New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3606080	44 (0.870)	5 (0.100)	5/246	NT	9.4%	coding (682/951 nt)	PP_3181	site‑specific recombinase
	?	NC_002947	= 3606131	54 (1.120)					coding (631/951 nt)	PP_3181	site‑specific recombinase

GAGTGGCCGGTATACAGCGCCGCCGGCACCCCGGCGCGTTCCAGCATGCGCCGCAGCAGGCCCACCAGGCTGTTGCTGTTGAGCGCGTTGTCGCCAAGGTTGCCCCAGCGGTC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGAGGGCAGGGGTGCGGTGCTGGACGCCCAAGGCTTCGCGGTCGCCCTTGCTGCGCGGCAGGAAAAGCGTAATGCCGACACCGGCTTGCGCCTGGA  >  NC_002947/3605986‑3606274                                                                                                                                                       |                                                                                                                                                gAGTGGCCGGTATACAGCGCCGCCGGCACCCCGGCGCGTTCCAGCATGCGCCGCAGCAGGCCCACCAGGCTGTTGCTGTTGAGCGCGTTGTCGCCAAGGTTGCCCCAGCGGTC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCggc                                                                                                                                              >  3:121148‑M2/1‑146 (MQ=255)   gTGGCCGGTATACAGCGCCGCCGGCACCCCGGCGCGTTCCAGCATGCGCCGCAGCAGGCCCACCAGGCTGTTGCTGTTGAGCGCGTTGTCGCCAAGGTTGCCCCAGCGGTC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCggcga                                                                                                                                            <  5:113765‑M2/149‑6 (MQ=255)      gCCGGTATACAGCGCCGCCGGCACCCCGGCGCGTTCCAGCATGCGCCGCAGCAGGCCCACCAGGCTGTTGCTGTTGAGCGCGTTGTCGCCAAGGTTGCCCCAGCGGTC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCGGCGACtt                                                                                                                                         <  6:83121/149‑1 (MQ=255)      gCCGGTATACAGCGCCGCCGGCACCCCGGCGCGTTCCAGCATGCGCCGCAGCAGGCCCACCAGGCTGTTGCTGTTGAGCGCGTTGTCGCCAAGGTTGCCCCAGCGGTC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCGGCGACtt                                                                                                                                         >  6:266458/1‑149 (MQ=255)          gTATACAGCGCCGCCGGCACCCCGGCGCGTTCCAGCATGCGCCGCAGCAGGCCCACCAGGCTGTTGCTGTTGAGCGCGTTGTCGCCAAGGTTGCCCCAGCGGTC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCGGCGACTTCAAg                                                                                                                                     <  1:27305/149‑1 (MQ=255)              aCAGCGCCGCCGGCACCCCGGCGCGTTCCAGCATGCGCCGCAGCAGGCCCACCAGGCTGTTGCTGTTGAGCGCGTTGTCGCCAAGGTTGCCCCAGCGGTC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCGGCGACTTCAAGcttt                                                                                                                                 >  6:86687/1‑146 (MQ=255)               cAGCGCCGCCGGCACCCCGGCGCGTTCCAGCATGCGCCGCAGCAGGCCCACCAGGCTGTTGCTGTTGAGCGCGTTGTCGCCAAGGTTGCCCCAGCGGTC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCGGCGACTTCAAGCCAtt                                                                                                                                >  7:304446/1‑149 (MQ=255)                   gccgccGGCACCCCGGCGCGTTCCAGCATGCGCCGCAGCAGGCCCACCAGGCTGTTGCTGTTGAGCGCGTTGTCGCCAAGGTTGCCCCAGCGGTC‑‑GAGTTTGCGGA‑CCACCGGC‑‑CCATGGGCAATACCGGCGACTTCAAGCCATTGCAg                                                                                                                            >  5:327006/1‑149 (MQ=255)                    ccgccgGCACCCCGGCGCGTTCCAGCATGCGCCGCAGCAGGCCCACCAGGCTGTTGCTGTTGAGCGCGTTGTCGCCAAGGTTGCCCCAGCGGTC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCGGCGACTTCAAGCCATTGCAgg                                                                                                                           >  4:99375/1‑149 (MQ=255)                             ccccGGCGCGTTCCAGCATGCGCCGCAGCAGGCCCACCAGGCTGTTGCTGTTGAGCGCGTTGTCGCCAAGGTTGCCCCAGCGGTC‑‑GAGTTTGCGGAGACACCGGC‑‑CCATGGGCAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGt                                                                                                                   <  1:84298/149‑1 (MQ=255)                             ccccGGCGCGTTCCAGCATGCGCCGCAGCAGGCCCACCAGGCTGTTGCTGTTGAGCGCGTTGTCGCCAAGGTTGCCCCAGCGGTC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTg                                                                                                                  <  8:304446/149‑1 (MQ=255)                                   