New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3846358 =	43 (0.850)	3 (0.060)	3/246	NT	6.3%	coding (339/966 nt)	PP_3395	LysR family transcriptional regulator
	?	NC_002947	3846424 =	48 (1.000)					coding (273/966 nt)	PP_3395	LysR family transcriptional regulator

AGTGGGTATTCCAGCATGAACGCTGACAGTTCTTCGGGCAGAAACTCCATGATCGACGATACATTGGCCAGCACCCGCACATGACCACGCGCGCCGTGGGCGTATTCGCTCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCACGCCGCGCTTGCTACGTTTGAGCAAGGCGGTGCCAAAGCGCGCCTCAATGTCTGAAATACGTTTACTGACGGCGGACGGCGCCATGAACGCGCGCTCGCCT  >  NC_002947/3846278‑3846571                                                                                                                                                   |                                                                                                                                                     gcaccgccttgctcaaacgtagcaagcgcggcgtggagcccaccccggcggggcttgcactgctgcgccatgccagggaaATGACCACGCGCGCCGTGGGCGTATTCGCTCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTc                                                                                                                                                    >  7:249238‑M1/81‑149 (MQ=255)  gTGGGTATTCCAGCATGAACGCTGACAGTTCTTCGGGCAGAAACTCCATGATCGACGATACATTGGCCAGCACCCGCACATGACCACGCGCGCCGTGGGCGTATTCGCTCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTcc                                                                                                                                                   >  3:151019/1‑149 (MQ=255)  gTGGGTATTCCAGCATGAACGCTGACAGTTCTTCGGGCAGAAACTCCATGATCGACGATACATTGGCCAGCACCCGCACATGACCACGCGCGCCGTGGGCGTATTCGCTCAGCTCACTGTCCAGGCGTTCCATGGCGCGGGTCATTTcc                                                                                                                                                   >  6:24825/1‑149 (MQ=255)         ttCCAGCATGAACGCTGACAGTTCTTCGGGCAGAAACTCCATGATCGACGATACATTGGCCAGCACCCGCACATGACCACGCGCGCCGTGGGCGTATTCGCTCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCAt                                                                                                                                           <  8:290226/149‑1 (MQ=255)          tCCAGCATGAACGCTGACAGTTCTTCGGGCAGAAACTCCATGATCGACGATACATTGGCCAGCACCCGCACATGACCACGCGCGCCGTGGGCGTATTCGCTCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATg                                                                                                                                          >  6:10112/1‑149 (MQ=255)           ccAGCATGAACGCTGACAGTTCTACGGGCAGAAACTCCATGATCGACGATACAATGGCCAGCACCCGCACATGACCACGCGCGCCGTGGGCGTATTTGCTCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTCGCATgg                                                                                                                                         >  6:55076/1‑149 (MQ=255)            ccgCATGAACGCTGACAGTTCTGCGGGCAGAAACTCCATGATCGACGAGACATTGGCCAGCACCCGCACATGACCACGCGCGCCGTGGGCGTATTCGCTCAGCTCGCTGGCCAGGCGTTCCATTGAGCGGGGCAGTTCC‑CTGGCATGgc                                                                                                                                        >  3:189935/3‑149 (MQ=255)                    aCGCTGACAGTTCTTCGGGCAGAAACTCCATGATCGACGATACATTGGCCAGCACCCGCACATGACCACGCGCGCCGTGGGCGTATTCGCTCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGt                                                                                                                                <  3:152740/149‑1 (MQ=255)                                      gCAGAAACTCCATGATCGACGATACATTGGCCAGCACCCGCACATGACCACGCGCGCCGTGGGCGTATTCGCTCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTg                                                                                                              >  4:214112/1‑149 (MQ=255)                                      gCAGAAACTCCATGATCGACGATACATTGGCCAGCACCCGCACATGACCACGCGCGCCGTGGGCGTATTCGCTCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTg                                                                                                              <  1:59181/149‑1 (MQ=255)                                      gCAGAAACTCCATGATCGACGATACATTGGCCAGCACCCGCACATGACCACGCGCGCCGTGGGCGTATTCGCTCAGCTCACTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTg                                                                                                              <  5:24825/149‑1 (MQ=255)                                        aGAAACTCCATGATCGACGATACATTGGCCTGCACCCGCACATGACCACGCGCGCCGTGGGCGTATTCGCTCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTcc‑c                                                                                                                                                 <  4:171033/112‑1 (MQ=255)                                        aGAAACTCCATGATCGACGATACATTGGCCTGCACCCGCACATGACCACGCGCGCCGTGGGCGTATTCGCTCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTcc‑c                                                                                                                                                 >  3:171033/1‑112 (MQ=255)                                          