New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5206022 =	28 (0.970)	4 (0.150)	4/276	3.4	13.2%	coding (411/1209 nt)	PP_4586	hypothetical protein
	?	NC_002947	5206064 =	26 (0.940)					coding (369/1209 nt)	PP_4586	hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TCGAACAGGCGCGACACGTTGTCGATGCGAAACTTCCCCTTGCCGATGCGCGGCCAGGAGGTTTCGATGCTCTTCCAGCCCTCGGGCAGGTCGAAAGCCAGGCGCGCCACCAGCTCGGTACCATCCTGCTGGTCGAGGCGCGCAGGGGGTATCAGCTGGTCGCCGAGGAACAGGGCCCAGTGCGGGGTGATGCGTGATGAATAGGCGCCGCTGGCCAGCTTCTGGTCCAGTTGCACACGGTAGCTGAGGCTGGTCTTGCCGGCCGCTGGCTGCCAGATACCACGTTGC  >  NC_002947/5205921‑5206208                                                                                                                                                |                                                                                                                                                 tCGAACAGGCGCGACACGTTGTCGATGCGAAACTTCCCCTTGCCGATGCGCGGCCAGGAGGTTTCGATGCTCTTCCAGCCCTCGGGCAGGTCGAAAGCCAGGCGCGCCACCAGCTCGGTACCATCCTGCTGGTCGAGGCGCGCAgggg                                                                                                                                              <  1:86069/148‑1 (MQ=255)           gcgACACGTTGTCGATGCGAAACTTCCCCTTGCCGATGCGCGGCCAGGAGGTTTCGATGCTCTTCCAGCCCTCGGGCAGGTCGAAAGCCAGGCGCGCCACCAGCTCGGTACCATCCTGCTGGTCGAGGCGCGCAGGGGGTATCAGCTg                                                                                                                                    <  8:56415/148‑1 (MQ=255)                             gAAACTTCCCCTTGCCGATGCGCGGCCAGGAGGTTTCGATGCTCTTCCAGCCCTCGGGCAGGTCGAAAGCCAGGCGCGCCACCAGCTCGGTACCATCCTGCTGGTCGAGGCGCGCAGGGGGTATCAGCTGGTCGCCGAGGACCAGGGc                                                                                                                  >  4:113297/1‑148 (MQ=255)                             gAAACTTCCCCTTGCCGATGCGCGGCCAGGAGGTTTCGATGCTCTTCCAGCCCTCGGGCAGGTCGAAAGCCAGGCGCGCCACCAGCTCGGTACCATCCTGCTGGTCGAGGCGCGCAGGGGGTATCAGCTGGTCGCCGAGGAACAGGGc                                                                                                                  >  3:153475/1‑148 (MQ=255)                                  ttCCCCTTGCCGATGCGCGGCCAGGAGGTTTCGATGCTCTTCCAGCCCTCGGGCAGGTCGAAAGCCAGGCGCGCCACCAGCTCGGTACCATCCTGCTGGTCGAGGCGCGCAGGGGGTATCAGCTGGTCGCCGAGGAACAGGGCCCAGt                                                                                                             >  8:9681/1‑148 (MQ=255)                                        ttGCCGATGCGCGGCCAGGAGGTTTCGATGCTCTTCCAGCCCTCGGGCAGGTCGAAAGCCAGGCGCGCCACCAGCTCGGTACCATCCTGCTGGTCGAGGCGCGCAGGGGGTATCAGCTGGTCGCCGAGGAACAGGGCCCAGTGCgggg                                                                                                       >  3:51417/1‑148 (MQ=255)                                             gATGCGCGGCCAGGAGGTTTCGATGCTCTTCCAGCCCTCGGGCAGGTCGAAAGCCAGGCGCGCCACCAGCTCGGTACCATCCTGCTGGTCGAGGCGCGCAGGGGGTATCAGCTGGTCGCCGAGGAACAGGGCCCAGTGCGGGGTGATg                                                                                                  >  5:151346/1‑148 (MQ=255)                                                  gcgGCCAGGAGGTTTCGATGCTCTTCCAGCCCTCGGGCAGGTCGAAAGCCAGGCGCGCCACCAGCTCGGTACCATCCTGCTGGTCGAGGCGCGCAGGGGGTATCAGCTGGTCGCCGAGGAACAGGGCCCAGTGCGGGGTGATGCGtga                                                                                             <  3:156738/148‑1 (MQ=255)                                                  gcgGCCAGGAGGTGTCGATGCTCTTCCAGCCCTCGGGCAGGTCGAAAGCCAGGCGCGCCACCAGCTCGGTACCATCCTGCTGGTCGAGGCGCGCAGGGGGTATCAGCTGGTCGCCGAGGAACAGGGCCCAGTGCGGGGTGATGCGtga                                                                                             <  7:140618/148‑1 (MQ=255)                                                   cgGCCAGGAGGTTTCGATGCTCTTCCAGCCCTCGGGCAGGTCGAAAGCCAGGCGCGCCACCAGCTCGGTACCATCCTGCTGGTCGAGGCGCGCAGGGGGTATCAGCTGGTCGCCGAGGAACAGGGCCCAGTGCGGGGTGATGCGtgat                                                                                            <  1:35674/148‑1 (MQ=255)                                                        aggaggTTTCGATGCTCTTCCAGCCCTCGGGCAGGTCGAAAGCCAGGCGCGCCACCAGCTCGGTACCATCCTGCTGGTCGAGGCGCGCAGGGGGTATCAGCTGGTCGCCGAGGAACAGGGCCCAGTGCGGGGTGATGCGTGATGAATa                                                                                       <  4:153627/148‑1 (MQ=255)                                                                 cGATGCTCTTCCAGCCCTCGGGCAGGTCGAAAGCCAGGCGCGCCACCAGCTCGGTACCATCCTGCTGGTCGAGGCGCGCAGGGGGTATCAGCTGGTCGCCGAGGAACAGGGCCCAGTGCGGGGTGATGCGTGATGAATAGGcgccgc                                                                               <  7:9681/147‑1 (MQ=255)                                                                   aTGCTCTTCCAGCCCTCGGGCAGGTCGAAAGCCAGGCGCGCCACCAGCTCGGTACCATCCTGCTGGTCGAGGCGCGCAGGGGGTATCAGCTGGTCGCCGAGGAACAGGGCCCAGTGCGGGGTGATGCGTGATGAATAGGCGCCGCTgg                                                                            >  6:24016/1‑148 (MQ=255)                                                                                  tCGGGCAGGTCGAAAGCCAGGCGCGCCACCAGCTCGGTACCATCCTGCTGGTCGAGGCGCGCAGGGGGTATCAGCTGGTCGCCGAGGAACAGGGCCCAGTGCGGGGTGATGCGTGATGAATAGGCGCCGCTGGCCAGCTTCt                                                                   >  8:30833/1‑142 (MQ=255)                                                                                   cGGGCAGGTCGAAAGCCAGGCGCGCCACCAGCTCGGTACCATCCTGCTGGTCGAGGCGCGCAGGGGGTATCAGCTGGTCGCCGAGGAACAGGGCCCAGTGCGGGGTGATGCGTGATGAATAGGCGCCGCTGGCCAGCTTCTg                                                                  <  7:30833/142‑1 (MQ=255)                                                                                     ggCAGGTCGAAAGCCAGGCGCGCCACCAGCTCGGTACCATCCTGCTGGTCGAGGCGCGCAGGGGGTATCAGCTGGTCGCCGAGGAACAGGGCCCAGTGCGGGGTGATGCGTGATGAATAGGCGCCGCTGGCCAGCTTCTGGTCCAGtt                                                          <  6:4975/148‑1 (MQ=255)                                                                                          gTCGAAAGCCAGGCGCGCCACCAGCTCGGTACCATCCTGCTGGTCGAGGCGCGCAGGGGGTATCAGCTGGTCGCCGAGGAACAGGGCCCAGTGCGGGGTGATGCGTGATGAATAGGCGCCGCTGGCCAGCTTCTGGTCCAGTTGcaca                                                     >  5:93704/1‑148 (MQ=255)                                                                                           tCGAAAGCCAGGCGCGCCACCAGCTCGGTACCATCCTGCTGGTCGAGGCGCGCAGGGGGTATCAGCTGGTCGCCGAGGAACAGGGCCCAGTGCGGGGTGATGCGTGATGAATAGGCGCCGCTGGCCAGCTTCTGGTCCAGTTGCacac                                                    >  5:86342/1‑148 (MQ=255)                                                                                           tCGAAAGCCAGGCGCGCCACCAGCTCGGTACCATCCTGCTGGTCGAGGCGCGCAGGGGGTATCAGCTGGTCGCCGAGGAACAGGGCCCAGTGCGGGGTGATGCGGGATGAATAGGCGCCGCTGGCCCGCTTCTGGTCCAGGTGCacac                                                    >  5:86339/1‑148 (MQ=255)                                                                                                 gCCAGGCGCGCCACCAGCTCGGTACCATCCTGCTGGTCGAGGCGCGCAGGGGGTATCAGCTGGTCGCCGAGGAACAGGGCCCAGTGCGGGGTGATGCGTGATGAATAGGCGCCGCTGGCCAGCTTCTGGTCCAGTTGCACACGGTAGc                                              >  3:23674/1‑148 (MQ=255)                                                                                                          gcCACCAGCTCGGTACCATCCTGCTGGTCGAGGCGCGCAGGGGGTATCAGCTGGTCGCCGAGGAACAGGGCCCAGTGCGGGGTGATGCGTGATGAATACGCGCCGCTGGCCCGCTTCTGGTCCAGTTGCACACGGTAGCTGAGGCTgg                                     >  7:54637/1‑148 (MQ=255)                                                                                                          gcCACCAGCTCGGTACCATCCTGCTGGTCGAGGCGCGCAGGGGGTATCAGATGGTCGCCGAGGAACAGGGCCCAGTGCGGGGTGCTGCGTGATGAATAGGCGCCGCTGGCCAGCTTCTGGTCCAGTTGCACACGGTAGCTGAGGCTgg                                     >  8:124272/1‑148 (MQ=255)                                                                                                                            tCCTGCTGGTCGAGGCGCGCAGGGGGTATCAGCTGGTCGCCGAGGAACAGGGCCCAGTGCGGGGTGATGCGTGATGAATAGGCGCCGCTGGCCAGCTTCTGGTCCAGTTGCACACGGTAGCTGAGGCTGGTCTTGCCGGCCgctggct                   <  6:151346/148‑1 (MQ=255)                                                                                                                               tgctgGTCGAGGCGCGCAGGGGGTATCAGCTGGTCGCCGAGGAACAGGGCCCAGTGCGGGGTGATGCGTGATGAATAGGCGCCGCTGGCCAGCTTCTGGTCCAGTTGCACACGGTAGCTGAGGCTGGTCTTGCCGGCCgctggctg                  >  2:129568/1‑146 (MQ=255)                                                                                                                                  tgGTCGAGGCGCGCAGGGGGTATCAGCTGGTCGCCGAGGAACAGGGCCCAGTGCGGGGTGATGCGTGATGAATAGGCGCCGCTGGCCAGCTTCTGGTCCAGTTGCACACGGTAGCTGAGGCTGGTCTTGCCGGCCGCTGGCTGCCa               <  2:89580/146‑1 (MQ=255)                                                                                                                                      cGAGGCGCGCAGGGGGTATCAGCTGGTCGCCGAGGAACAGGGCCCAGTGCGGGGTGATGCGTGATGAATAGGCGCCGCTGGCCAGCTTCTGGTCCAGTTGCACACGGTAGCTGAGGCTGGTCTTGCCGGCCGCTGGCTGCCAGATAcc         >  7:32740/1‑148 (MQ=255)                                                                                                                                             cgcAGGGGGTATCAGCTGGTCGCCGAGGAACAGGGCCCAGTGCGGGGTGATGCGTGATGAATAGGCGCCGCTGGCCAGCTTCTGGTCCAGTTGCACACGGTAGCTGAGGCTGGTCTTGCCGGCCGCTGGCTGCCAGATACCACGTTGc  <  4:153475/148‑1 (MQ=255)                                                                                                                                                |                                                                                                                                                 TCGAACAGGCGCGACACGTTGTCGATGCGAAACTTCCCCTTGCCGATGCGCGGCCAGGAGGTTTCGATGCTCTTCCAGCCCTCGGGCAGGTCGAAAGCCAGGCGCGCCACCAGCTCGGTACCATCCTGCTGGTCGAGGCGCGCAGGGGGTATCAGCTGGTCGCCGAGGAACAGGGCCCAGTGCGGGGTGATGCGTGATGAATAGGCGCCGCTGGCCAGCTTCTGGTCCAGTTGCACACGGTAGCTGAGGCTGGTCTTGCCGGCCGCTGGCTGCCAGATACCACGTTGC  >  NC_002947/5205921‑5206208

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.