cgcgTTCCAGCATGCGCCGCAGCAGGCCCACCAGGCTGTTGCTGTTGAGCGCGTTGTCGCCAAGGTTGCCCCAGCGGTC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAggg                                                                                                            <  6:176176/149‑1 (MQ=255)                                         ccAGCATGCGCCGCAGCAGGCCCACCAGGCTGTTGCTGTTGAGCGCGTTGTCGCCAAGGTTGCCCCAGCGGTC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAg                                                                                                      >  5:75254/1‑149 (MQ=255)                                          cAGCATGCGCCGCAGCAGGCCCACCAGGCTGTTGCTGTTGAGCGCGTTGTCGCCAAGGTTGCCCCAGCGGTC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCgg                                                                                                                                               >  8:127888‑M2/1‑105 (MQ=255)                                          cAGCATGCGCCGCAGCAGGCCCACCAGGCTGTTGCTGTTGAGCGCGTTGTCGCCAAGGTTGCCCCAGCGGTC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCgg                                                                                                                                               <  7:127888‑M2/107‑3 (MQ=255)                                            gCATGCGCCGCAGCAGGCCCACCAGGCTGTTGCTGTTGAGCGCGTTGTCGCCAAGGTTGCCCCAGCGGTC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGcc                                                                                                   >  5:82517/1‑149 (MQ=255)                                              aTGCGCCGCAGCAGGCCCACCAGGCTGTTGCTGTTGAGCGCGTTGTCGCCAAGGTTGCCCCAGCGGTCGAGAGGAGGCGGA‑ACACCGGCTGCCATGGGCAATACCGGCGACTTCAAGCCATTGCAGTTAGGCAGTGACAGGGCACAAgg                                                                                                     >  1:100208/1‑149 (MQ=255)                                                 cgccgcAGCAGGCCCACCAGGCTGTTGCTGTTGAGCGCGTTGTCGCCAAGGTTGCCCCAGCGGTC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGa                                                                                               <  4:194963/148‑1 (MQ=255)                                                 cgccgcAGCAGGCCCACCAGGCTGTTGCTGTTGAGCGCGTTGTCGCCAAGGTTGCCCCAGCGGTC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGa                                                                                               <  6:24208/148‑1 (MQ=255)                                                              ccaccaGGCTGTTGCTGTTGAGCGCGTTGTCGCCAAGGTTGCCCCAGCGGTC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGAGGGCAg                                                                                         <  5:162322/141‑1 (MQ=255)                                                              ccaccaGGCTGTTGCTGTTGAGCGCGTTGTCGCCAAGGTTGCCCCAGCGGTC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGAGGGCAg                                                                                         >  6:162322/1‑141 (MQ=255)                                                              ccaccaGGCTGTTGCTGTTGAGCGCGTTGTCGCCAAGGTTGCCCCAGCGGTC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGAGGGCAGGggtgcgg                                                                                 <  1:252358/149‑1 (MQ=255)                                                              ccaccaGGCTGTTGCTGTTGAGCGCGTTGTCGCCAAGGTTGCCCCAGCGGTC‑‑GAGTTTACGGA‑ACACCGGC‑‑CCATGGGCAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGAGGGCAGGggtgcgg                                                                                 >  6:71685/1‑149 (MQ=255)                                                               caccaGGCTGTTGCTGTTGAGCGCGTTGTCGCCAAGGTTGCCCCAGCGGTC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGAGGGCAGGggtgcggt                                                                                >  7:138908/1‑149 (MQ=255)                                                                 ccaGGCTGTTGCTGTTGAGCGCGTTGTCGCCAAGGTTGCCCCAGCGGTC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGAGGGCAGGggtgcggtgc                                                                              <  6:327006/149‑1 (MQ=255)                                                                      ctgttgctgttgAGCGCGTTGTCGCCAAGGTTGCCCCAGCGGTC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGAGGGCAGGGGTGCGGTGCTGGAc                                                                         <  2:100208/149‑1 (MQ=255)                                                                          tgctgttgAGCGCGTTGTCGCCAAGGTTGCCCCAGCGGTC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGAGGGCAGGGGTGCGGTGCTGGACGcc                                                                      >  2:255421/1‑148 (MQ=255)                                                                                  aGCGCGTTGTCGCCAAGGTTGCCCCAGCGGTC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGAGGGCAGGGGTGCGGTGCTGGACGCCCAAGGCTTc                                                             <  5:266458/149‑1 (MQ=255)                                                                                      cgTTGTCGCCAAGGTTGCCCCAGCGGTC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCggcgacaacgcgctcaacagcaacagcctggtgggcctgctgcggcgcatgctggaacgcgccggggtgccggcggcgctgtataccg                                                         <  5:93850‑M2/149‑89 (MQ=255)                                                                                       gTTGTCGCCAAGGTTGCCCCAGCGGTC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCggcgacaacgcgctcaacagcaacagcctggtgggcctgctgcggcgcatgctggaacgcgccggggtgccggcggcgctgtataccgg                                                        <  1:161470‑M2/149‑90 (MQ=255)                                                                                        ttGTCGCCAAGGTTGCCCCAGCGGTC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCggcgacaacgcgctcaacagcaacagcctggtgggcctgctgcggcgcatgctggaacgcgccggggtgccggcggcgctgtataccggc                                                       <  2:185054‑M2/149‑91 (MQ=255)                                                                                             gCCAAGGTTGCCCCAGCGGTC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCt                                                                                                  >  6:99841/1‑101 (MQ=255)                                                                                             gCCAAGGTTGCCCCAGCGGTC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCt                                                                                                  <  5:99841/101‑1 (MQ=255)                                                                                              ccAAGGTTGCCCCAGCGGTC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGAGGGCAgg                                                                                        >  4:105059/1‑110 (MQ=255)                                                                                              ccAAGGTTGCCCCAGCGGTC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGAGGGCAgg                                                                                        <  3:105059/110‑1 (MQ=255)                                                                                               cAAGGTTGCCCCAGCGGTC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGAGGGCAGGGGTGCGGTGCTGGACGCCCAAGGCTTCGCGGTCGCCCTtg                                                <  8:138908/149‑1 (MQ=255)                                                                                                      gCCCCAGCGGTC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGAGGGCAGGGGTGCGGTGCTGGACGCCCAAGGCTTCGCGGTCGCCCTTGCTGcgcg                                         >  2:57579/1‑149 (MQ=255)                                                                                                        cccAGCGGTC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGAGGGCAGGGGTGCGGTGCTGGACGCCCAAGGCTTCGCGGTCGCCCTTGCTGCGCgg                                        >  8:183745/1‑148 (MQ=255)                                                                                                        cccAGCGGTC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGAGGGCAGGGGTGCGGTGCTGGACGCCCAAGGCTTCGCGGTCGCCCTTGCTGCGCgg                                        >  3:273551/1‑148 (MQ=255)                                                                                                         ccAGCGGTC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGAGGGCAggg                                                                                       >  8:191663/1‑100 (MQ=255)                                                                                                         ccAGCGGTC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGAGGGCAGGGGTGCGGTGCTGGACGCCCAAGGCTTCGCGGTCGCCCTTGCTGCGCGGCa                                      <  6:113765/149‑1 (MQ=255)                                                                                                           