aaaCTCCATGATCGACGATACATTGGCCAGCACCCGCACATGACCACGCGCGCCGTGGGCGTATTCGCTCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCt                                                                                                          >  1:134330/1‑149 (MQ=255)                                            aCTCCATGATCGACGATACATTGGCCAGCACCCGCACATGACCACGCGCGCCGTGGGCGTATTCGCTCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGCCTcc                                                                                                        >  2:311256/1‑149 (MQ=255)                                             cTCCATGATCGACGATACATTGGCCAGCACCCGCACATGACCACGCGCGCCGTGGGCGTATTCGCTCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCa                                                                                                       >  6:75591/1‑149 (MQ=255)                                               ccATGATCGACGATACATTGGCCAGCACCCGCACATGACCACGCGCGCCGTGGGCGTATTCGCTCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCAcg                                                                                                     >  3:130532/1‑149 (MQ=255)                                                cATGATCGACGATACATTGGCCAGCACCCGCACATGACCACGCGCGCCGTGGGCGTATTCGCTCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCAc                                                                                                      <  5:10112/147‑1 (MQ=255)                                                  tGATCGACGATACATTGGCCAGCACCCGCACATGACCACGCGCGCCGTGGGCGTATTCGCTCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCAcgccg                                                                                                  <  4:20412/149‑1 (MQ=255)                                                      cgacgaTACATTGGCCAGCACCCGCACATGACCACGCGCGCCGTGGGCGTATTCGCTCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCACGCCGCGCt                                                                                              >  6:158059/1‑149 (MQ=255)                                                       gacgaTACATTGGCCAGCACCCGCACATGACCACGCGCGCCGTGGGCGTATTCGCTCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCgcag                                                                                                                                    <  7:24088/110‑1 (MQ=255)                                                       gacgaTACATTGGCCAGCACCCGCACATGACCACGCGCGCCGTGGGCGTATTCGCTCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCgcag                                                                                                                                    >  8:24088/1‑110 (MQ=255)                                                              cATTGGCCAGCACCCGCACATGCCCACGCGCGCCGTGGGGGTATTCGCGCCGCTCGCTGTCCAGGGGTTCCATGGCGGGGGTCATTTCCTCTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCACGCCGCGCTTGCTAc                                                                                        <  1:92631/148‑1 (MQ=255)                                                                ttGGCCAGCACCCGCACATGACCACGCGCGCCGTCGCCGTATTCGCTCAGCTCGCTGTCCAGGCCTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGAGCAAGCCCCGCCGGGCTGGGCTCCACGCCGCGCTTGCTACGttt                                                                                    >  8:130454/1‑149 (MQ=255)                                                                     cAGCACCCGCACATGACCACGCGCGCCGTGGGCGTATTCGCTCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCACGCCGCGCTTGCTACGTTTGAGc                                                                                >  2:21436/1‑148 (MQ=255)                                                                      aGCACCCGCACATGACCACGCGCGCCGTGGGCGTATTCGCTCAGCTCGCTTTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCACGCCGCGCTTGCTACGTTTGAGCaa                                                                              <  3:190251/149‑1 (MQ=255)                                                                        cACCCGCACATGACCACGCGCGCCGTGGGCGTATTCGCTCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCACGCCGCGCTTGCTACGTTTGAGCAAgg                                                                            >  7:17904/1‑149 (MQ=255)                                                                           ccGCACATGACCACGCGCGCCGTGGGCGTATTCGCTCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCACGCCGCGCTTGCTACGTTTGAGCAAGGCgg                                                                         >  5:272659/1‑149 (MQ=255)                                                                           ccGCACATGACCACGCGCGCCGTGGGCGTATTCGCTCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCACGCCGCGCTTGCTACGTTTGAGCAAGGCgg                                                                         >  7:294188/1‑149 (MQ=255)                                                                           ccGCACATGACCACGCGCGCCGTGGGCGTATTCGCTCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCACGCCGCGCTTGCTACGTTTGAGCAAGGCgg                                                                         >  8:148797/1‑149 (MQ=255)                                                                             gctcaTGACCACGCGCGCCGTGGGCGTATTCGCTCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGGTCCACGCCGCGCTTGCTACGTTTGAGCAAGGCGGTg                                                                       <  7:130454/146‑1 (MQ=255)                                                                              gaaatgacccgcgccatggaacgcctggacagcgagctgagcgaatacgcccacggcgcgcgtggtcatTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCACGCCGCGCTTGCTACGTTTGAGCAAGGCGGTGc                                                                      >  7:249238‑M2/70‑149 (MQ=255)                                                                                 ATGACCACGCGCGCCGTGGGCGTATTCGCTCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCACGCCGCGCTTGCTACGTTTGAGCAAGGCGGTGCCa                                                                    <  5:125751‑M1/148‑1 (MQ=255)                                                                                    acccgcgccatggaacgcctggacagcgagctgagcgaatacgcccacggcgcgcgtggtcatTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCACGCCGCGCTTGCTACGTTTGAGCAAGGCGGTGCCAAAgc                                                                >  2:30946‑M2/64‑149 (MQ=255)                                                                                     CCACGCGCGCCGTGGGCGTATTCGCTCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCTTGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCACGCCGCGCTTGCTACGTTTGAGCAAGGCGGTGCCAAAgcg                                                               <  4:116264‑M1/149‑1 (MQ=255)                                                                                        cgcgcgCCGTGGGCGTATTCGCTCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCACGCCGCGCTTGCTACGTTTGAGCAAGGCGGTGCCAAAgcgcgc                                                            <  6:272659/149‑1 (MQ=255)                                                                                             gcCGTGGGCGTATTCGCTCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCACGCCGCGCTTGCTACGTTTGAGCAAGGCGGTGCCAAAGCGCGCCTCaa                                                       >  5:223559/1‑149 (MQ=255)                                                                                              ccGTGGGCGTATTCGCTCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCACGCCGCGCTTGCTACGTTTGAGCAAGGCGGTGCCAAAGCGCGCCTCAAt                                                      <  1:21436/149‑1 (MQ=255)                                                                                                   ggCGTATTTGCTCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCACGCCGCGCTTGCTACGTTTGAGCAAGGCGGTGCCAAAGCGCGCCTCAATGTCTg                                                 <  5:55076/149‑1 (MQ=255)                                                                                                   ggCGTATTCGCTCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCACGCCGCGCTTGCTACGTTTGAGCAAGGCGGTGCCAAAGCGCGCCTCAATGTCt                                                  <  1:311256/148‑1 (MQ=255)                                                                                                   ggCGTATTCGCTCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCACGCCGCGCTTGCTACGTTTGAGCAAGGCGGTGCCAAAGCGCGCCTCAATGTCt                                                  >  3:265359/1‑148 (MQ=255)                                                                                                    gCGTATTCGCTCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCACGCCGCGCTTGCTACGTTTGAGCAAGGCGGTGCCAAAGCGCGCCTCAATGTCTGa                                                <  6:223559/149‑1 (MQ=255)                                                                                                     cctggacagcgagctgagcgaatacgcccacggcgcgcgtggtcatTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCACGCCGCGCTTGCTACGTTTGAGCAAGGCGGTGCCAAAGCGCGCCTCAATGTCTGaa                                               <  8:249238‑M2/103‑1 (MQ=255)                                                                                                         ttCGCTCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCACGCCGCGCTTGCTACGTTTGAGCAAGGCGGTGCCAAAGCGCGCCTCAATGTCTGAAATAc                                           <  4:151019/149‑1 (MQ=255)                                                                                                            gCTCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCACGCCGCGCTTGCTACGTTTGAGCAAGGCGGTGCCAAAGCGCGCCTCAATGTCTGAAATACGtt                                        >  2:122249/1‑149 (MQ=255)                                                                                                            gCTCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCACGCCGCGCTTGCTACGTTTGAGCAAGGCGGTGCCAAAGCACGCCTCAATGTCTGAAATACGtt                                        >  2:13219/1‑149 (MQ=255)                                                                                                             cTCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCACGCCGCGCTTGCTACGTTTGAGCAAGGCGGTGCCAAAGCGCGCCTCAATGTc                                                   >  6:127489/1‑137 (MQ=255)                                                                                                             cTCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCACGCCGCGCTTGCTACGTTTGAGCAAGGCGGTGCCAAAGCGCGCCTCAATGTc                                                   <  5:127489/137‑1 (MQ=255)                                                                                                              tCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCACGCCGCGCTTGCTACGTTTGAGCAAGGCGGTGCCAAAGCGCGCCTCAATGTCTGAAATACGttt                                       >  2:311217/1‑148 (MQ=255)                                                                                                                  cTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCACGCCGCGCTTGCTACGTTTGAGCAAGGCGGTGCCAAAGCGCGCCTCAATGTCTGaaa                                              >  4:270811/1‑137 (MQ=255)                                                                                                                  cTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCACGCCGCGCTTGCTACGTTTGAGCAAGGCGGTGCCAAAGCGCGCCTCAATGTCTGaaa                                              <  3:270811/137‑1 (MQ=255)                                                                                                                     gCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCACGCCGCGCTTGCTACGTTTGAGCAAGGCGGTGCCAAAGCGCGCCTCAATGTCTGAAATACGTTTACTgacgg                               <  4:130532/149‑1 (MQ=255)                                                                                                                     gCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCACGCCGCGCTTGCTACGTTTGAGCAAGGCGGTGCCAAAGCGCGCCTCAATGTCTGAAATACGTTTACTgacgg                               <  3:214112/149‑1 (MQ=255)                                                                                                                           cAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCACGCCGCGCTTGCTACGTTTGAGCAAGGCGGTGCCAAAGCGCGCCTCAATGTCTGAAATACGTTTACTgacggcggacg                         >  5:263614/1‑149 (MQ=255)                                                                                                                           cAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCCGGGTGGGCTCCACGCCGCGCTTGCTACGTTTGAGCAAGGCGGTGCCAAAGCGCGCATCAATGTCTGAAATACGTTTACTgacggcggacg                         >  2:311120/1‑149 (MQ=255)                                                                                                                                 ttCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCACGCCGCGCTTGCTACGTTTGAGCAAGGCGGTGCCAAAGCGCGCCTCAATGTCTGAAATACGTTTACTGACGGCGGACGGCGCCa                   <  5:75591/149‑1 (MQ=255)                                                                                                                                    cATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCACGCCGCGCTTGCTACGTTTGAGCAAGGCGGTGCCAAAGCGCGCCTCAATGTCTGAAATACGTTTACTGACGGCGGACGGCGCCATg                 >  2:154761/1‑148 (MQ=255)                                                                                                                                      tGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCACGCCGCGCTTGCTACGTTTGAGCAAGGCGGTGCCAAAGCGCGCCTCAATGTCTGAAATACGTTTACTGACGGCGGACGGCGCCATGAAc              <  6:125751/149‑1 (MQ=255)                                                                                                                                        gcgcGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCACGCCGCGCTTGCTACGTTTGAGCAAGGCGGTGCCAAAGCGCGCCTCAATGTCTGAAATACGTTTACTGACGGCGGACGGCGCCATGAAcgc            >  3:192299/1‑149 (MQ=255)                                                                                                                                                 atTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCACGCCGCGCTTGCTACGTTTGAGCAAGGCGGTGCCAAAGCGCGCCTCAATGTCTGAAATACGTTTACTGACGGCGGACGGCGCCATGAACGCGCGCTCGcc   >  6:33373‑M2/3‑149 (MQ=255)                                                                                                                                                 atTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCACGCCGCGCTTGCTACGTTTGAGCAAGGCGGTGCCAAAGCGCGCCTCAATGTCTGAAATACGTTTACTGACGGCGGACGGCGCCATGAACGCGCGCTCGcc   >  6:259367‑M2/3‑149 (MQ=255)                                                                                                                                                  tTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCACGCCGCGCTTGCTACGTTTGAGCAAGGCGGTGCCAAAGCGCGCCTCAATGTCTGAAATACGTTTACTGACGGCGGACGGCGCCATGAACGCGCGCTCGCCt  >  3:91748‑M2/2‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                     AGTGGGTATTCCAGCATGAACGCTGACAGTTCTTCGGGCAGAAACTCCATGATCGACGATACATTGGCCAGCACCCGCACATGACCACGCGCGCCGTGGGCGTATTCGCTCAGCTCGCTGTCCAGGCGTTCCATGGCGCGGGTCATTTCC‑CTGGCATGGCGCAGCAGTGCAAGCCCCGCCGGGGTGGGCTCCACGCCGCGCTTGCTACGTTTGAGCAAGGCGGTGCCAAAGCGCGCCTCAATGTCTGAAATACGTTTACTGACGGCGGACGGCGCCATGAACGCGCGCTCGCCT  >  NC_002947/3846278‑3846571

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.