New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5305168	30 (1.040)	4 (0.150)	4/272	3.4	12.7%	coding (2084/3483 nt)	recC	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit
	?	NC_002947	= 5305201	27 (0.990)					coding (2051/3483 nt)	recC	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAGGTAACGGTCGTCTTCGCGGCGTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGAAGTTGACCGAGCCGGCGAGGAAACGTTGTGACAGCTTGCCCTGATCGAGGCCCGACAGCCAGGCTTCACGCACCACGGTAAGC  >  NC_002947/5305021‑5305302                                                                                                                                                    |                                                                                                                                       aGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAGGTAACGGTCGTCTTCGCGGCGTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCca                                                                                                                                        >  1:63500/1‑148 (MQ=255)           gTGCTGACAGTAGCGCTTCAAGTAACAGGTAACGGTCGTCTTCGCGGCGTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGAc                                                                                                                              >  5:58606/1‑148 (MQ=255)                      aGCGCTTCAAGTAACAGGTAACGGTCGTCTTCGCGGCGTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAgg                                                                                                                   <  8:32704/148‑1 (MQ=255)                           ttCAAGTAACAGGTAACGGTCGTCTTCGCGGCGTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATc                                                                                                              >  7:86302/1‑148 (MQ=255)                             cAAGTAACAGGTAACGGTCGTCTTCGCGGCGTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATcgc                                                                                                            >  7:92274/1‑148 (MQ=255)                              aaGTAACAGGTAACGGTCGTCTTCGCGGCGTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATcgcg                                                                                                           >  5:158975/1‑148 (MQ=255)                              aaGTAACAGGTAACGGTCGTCTTCGCGGCGTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATcgc                                                                                                            <  4:68768/147‑1 (MQ=255)                               aGTAACAGGTAACGGTCGTCTTCGCGGCGTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATcgcgc                                                                                                          <  8:9117/148‑1 (MQ=255)                               aGTAACAGGTAACGGTCGTCTTCGCGGCGTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATcgcgc                                                                                                          <  8:11380/148‑1 (MQ=255)                                  aaCAGGTAACGGTCGTCTTCGCGGCGTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCa                                                                                                       >  7:86112/1‑148 (MQ=255)                                           cGGGCGTCTTCGCGGCGTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGa                                                                                              <  6:123911/148‑1 (MQ=255)                                                gtcTTCGCGGCGTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAgtgt                                                                                          >  2:22537/1‑147 (MQ=255)                                                      gcggcgTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGaa                                                                                    <  8:92274/147‑1 (MQ=255)                                                      gcggcgTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGaa                                                                                    <  7:123402/147‑1 (MQ=255)                                                      gcggcgTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGAAg                                                                                   >  4:4119/1‑148 (MQ=255)                                                        ggcgTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGAAGtt                                                                                 <  3:117972/148‑1 (MQ=255)                                                          cgTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGTGGATCGCTCGCATGGGCATGAGTGTGCAGAAGTTGa                                                                               <  7:139750/148‑1 (MQ=255)                                                          cgTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGAAGTTGa                                                                               <  5:82307/148‑1 (MQ=255)                                                                      ccGGGGCGATAGTCGCTGGCCATCAGGGCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGAAGTTGACCGAGCCGGCGa                                                                   <  3:49487/148‑1 (MQ=255)                                                                       cGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGAAGTTGACCGAGCCGGCGAg                                                                  <  6:158975/148‑1 (MQ=255)                                                                         gggCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGAAGTTGACCGAGCCGGCGAgg                                                                 >  5:90669/1‑147 (MQ=255)                                                                               tAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGAAGTTGACCGAGCCGGCGAGGAAACGtt                                                          <  3:145614/148‑1 (MQ=255)                                                                                  tCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGAAGTTGACCGAGCCGGCGAGGAAACGTtgt                                                        <  8:86112/147‑1 (MQ=255)                                                                                          cATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGAAGTTGACCGAGCCGGCGAGGAAACGTTGTGACAGCTTg                                               >  2:55310/1‑148 (MQ=255)                                                                                            tCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGAAGTTGACCGAGCCGGCGAGGAAACGTTGTGACAGCTTGcc                                             <  2:24236/148‑1 (MQ=255)                                                                                                   gAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGAAGTTGACCGAGCCGGCGAGGAAACGTTGTGACAGCTTGCCCTGAt                                        >  5:125536/1‑146 (MQ=255)                                                                                                        ccAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGAAGTTGACCGAGCCGGCGAGGAAACGTTGTGACAGCTTGCCCTGATCGAGGcc                                 <  6:125536/148‑1 (MQ=255)                                                                                                        ccAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGAAGTTGACCGAGCCGGCGAGGAAACGTTGTGACAGCTTGCCCTGATCGAGGcc                                 <  2:105618/148‑1 (MQ=255)                                                                                                                                   cGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGAAGTTGACCGAGCCGGCGAGGAAACGTTGTGACAGCTTGCCCTGATCGAGGCCCGACAGCCAGGCTTCACGCACCACGGt      <  8:35126/148‑1 (MQ=255)                                                                                                                                          gTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGAAGTTGACCGAGCCGGCGAGGAAACGTTGTGACAGCTTGCCCTGATCGAGGCCCGACAGCCAGGCTTCACGCACCACGGTAAg   >  1:80186/1‑144 (MQ=255)                                                                                                                                           ttCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGAAGTTGACCGAGCCGGCGAGGAAACGTTGTGACAGCTTGCCCTGATCGAGGCCCGACAGCCAGGCTTCACGCACCACGGTAAGc  <  2:80186/144‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                       AGTTGGTCACGTGCTGACAGTAGCGCTTCAAGTAACAGGTAACGGTCGTCTTCGCGGCGTGAGCGGTCGCCGGGGCGATAGTCGCTGGCCATCAGGTCGAAGTCCAGCGGTGGCTGCGCACGCGGGTAATCGCCATCGTTCATGCCCAGCAGGCAGACCACTCTGAAGGGGATCGCGCGCATGGGCATGAGTGTGCAGAAGTTGACCGAGCCGGCGAGGAAACGTTGTGACAGCTTGCCCTGATCGAGGCCCGACAGCCAGGCTTCACGCACCACGGTAAGC  >  NC_002947/5305021‑5305302

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.