| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5305168 | 30 (1.040) | 4 (0.150) | 4/272 | 3.4 | 12.7% | coding (2084/3483 nt) | recC | multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit |
| ? | NC_002947 | = 5305201 | 27 (0.990) | coding (2051/3483 nt) | recC | multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAGGTAACGGTCGTCTTCGCGGCGTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5305015‑5305168‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcatgcccaTGCGCGCGATCCCCTTCAGAGTGGTCTGCCTGCTGGGCATGAACGATGGCGATTACCCGCGTGCGCAGCCACCGCTGGACTTCGACCTGATGGCCAGCGACTATCGCCCCGGCGACCGCTCACGCCGCGAAGACGACCG < NC_002947/5305201‑5305063 ACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAGGTAACGGTCGTCTTCGCGGCGTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTACAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCA > 5:23655/1‑148 CAGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAGGTAACGGTCGTCTTCGCGGCGTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGC > 4:89324/1‑146 AGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAGGTAACGGTCGTCTTCGCGGCGTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCA > 1:63500/1‑148 AGGTAACGGTCGTCTTCGCGGCGTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCATGCGCGCGATCCCCTTCAGAGTGGTCTGCCTGCTGG < 2:49016/148‑1 cACGGTCGTCTTCGCGGCGTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCATGCGCGCGATCCCCTTCAGAGTGGTCTGCCTGCTTGGCAT < 3:153251/147‑1 ACGGTCGTCTTCGCGGCGTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCATGCGCGCGATCCCCTTCAGAGTGGTCTGCCTGCTGGG > 7:94224/1‑144 CGGTCGTCTTCGCGGCGTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCATGCGCGCGATCCCCTTCAGAGTGGTCTGCCTGCTGGGC < 8:94224/144‑1 TCATGCCCATGCGCGCGATCCCCTTCAGAGTGGTCTGCCTGCTGGGCATGAACGATGGCGATTACCCGCGTGCGCAGCCACCGCTGGACTTCGACCTGATGGCCAGCGACTATCGCCCCGGCGACCGCTCACGCCGCGAAGACGCCCG > 6:123911/1‑148 ACATACAGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAGGTAACGGTCGTCTTCGCGGCGTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5305015‑5305168‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcatgcccaTGCGCGCGATCCCCTTCAGAGTGGTCTGCCTGCTGGGCATGAACGATGGCGATTACCCGCGTGCGCAGCCACCGCTGGACTTCGACCTGATGGCCAGCGACTATCGCCCCGGCGACCGCTCACGCCGCGAAGACGACCG < NC_002947/5305201‑5305063 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |