New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5334516 =	52 (1.030)	4 (0.080)	4/242	NT	7.2%	coding (946/2976 nt)	PP_4695	two‑component system sensor histidine kinase
	?	NC_002947	5334561 =	54 (1.140)					coding (991/2976 nt)	PP_4695	two‑component system sensor histidine kinase

TTCCTGCTGCTGATGAGCCTTGCCGTGCCGCTGGTGCTGTGGGCCGGCCTGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAGGGCAACATCTACCGTTGGCTGAAGTGGACCCGCCGTGCACTGATCGTC  >  NC_002947/5334414‑5334707                                                                                                                                                     |                                                                                                                                                   ttCCTGCTGCTGATGAGCCTTGCCGTGCCGCTGGTGCTGTGGGCCGGCCTGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCt                                                                                                                                                   <  2:17064/149‑1 (MQ=255)       ctgctgATGAGCCTTGCCGTGCCGCTGGTGCTGTGGGCCGGCCTGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCgg                                                                                                                                              >  2:18097/1‑148 (MQ=255)        tgctgATGAGCCTTGCCGTGCCGCTGGTGCTGTGGGCCGGCCGGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGca                                                                                                                                            <  5:272688/149‑1 (MQ=255)             atgaGCCTTGCCGTGCCGCTGGTGCTGTGGGCCGGCCTGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGcagccag                                                                                                                                       >  4:312201/1‑149 (MQ=255)                 gCCTTGCCGTGCCGCTGGTGCTGTGGGCCGGCCTGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGc                                                                                                                                   >  7:163729/1‑149 (MQ=255)                   cTTGCCGTGCCGCTGGTGCTGTGGGCCGGCCTGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCt                                                                                                                                 <  5:36531/149‑1 (MQ=255)                         gtgccgCTGGTGCTGTGGGCCGGCCTGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGatcat                                                                                                                           >  6:266392/1‑149 (MQ=255)                           gccgCTGGTGCTGTGGGCCGGCCTGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCg                                                                                                                         >  7:161680/1‑149 (MQ=255)                                   tGCTGTGGGCCGGCCTGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCaccacc                                                                                                                 <  1:128707/149‑1 (MQ=255)                                    gCTGTGGGCCGGCCTGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCAccc                                                                                                                >  3:303004/1‑149 (MQ=255)                                       gtgGGCCGGCCTGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTgg                                                                                                             >  4:242521/1‑149 (MQ=255)                                             cggccTGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGAATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGt                                                                                                       >  8:272558/1‑149 (MQ=255)                                                  tGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCggg                                                                                                   >  4:140131/1‑148 (MQ=255)                                                          ggCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGccc                                                                                           <  3:242521/148‑1 (MQ=255)                                                            cgcCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGa                                                                                        <  3:312201/149‑1 (MQ=255)                                                            cgcCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGa                                                                                        <  7:157255/149‑1 (MQ=255)                                                              ccAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑TTTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAac                                                                                      <  1:100989/149‑1 (MQ=255)                                                              ccAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAac                                                                                      >  2:100989/1‑149 (MQ=255)                                                               cAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAACCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAacc                                                                                     >  4:136359/1‑149 (MQ=255)                                                                   aCCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGTATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCt                                                                                 <  7:272558/149‑1 (MQ=255)                                                                    ccAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTg                                                                                >  6:139633/1‑149 (MQ=255)                                                                     cAACCCCGAGTACTTCACCCTGGGCCTGGGGATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTgg                                                                               >  1:27985/1‑149 (MQ=255)                                                                     cAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTc                                                                                                      >  6:26250/1‑126 (MQ=255)                                                                     cAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTc                                                                                                      <  5:26250/126‑1 (MQ=255)                                                                     cAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTgg                                                                               >  4:44569/1‑149 (MQ=255)                                                                     cAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTgg                                                                               >  5:252177/1‑149 (MQ=255)                                                                        ccccGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGatc                                                                                                                             <  5:155817/100‑1 (MQ=255)                                                                        ccccGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGatc                                                                                                                             >  6:155817/1‑100 (MQ=255)                                                                           cGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGtgctgc                                                                         <  8:161680/149‑1 (MQ=255)                                                                            gAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGcc                                                                        >  2:38559/1‑149 (MQ=255)                                                                                    cACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTAc                                                                 <  7:125570/148‑1 (MQ=255)                                                                                     aCCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTAcc                                                                <  1:38559/148‑1 (MQ=255)                                                                                      cccTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCTCTGAACCACCTGGTGCTGCCGCTTTACCAg                                                              <  8:163729/149‑1 (MQ=255)                                                                                        ctgggcctgggcATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACAATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGACCCACCTGGTGCTGCCGCTTTACCAgc                                                             >  1:80442/1‑149 (MQ=255)                                                                                          gggcctgggcATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAgccgc                                                          >  6:263393/1‑149 (MQ=255)                                                                                              ctgggcATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCgccggc                                                      >  6:141031/1‑149 (MQ=255)                                                                                                gggcATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCgccggcc                                                     >  6:12420/1‑148 (MQ=255)                                                                                                gggcATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCgccggcc                                                     >  2:157169/1‑148 (MQ=255)                                                                                                     tCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAgg                                                 >  5:104312/1‑147 (MQ=255)                                                                                                     tCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAgg                                                 <  6:104312/147‑1 (MQ=255)                                                                                                       GCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAaccac                                                                                   >  4:185043‑M1/1‑111 (MQ=255)                                                                                                       GCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAaccac                                                                                   <  3:185043‑M1/111‑1 (MQ=255)                                                                                                       GCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAGGGCaa                                             <  2:172669‑M1/149‑1 (MQ=255)                                                                                                        CCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAGGGCAAc                                            >  5:139633‑M1/1‑149 (MQ=255)                                                                                                         ccgccaatgtaggccagcagtgccaatgcctggttgttggcggcCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAGGGCaa                                             >  1:300284‑M2/45‑148 (MQ=255)                                                                                                          GCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAGGGCAACa                                           <  4:31965‑M1/148‑1 (MQ=255)                                                                                                          GCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAGGGCAACa                                           >  3:31965‑M1/1‑148 (MQ=255)                                                                                                           gccaatgtaggccagcagtgccaatgcctggttgttggcggcCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAGGGCAACAt                                          <  2:300284‑M2/107‑1 (MQ=255)                                                                                                           CCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAGGGCAACa                                           <  8:27561‑M1/147‑1 (MQ=255)                                                                                                           CCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAGGGCAACa                                           >  7:27561‑M1/1‑147 (MQ=255)                                                                                                              ACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAGGGCAACATCTAc                                      <  3:184085‑M1/149‑1 (MQ=255)                                                                                                                tgtaggccagcagtgccaatgcctggttgttggcggcCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGt                                                                              >  5:47924‑M2/38‑108 (MQ=255)                                                                                                                tgtaggccagcagtgccaatgcctggttgttggcggcCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGt                                                                              <  6:47924‑M2/71‑1 (MQ=255)                                                                                                                   cAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACTACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAgccg                                                           <  6:321614/123‑1 (MQ=255)                                                                                                                   cAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAGGGCAACATCTACCGTTg                                 >  3:231279/1‑149 (MQ=255)                                                                                                                   cAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACAACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAgccg                                                           >  5:321614/1‑123 (MQ=255)                                                                                                                    aGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCgccggcc                                                     >  6:154881/1‑128 (MQ=255)                                                                                                                    aGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCgccggcc                                                     <  5:154881/128‑1 (MQ=255)                                                                                                                    aGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAGGGCAACATCTACCGTTgg                                <  2:27985/149‑1 (MQ=255)                                                                                                                    aGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAACCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAGGGCAACATCTACCGTTgg                                <  3:136359/149‑1 (MQ=255)                                                                                                                        aTTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAGGGCAACATCTACCGTTGGCTg                             >  8:46784/1‑148 (MQ=255)                                                                                                                            gCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAGGGCAACATCTACCGTTGGCTGAAGTg                        <  3:100323/149‑1 (MQ=255)                                                                                                                            gCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAGGGCAACATCTACCGTTGGCTGAAGTg                        <  5:263393/149‑1 (MQ=255)                                                                                                                            gCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAGGGCAACATCTACCGTTGGCTGAAGTg                        <  1:18097/149‑1 (MQ=255)                                                                                                                             cACTGATGGCCTAA‑ATTGGCGGCATGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGATTTACCAGCCGCCGTCCGAGGGCAACATCTACAGTTGGCTGAAGTg                        >  6:62024/1‑148 (MQ=255)                                                                                                                                tgctgGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAGGGCAACATCTACCGTTGGCTGAAGTGGAcc                    >  3:72468/1‑149 (MQ=255)                                                                                                                                     gCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAGGGCAACTTCTACCGTTGGCTGAAGTGGACccgccg               <  6:307919/149‑1 (MQ=255)                                                                                                                                      ccTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAGGGCAACATCTACCGTTGGCTGAAGTGGACCCGCCGt              >  3:122261/1‑149 (MQ=255)                                                                                                                                        tAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAGGGCAACATCTACCGTTGGCTGAAGTGGACCCGCCGTg             >  3:120656/1‑148 (MQ=255)                                                                                                                                               ggcggcCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAGGGCAACATCTACCGTTGGCTGAAGTGGACCCGCCGTGCACTGa       <  5:141031‑M2/142‑1 (MQ=255)                                                                                                                                                  ggcCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAGGGCAACATCTACCGTTGGCTGAAGTGGACCCGCCGTGCACTGAtcgt   <  5:266392‑M2/146‑1 (MQ=255)                                                                                                                                                   gcCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAGGGCAACATCTACCGTTGGCTGAAGTGGACCCGCCGTGCACTGAtcgtc  <  4:72468‑M2/147‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                   TTCCTGCTGCTGATGAGCCTTGCCGTGCCGCTGGTGCTGTGGGCCGGCCTGCGCCTGGGCGCCAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTAC‑ATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGGTGCTGCCGCTTTACCAGCCGCCGGCCGAGGGCAACATCTACCGTTGGCTGAAGTGGACCCGCCGTGCACTGATCGTC  >  NC_002947/5334414‑5334707

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.