aGCGGTC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGAGGGCAGGGGTGCGGTGCTGGACGCCCAAGGCTTCGCGGTCGCCCTTGCTGCGCGGCAg                                     >  5:161550/1‑148 (MQ=255)                                                                                                             cGGTC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCggcgacaacgcgctcaacagcaacagcctggtgggcctgctgcggcgcatgctggaacgcgccggggtgccggcggcgctgtataccggccactcgctacggcgtggcttc                                  >  6:93850‑M2/1‑38 (MQ=255)                                                                                                                tC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCGGCTACTTCAAGCCTTTGCAGGTAGGGAGTGACAGGGCACAAGGCCTTGAGGGCAGGGGTGCGGTGCTTGACGCGCAATGCTTcg                                                            <  2:226415/120‑1 (MQ=255)                                                                                                                tC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCGGCGACTTCATCCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGAGGGCAGGGGTGCGGTGCTGGACGCCCAAGGCTTcg                                                            >  1:226415/1‑120 (MQ=255)                                                                                                                            ggA‑ACACCGGC‑‑CCATGGGCAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGAGGGCAGGGGTGCGGTGCTGGACGCCCAAGGCTTCGCGGTCGCCCTTGCTGCGCGGCAGGAAAAGCGTAATGcc                      >  2:124947/1‑148 (MQ=255)                                                                                                                            ggA‑ACACCGGC‑‑CCATGGGCAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGAGGGCAGGGGTGCGGTGCTGGACGCCCAAGGCTTCGCGGTCGCCCTTGCTGCGCGGCAGGAAAAGCGTAATGcc                      >  4:226725/1‑148 (MQ=255)                                                                                                                             gA‑ACACCGGC‑‑CCATGGGCAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGAGGGCAGGGGTGCGGTGCTGGACGCCCAAGGCTTCGCGGTCGCCCTTGCTGCGCGGCAGGaaa                                 >  1:317721/1‑136 (MQ=255)                                                                                                                             gA‑ACACCGGC‑‑CCATGGGCAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGAGGGCAGGGGTGCGGTGCTGGACGCCCAAGGCTTCGCGGTCGCCCTTGCTGCGCGGCAGGaaa                                 <  2:317721/136‑1 (MQ=255)                                                                                                                             gA‑ACACCGGC‑‑CCATGGGCAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGAGGGCAGGGGTGCGGTGCTGGACGCCCAAGGCTTCGCGGTCGCCCTTGCTGCGCGGCAGGAAAAGCGTAATGCCGa                    <  6:82517/149‑1 (MQ=255)                                                                                                                             gA‑ACACCGGC‑‑CCATGGGCAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGAGGGCAGGGGTGCGGTGCTGGACGCCCAAGGCTTCGCGGTCGCCCTTGCTGCGCGGCAGGAAAAGCGTAATGCCGa                    >  3:56084/1‑149 (MQ=255)                                                                                                                                  acCGGC‑‑ACATGGGCAATACCGGCGACTTCAAGCCATTGCAGGAAGGCAGTCACAGCGCACAACGACTTGACGGCAGGTTTGCCGTGCTTGACGCCCAAGGCTTCCCGGTCGCCCTTGCTAATAGGAAGGAAAACAGAAATGCCGACAcc                >  2:107458/1‑149 (MQ=255)                                                                                                                                     ggC‑‑CCATGGGCAATACCGGCGACTACAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGAGGGCAGGGGTGCGGAGCTGGACGCCCAAGGCTTAGCGGTCGCACTTCCTGCGCGGCAGGAAAAGCGTAATGCCGACACCGGc             >  5:181987/1‑149 (MQ=255)                                                                                                                                      gC‑‑CCATGGGCAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGAGGGCAGGGGTGCGGTGCTGGACGCCCAAGGCTTCGCGGTCGCCCTTGCTGCGCGGCAGGAAAAGCGTAATGCCGACACCGGCt            <  3:99375/149‑1 (MQ=255)                                                                                                                                          ccATGGGCAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGAGGGCAGGGGTGCGGTGCTGGACGCCCAAGGCTTCGCGGTCGCCCTTGCTGCGCGGCAGGAAAAGCGt                            <  4:266457/131‑1 (MQ=255)                                                                                                                                          ccATGGGCAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGAGGGCAGGGGTGCGGTGCTGGACGCCCAAGGCTTCGCGGTCGCCCTTGCTGCGCGGCAGGAAAAGCGt                            >  3:266457/1‑131 (MQ=255)                                                                                                                                           cATGGGCAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGAGGGCAGGGGTGCGGTGCTGGACGCCCAAGGCTTCGCGGTCGCCCTTGCTGCGCGGCAGGAAAAGCGTAATGCCGACACCGGCTTgc         <  5:71685/149‑1 (MQ=255)                                                                                                                                            aTGGGCAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGAGGGCAGGGGTGCGGTGCTGGACGCCCAAGGCTTCGCGGTCGCCCTTGCTGCGCGGCAGGAAAAGCGTAATGCCGACACCGGCTTgcg        >  8:138364/1‑149 (MQ=255)                                                                                                                                            aTGGGCAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGAGGGCAGGGGTGCGGTGCTGGACGCCCAAGGCTTCGCGGTCGCCCTTGCTGCGCGGCAGGAAAAGCGTAATGCCGACACCGGCTTgcg        >  7:184656/1‑149 (MQ=255)                                                                                                                                                gCAATACCggcgacaacgcgctcaacagcaacagcctggtgggcctgctgcggcgcatgctggaacgcgccggggtgccggcggcgctgtataccggccactcgctacggcgtggcttcgccacctgggccacggccaatggttgggaa    >  1:185054‑M2/1‑8 (MQ=255)                                                                                                                                                 cAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGAGGGCAGGGGTGCGGTGCTGGACGCCCAAGGCTTCGCGGTTGCCCTTGCTGCGCGGCAGGAAAAGCGTAATGCCGACACCGGCTTGCGCCTg    >  2:163332/1‑148 (MQ=255)                                                                                                                                                 cAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGAGGGCAGGGGTGCGGTGCTGGACGCCCAAGGCTTCGCGGTCGCCCTTGCTGCGCGGCAGGAAAAGCGTAATGCCGACACCGGCTTGCGCCTgg   <  4:273551/149‑1 (MQ=255)                                                                                                                                                 cAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGAGGGCAGGGGGGCGGTGCTGGACGCCCAAGGCTTCGCGGTCGCCCTTGCTGCGCGTCAGGAAAAGCGTAATGCCGACACCGGCTTGCGCCTgg   <  1:57579/149‑1 (MQ=255)                                                                                                                                                  aaTACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGAGGGCAGGGGTGCGGTGCTGGACGCCCAAGGCTTCGCGGTCGCCCTTGCTGCGCGGCAGGAAAAGCGTAATGCCGACACCGGCTTGCGCCTGGa  >  5:327236/1‑149 (MQ=255)                                                                                                                                                  aaTACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGAGGGCAGGGGTGCGGTGCTGGACGCCCAAGGCTTCGCGGTCGCCCTTGCTGCGCGGCAGGAAAAGCGTAATGCCGACACCGGCTTGCGCCTGGa  >  3:83523/1‑149 (MQ=255)                                                                                                                                                       cGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGAGGGCAGGGGTGCGGTGCTGGACGCCCAAGGCTTCGCGGTCGCCCTtg                                                >  4:117108/1‑98 (MQ=255)                                                                                                                                                       cGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGAGGGCAGGGGTGCGGTGCTGGACGCCCAAGGCTTCGCGGTCGCCCTtg                                                <  3:117108/98‑1 (MQ=255)                                                                                                                                                       |                                                                                                                                                GAGTGGCCGGTATACAGCGCCGCCGGCACCCCGGCGCGTTCCAGCATGCGCCGCAGCAGGCCCACCAGGCTGTTGCTGTTGAGCGCGTTGTCGCCAAGGTTGCCCCAGCGGTC‑‑GAGTTTGCGGA‑ACACCGGC‑‑CCATGGGCAATACCGGCGACTTCAAGCCATTGCAGGTAGGCAGTGACAGGGCACAAGGCCTTGAGGGCAGGGGTGCGGTGCTGGACGCCCAAGGCTTCGCGGTCGCCCTTGCTGCGCGGCAGGAAAAGCGTAATGCCGACACCGGCTTGCGCCTGGA  >  NC_002947/3605986‑3606274

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.