New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 84034 = | 31 (0.580) | 3 (0.060) | 3/250 | NT | 8.0% | coding (774/912 nt) | hemF | coproporphyrinogen‑III oxidase |
? | NC_002947 | 84074 = | 40 (0.780) | coding (814/912 nt) | hemF | coproporphyrinogen‑III oxidase |
TTGTTTATCCACAGGCTTACTGGCCGAGCCAGTCGCGGTCTTGCAGGAAGTACTCTGTCAGGCGCGCTTCTTCACTGCCGGGCGCGGCCTTCCAGTCATAACCCCAACGCACCTGCGGTGGCAGCGACATGAGGATGGATTCGGTGCGGCCACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/84188‑84034 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaccgCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAGCCTGTGGATAAACAAGGAGCCGTCATGGACCAGTACGTCGTTTTT > NC_002947/84074‑84218 TTGTTTATCCACAGGCTTACTGGCCGAGCCAGTCGCGGTCTTGCAGGAAGTACTCTGTCAGGCGCGCTTCTTCACTGCCGGGCGCGGCCTTCCAGTCATAACCCCAACGCACCTGCGGTGGCAGCGACATGAGGATGGATTCGGTGCGG > 3:314143/1‑149 GTTTATCCACAGGCTTACTGGCCGAGCCAGTCGCGGTCTTGCAGGAAGTACTCTGTCAGGCGCGCTTCTTCACTGCCGGGCGCGGCCTTCCAGTCATAACCCCAACGCACCTGCGGTGGCAGCGACATGAGGATGGATTCGGTGCGG < 6:70730/147‑1 TTATCCACAGGCTTACTGGCCGAGCCAGTCGCGGTCTTGCAGGAAGTACTCTGTCAGGCGCGCTTCTTCACTGCCGGGCGCGGCCTTCCAGTCATAACCCCAACGCACCTGCGGTGGCAGCGACATGAGGATGGATTCGGTGCGGCCAC > 5:62142/1‑149 TGTCAGGCGCGCTTCTTCACTGCCGGGCGCGGCCTTCCAGTCATAACCCCAACGCACCTGCGGTGGCAGCGACATGAGGATGGATTCGGTGCGGCCAC > 1:168025/1‑98 TGTCAGGCGCGCTTCTTCACTGCCGGGCGCGGCCTTCCAGTCATAACCCCAACGCACCTGCGGTGGCAGCGACATGAGGATGGATTCGGTGCGGCCAC < 2:168025/98‑1 ACCTGCGGTGGCAGCGACATGAGGATGGATTCGGTGCGGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAGCCTG > 2:43952/1‑149 CCTGCGGTGGCAGCGACATGAGGATGGATTCGGTGCGGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAGCCTGT < 1:43952/149‑1 CCTGCGGTGGCAGCGACATGAGGATGGATTCGGTGCGGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAGCCTGT > 4:143233/1‑149 ACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAGCCTGTGGATAAACAAGGAGCCGTCATGGACCAGTACGTCGTTTTT < 3:278394/149‑1 ACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAGCCTGTGGATAAACAAGGAGCCGTCATGGACCAGTACGTCGTTTTT > 3:67981/1‑149 ACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAGCCTGTGGATAAACAAGGAGCCGTCATGGACCAGTACGTCGTTTTT < 4:147088/149‑1 ACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAGCCTGTGGATAAACAAGGAGCCGTCATG < 7:302210/131‑1 ACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAGCCTGTGGATAAACAAGGAGCCGTCATG > 8:302210/1‑131 TTGTTTATCCACAGGCTTACTGGCCGAGCCAGTCGCGGTCTTGCAGGAAGTACTCTGTCAGGCGCGCTTCTTCACTGCCGGGCGCGGCCTTCCAGTCATAACCCCAACGCACCTGCGGTGGCAGCGACATGAGGATGGATTCGGTGCGGCCACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/84188‑84034 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaccgCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAGCCTGTGGATAAACAAGGAGCCGTCATGGACCAGTACGTCGTTTTT > NC_002947/84074‑84218 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |