccgtgccagctcctgctggtaccagccaac                                       <  6:205707‑M2/149‑106 (MQ=255)                                                                                                          tCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCCTTGCGCt                                                            <  1:159368/128‑1 (MQ=255)                                                                                                          tCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCCTTGCGCt                                                            >  2:159368/1‑128 (MQ=255)                                                                                                            cAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCCTTGCGCTGCGAAGAGGCGAGTTGGGTCGAc                                     <  6:188724/149‑1 (MQ=255)                                                                                                              gATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCCTTGCGCTGCGAAGAGGCGAGTTGGGTCGa                                      >  1:264317/1‑146 (MQ=255)                                                                                                              gATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCCTTGCGCTGCGAAGAGGCGAGTTGGGTCGa                                      <  2:264317/146‑1 (MQ=255)                                                                                                               aTGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATgcgcatctggaaggcggcgaccacatgacgtgtggcgacatccagcacgccggtctgctcgatctgatagccaaaccgtgccagctcctgctggtaccagccaacgcttg                                  <  3:165451‑M2/149‑111 (MQ=255)                                                                                                                tGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATgcgcatctggaaggcggcgaccacatgacgtgtggcgacatccagcacgccggtctgctcgatctgatagccaaaccgtgccagctcctgctggtaccagccaacgcttgg                                 <  8:17543‑M2/149‑112 (MQ=255)                                                                                                                tGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATgcgcatctggaaggcggcgaccacatgacgtgtggcgacatccagcacgccggtctgctcgatctgatagccaaaccgtgccagctcctgctggtaccagccaacgcttgg                                 <  2:315941‑M2/149‑112 (MQ=255)                                                                                                                tGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCCTTGCGCTGCGAAGAGGCGAGTTGGGTCGACGCAg                                 <  3:78749/149‑1 (MQ=255)                                                                                                                  cgcTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCCTTGCGCTGCGAAGAGGCGAGTTGGGTCGACGCAGt                                <  3:125004/148‑1 (MQ=255)                                                                                                                   tcTTACGACCGAAGCGCTTCGACGGAATGCCCGATGCGAAGACAGCAGCGATGCTGCAGCAACTTAACCCAATGCATACAGTCACGGCCGGCGGGGTCCTTGTTGCAAAGCCTTGCGCTGCGAAGAGGCGAGTTGGGTCGACGCAGTTg                              >  4:252287/2‑149 (MQ=255)                                                                                                                   gcTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATgcgcatctggaaggcggcgaccacatgacgtgtggcgacatccagcacgccggtctgctcgatctgatagccaaaccgtgccagctcctgctggtaccagccaacgcttggcgg                              >  1:315941‑M2/1‑35 (MQ=255)                                                                                                                        cgcccgcAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCCTTGCGCTGCGAAGAGGCGAGTTGGGTCGACGCAGTTGTATc                          <  7:269014/148‑1 (MQ=255)                                                                                                                         gcccgcAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCCTTGCGCTGCGAAGAGGCGAGTTGGGTCGACGCAGTTGTATCGa                        >  5:116515/1‑149 (MQ=255)                                                                                                                             gcAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCttgtt                                                                           >  3:87554/1‑94 (MQ=255)                                                                                                                             gcAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCttgtt                                                                           <  4:87554/94‑1 (MQ=255)                                                                                                                                 cgcTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCCTTGCGCTGCGAAGAGGCGAGTTGGGTCGACGCAGTTGTATCg                         <  1:315137/140‑1 (MQ=255)                                                                                                                                 cgcTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCCTTGCGCTGCGAAGAGGCGAGTTGGGTCGACGCAGTTGTATCg                         >  2:315137/1‑140 (MQ=255)                                                                                                                                   cTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCCTTGtggctgcgatgcgaccgttaagtcgatacaactgcgtcgacccaactcgc              >  2:74605‑M1/1‑99 (MQ=255)                                                                                                                                   cTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCCTTGCGCTGCGAAGAGGCGAGTTGGGTCGACGCAGTTGTATCGACTTAACGGtc              <  7:180270/149‑1 (MQ=255)                                                                                                                                    ttCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCCTTGCGCTGCGaa                                                       >  6:312287/1‑107 (MQ=255)                                                                                                                                      cGACGGTATGCCGTATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGGGGGGTCGTTGTTGCAAAGCCTTGCGCTGCGAag                                                      <  1:43965/106‑1 (MQ=255)                                                                                                                                         cGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCCTTGCGCTGCGAAGAGGCGAGTTGGGTCGACGCAGTTGTATCGACTTAACGGtcgcatcg        <  4:261327/149‑1 (MQ=255)                                                                                                                                         cGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCCTTGCGCTGCGAAGAGGCGAGTTGGGTCGACGCAGTTGTATCGACTTAACGGtcgcatcg        >  8:66236/1‑149 (MQ=255)                                                                                                                                          ggTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCCTTGCGCTGCGAAGAGGCGAGTTGGGTCGACGCAGTTGTATCGACTTAACGGtcgcatcgc       <  6:116515/149‑1 (MQ=255)                                                                                                                                              tGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCCTTGCGCTGCGAAGAGGCGAGTTGGGTCGACGCAGTTGTATCGACTTAACGGTCGCATCGCAGc    <  8:85721/148‑1 (MQ=255)                                                                                                                                                ccGGATGCGCAGACAGCAGCGATGCTACAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCCTTGCGCTGCGAAGAGGCGAGTTGGGTCGACGCAGTTGTATCGACTTAACGGTCGCATCGCAGCca  <  3:197568/148‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                               ACCCGCCAAGCGTTGGCTGGTACCAGCAGGAGCTGGCACGGTTTGGCTATCAGATCGAGCAGACCGGCGTGCTGGATGTCGCCACACGTCATGTGGTCGCCGCCTTCCAGATGCGCTTCCGCCCGCAGCGCTTCGACGGTATGCCGGATGCGCAGACAGCAGCGATGCTGCAGGTACTTAACCGCATGCGTTGAGTCACGGCGGGCGGGGTCCTTGTTGCAAAGCCTTGCGCTGCGAAGAGGCGAGTTGGGTCGACGCAGTTGTATCGACTTAACGGTCGCATCGCAGCCA  >  NC_002947/136711‑137001

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.