New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5305168	30 (1.040)	4 (0.150)	4/272	3.4	12.7%	coding (2084/3483 nt)	recC	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit
	?	NC_002947	= 5305201	27 (0.990)					coding (2051/3483 nt)	recC	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AACAGGTAACGGTCGTCTTCGCGGCGTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGAAGTTGACCGAGCCGGCGAGGAAACGTTGTGACAGCTTGCCCTGATCGAGGCCCGACAGCCAGGCTTCACGCACCACGGTAAGCGGTAGCGGGTCGTGCAGGCCGACGGTCTCGCACACCTCAAGCCA  >  NC_002947/5305054‑5305346                                                                                                                                                    |                                                                                                                                                  aaCAGGTAACGGTCGTCTTCGCGGCGTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCa                                                                                                                                                   >  7:86112/1‑148 (MQ=255)          cGGGCGTCTTCGCGGCGTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGa                                                                                                                                          <  6:123911/148‑1 (MQ=255)               gtcTTCGCGGCGTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAgtgt                                                                                                                                      >  2:22537/1‑147 (MQ=255)                     gcggcgTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGaa                                                                                                                                <  8:92274/147‑1 (MQ=255)                     gcggcgTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGaa                                                                                                                                <  7:123402/147‑1 (MQ=255)                     gcggcgTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGAAg                                                                                                                               >  4:4119/1‑148 (MQ=255)                       ggcgTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGAAGtt                                                                                                                             <  3:117972/148‑1 (MQ=255)                         cgTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGTGGATCGCTCGCATGGGCATGAGTGTGCAGAAGTTGa                                                                                                                           <  7:139750/148‑1 (MQ=255)                         cgTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGAAGTTGa                                                                                                                           <  5:82307/148‑1 (MQ=255)                                     ccGGGGCGATAGTCGCTGGCCATCAGGGCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGAAGTTGACCGAGCCGGCGa                                                                                                               <  3:49487/148‑1 (MQ=255)                                      cGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGAAGTTGACCGAGCCGGCGAg                                                                                                              <  6:158975/148‑1 (MQ=255)                                        gggCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGAAGTTGACCGAGCCGGCGAgg                                                                                                             >  5:90669/1‑147 (MQ=255)                                              tAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGAAGTTGACCGAGCCGGCGAGGAAACGtt                                                                                                      <  3:145614/148‑1 (MQ=255)                                                 tCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGAAGTTGACCGAGCCGGCGAGGAAACGTtgt                                                                                                    <  8:86112/147‑1 (MQ=255)                                                         cATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGAAGTTGACCGAGCCGGCGAGGAAACGTTGTGACAGCTTg                                                                                           >  2:55310/1‑148 (MQ=255)                                                           tCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGAAGTTGACCGAGCCGGCGAGGAAACGTTGTGACAGCTTGcc                                                                                         <  2:24236/148‑1 (MQ=255)                                                                  gAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGAAGTTGACCGAGCCGGCGAGGAAACGTTGTGACAGCTTGCCCTGAt                                                                                    >  5:125536/1‑146 (MQ=255)                                                                       ccAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGAAGTTGACCGAGCCGGCGAGGAAACGTTGTGACAGCTTGCCCTGATCGAGGcc                                                                             <  6:125536/148‑1 (MQ=255)                                                                       ccAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGAAGTTGACCGAGCCGGCGAGGAAACGTTGTGACAGCTTGCCCTGATCGAGGcc                                                                             <  2:105618/148‑1 (MQ=255)                                                                                                  cGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGAAGTTGACCGAGCCGGCGAGGAAACGTTGTGACAGCTTGCCCTGATCGAGGCCCGACAGCCAGGCTTCACGCACCACGGt                                                  <  8:35126/148‑1 (MQ=255)                                                                                                         gTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGAAGTTGACCGAGCCGGCGAGGAAACGTTGTGACAGCTTGCCCTGATCGAGGCCCGACAGCCAGGCTTCACGCACCACGGTAAg                                               >  1:80186/1‑144 (MQ=255)                                                                                                          ttCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGAAGTTGACCGAGCCGGCGAGGAAACGTTGTGACAGCTTGCCCTGATCGAGGCCCGACAGCCAGGCTTCACGCACCACGGTAAGc                                              <  2:80186/144‑1 (MQ=255)                                                                                                                         cagACCACTCTGAAGGGGATCGCGGGCATTGGAATTAGTTTGCAGAAGTTGACAGTGCCTGCGAGGATAGGTTTTGAGAGCTTGACCTGATGTAGGCCAGACAGGCAGGCTTCACGATCAACTGTATGCGGTAGCTGGTCTTGCatg                            <  6:23655/147‑3 (MQ=255)                                                                                                                           gACCACTCTGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGAAGTTGACCGAGCCGGCGAGGAAACGTTGTGACAGCTTGCCCTGATCGAGGCCCGACAGCCAGGCTTCACGCACCACGGTAAGCGGTAGCGGGTCGTGCAGGCCg                         >  5:76569/1‑148 (MQ=255)                                                                                                                                 tctGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGAAGTTGACCGAGCCGGCGAGGAAACGTTGTGACAGCTTGCCCTGATCGAGGCCCGACAGCCAGGCTTCACGCACCACGGTAAGCGGTAGCGGGTCGTGCAGGCCGACGGtc                   <  8:100854/148‑1 (MQ=255)                                                                                                                                   tGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGAAGTTGACCGAGCCGGCGAGGAAACGTTGTGACAGCTTGCCCTGATCGAGGCCCGACAGCCAGGCTTCACGCACCACGGTAAGCGGTAGCGGGTCGTGCAGGCCGACGGtctc                 >  5:30521/1‑148 (MQ=255)                                                                                                                                      aGGGGATCGCGCGCATGGGCATGAGTGTGCAGAAGTTGACCGAGCCGGCGAGGAAACGTTGTGACAGCTTGCCCTGATCGAGGCCCGACAGCCAGGCTTCACGCACCACGGTAAGCGGTAGCGGGTCGTGCAGGCCGACGGtctc                 <  8:86302/145‑1 (MQ=255)                                                                                                                                               cgcgcATGGGCATGAGTGTGCAGAAGTTGACCGAGCCGGCGAGGAAACGTTGTGACAGCTTGCCCTGATCGAGGCCCGACAGCCAGGCTTCACGCACCACGGTAAGCGGTAGCGGGTCGTGCAGGCCGACGGTCTCGCACACCTCaa      <  6:141580/147‑1 (MQ=255)                                                                                                                                                  gcATGGGCATGAGTGTGCAGAAGTTGACCGAACCGGCGAGGAAACGTTGTGACAGCTTGCCCTGATCGAGGCCCGACAGCCAGGCTTCACGCACCACGGTAAGCGGTAGCGGGTCGTGCAGGCCGACGGTCTCGCACACCTCAAGCCa  >  1:25444/1‑148 (MQ=255)                                                                                                                                                    |                                                                                                                                                  AACAGGTAACGGTCGTCTTCGCGGCGTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGAAGTTGACCGAGCCGGCGAGGAAACGTTGTGACAGCTTGCCCTGATCGAGGCCCGACAGCCAGGCTTCACGCACCACGGTAAGCGGTAGCGGGTCGTGCAGGCCGACGGTCTCGCACACCTCAAGCCA  >  NC_002947/5305054‑5305346

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.