New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	84034 =	31 (0.580)	3 (0.060)	3/250	NT	8.0%	coding (774/912 nt)	hemF	coproporphyrinogen‑III oxidase
	?	NC_002947	84074 =	40 (0.780)					coding (814/912 nt)	hemF	coproporphyrinogen‑III oxidase

TCGTCGACGCCTACCTGCCAATCGTCCAGCGCCGCAAGAACACGCCCTACACCCCGCAGCAGCGCGAGTTCCAGGAATACCGCCGTGGCCGGTACGTGGAGTTCAACCTGGTCTATGACCGCGGCACCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAGCCTGTG  >  NC_002947/83889‑84179                                                                                                                                                  |                                                                                                                                                  aaaaacgacgtactggtccatgacggctccttgtttatccacaggcttactggccgagccagtcgcggtcttgcaggaagtactctgtcaggcgcgcttcttcactgccgggcgcggccttccagtcataaccccaacgcacctgCGGt                                                                                                                                                <  3:278394‑M1/4‑1 (MQ=255) aaaaacgacgtactggtccatgacggctccttgtttatccacaggcttactggccgagccagtcgcggtcttgcaggaagtactctgtcaggcgcgcttcttcactgccgggcgcggccttccagtcataaccccaacgcacctgCGGt                                                                                                                                                >  3:67981‑M1/146‑149 (MQ=255) aaaaacgacgtactggtccatgacggctccttgtttatccacaggcttactggccgagccagtcgcggtcttgcaggaagtactctgtcaggcgcgcttcttcactgccgggcgcggccttccagtcataaccccaacgcacctgCGGt                                                                                                                                                <  4:147088‑M1/4‑1 (MQ=255)              ccTGCCAATCGTCCAGCGCCGCAAGAACACGCCCTACACCCCGCAGCAGCGCGAGTTCCAGGAATACCGCCGTGGCCGGTACGTGGAGTTCAACCTGGTCTATGACCGCGGCACCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGa                                                                                                                                     <  5:165216/147‑1 (MQ=255)              ccTGCCAATCGTCCAGCGCCGCAAGAACACGCCCTACACCCCGCAGCAGCGCGAGTTCCAGGAATACCGCCGTGGCCGGTACGTGGAGTTCAACCTGGTCTATGACCGCGGCACCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAat                                                                                                                                   >  3:129861/1‑149 (MQ=255)                   catgacggctccttgtttatccacaggcttactggccgagccagtcgcggtcttgcaggaagtactctgtcaggcgcgcttcttcactgccgggcgcggccttccagtcataaccccaacgcacctgCGGt                                                                                                                                                >  8:302210‑M1/128‑131 (MQ=255)                   catgacggctccttgtttatccacaggcttactggccgagccagtcgcggtcttgcaggaagtactctgtcaggcgcgcttcttcactgccgggcgcggccttccagtcataaccccaacgcacctgCGGt                                                                                                                                                <  7:302210‑M1/4‑1 (MQ=255)                    aaTCGTCCAGCGCCGCAAGAACACGCCCTACACCCCGCAGCAGCGCGAGTTCCAGGAATACCGCCGTGGCCGGTACGTGGAGTTCAACCTGGTCTATGACCGCGGCACCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAatccatcc                                                                                                                             <  8:213543/149‑1 (MQ=255)                      tCGTCCAGCGCCGCAAGAACACGCCCTACACCCCGCAGCAGCGCGAGTTCCAGGAATACCGCCGTGGCCGGTACGTGGAGTTCAACCTGGTCTATGACCGCGGCACCCTGTTCGGTCTGCAGTCCGGt                                                                                                                                                <  3:12488/128‑1 (MQ=255)                      tCGTCCAGCGCCGCAAGAACACGCCCTACACCCCGCAGCAGCGCGAGTTCCAGGAATACCGCCGTGGCCGGTACGTGGAGTTCAACCTGGTCTATGACCGCGGCACCCTGTTCGGTCTGCAGTCCGGt                                                                                                                                                >  4:12488/1‑128 (MQ=255)                         tCCAGCGCCGCAAGAACACGCCCTACACCCCGCAGCAGCGCGAGTTCCAGGAATACCGCCGTGGCCGGTACGTGGACTTCAACCAGCTCTATGACCCCGGCACCCTGTTCGGTCAGCAGACCGGTGCCCCCACCGAATCCATCCTCAta                                                                                                                        >  4:226919/1‑148 (MQ=255)                                   cAAGAACACGCCCTACACCCCGCAGCAGCGCGAGTTCCAGGAATACCGCCGTGGCCGGTACGTGGAGTTCAACCTGGTCTATGACCGCGGCACCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCAc                                                                                                              >  8:244213/1‑149 (MQ=255)                                        acacGCCCTACACCCCGCAGCAGCGCGAGTTCCAGGAATACCGCCGTGGCCGGTACGTGGAGTTCAACCTGGTCTATGACCGCGGCGCCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAg                                                                                                         >  4:188113/1‑149 (MQ=255)                                        acacGCCCTACACCCCGCAGCAGCGCGAGTTCCAGGAATACCGCCGTGGCCGGTACGTGGAGTTCAACCTGGTCTATGACCGCGGCACCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAg                                                                                                         >  8:99420/1‑149 (MQ=255)                                         acaggcttactggccgagccagtcgcggtcttgcaggaagtactctgtcaggcgcgcttcttcactgccgggcgcggccttccagtcataaccccaacgcacctgCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAgg                                                                                                        <  1:43952‑M1/44‑1 (MQ=255)                                         acaggcttactggccgagccagtcgcggtcttgcaggaagtactctgtcaggcgcgcttcttcactgccgggcgcggccttccagtcataaccccaacgcacctgCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAgg                                                                                                        >  4:143233‑M1/106‑149 (MQ=255)                                          caggcttactggccgagccagtcgcggtcttgcaggaagtactctgtcaggcgcgcttcttcactgccgggcgcggccttccagtcataaccccaacgcacctgCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGt                                                                                                       >  2:43952‑M1/105‑149 (MQ=255)                                          acGCCCTACACCCCGCAGCAGCGCGAGTTCCAGGAATACAGCCGTGGCCGGTACGTGGAGTTCAACCTGGTCTATGACCGCGGCACCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCTAATCCATCCTCATGTCGCTGCCACCGCAGGt                                                                                                       <  6:176610/149‑1 (MQ=255)                                                  cacCCCGCAGCAGCGCGAGTTCCAGGAATACCGCCGTGGCCGGTACGTGGAGTTCAACCTGGTCTATGACCGCGGCACCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTggg                                                                                               <  6:333322/149‑1 (MQ=255)                                                  cacCCCGCAGCAGCGCGAGTTCCAGGAATACCGCCGTGGCCGGTACGTGGAGTTCAACCTGGTCTATGACCGCGGCACCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTggg                                                                                               <  7:123593/149‑1 (MQ=255)                                                     cccGCAGCAGCGCGAGTTCCAGGAATACCGCCGTGGCCGGTACGTGGAGTTCAACCTGGTCTATGACCGCGGCACCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGtt                                                                                            <  7:99420/149‑1 (MQ=255)                                                            cagcGCGAGTTCCAGGAATACCGCCGTGGCCGGTACGTGGAGTTCAACCTGGTCTATGACCGCGGCACCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTg                                                                                     <  7:244213/149‑1 (MQ=255)                                                                 cgAGTTCCAGGAATACCGCCGTGGCCGGTACGTGGAGTTCAACCTGGTCTATGACCGCGGCACCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAgg                                                                                <  8:28421/149‑1 (MQ=255)                                                                   aGTTCCAGGAATACCGCCGTGGCCGGTACGTGGAGTTCAACCTGGTCTATGACCGCGGCACCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGcc                                                                              <  4:129861/149‑1 (MQ=255)                                                                        cAGGAATACCGCCGTGGCCGGTACGTGGAGTTCAACCTGGTCTATGACCGCGGCACCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGcc                                                                         >  4:168148/1‑149 (MQ=255)                                                                                                 tGGAGTTCAACCTGGTCTATGACCGCGGCACCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGa                                                  >  4:314143/1‑147 (MQ=255)                                                                                                   gAGTTCAACCTGGTCTATGACCGCGGCACCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGTTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACaga                                              <  5:312394/149‑1 (MQ=255)                                                                                                     gTTCAACCTGGTCTATGACCGCGGCACCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACagag                                             >  6:50209/1‑148 (MQ=255)                                                                                                                      aCCGCGGCACCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACcgc                           >  5:19944/1‑149 (MQ=255)                                                                                                                          cgGCACCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTgg                                                                                    <  1:338808/88‑1 (MQ=255)                                                                                                                          cgGCACCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTgg                                                                                    >  2:338808/1‑88 (MQ=255)                                                                                                                          cgGCACCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACt                       >  3:271467/1‑149 (MQ=255)                                                                                                                              aCCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTgaaga                                                             >  6:128000/1‑107 (MQ=255)                                                                                                                              aCCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTgaaga                                                             <  5:128000/107‑1 (MQ=255)                                                                                                                               cccTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTTCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACATAGTACTTCCTGCAAGACCGCGACTGGCTc                  <  3:226919/149‑1 (MQ=255)                                                                                                                                  tGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGc               >  7:74894/1‑149 (MQ=255)                                                                                                                                  tGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGGTTTGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCCCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGc               >  7:70383/1‑149 (MQ=255)                                                                                                                                   gTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGc               >  6:62142/1‑148 (MQ=255)                                                                                                                                       ggTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTgaagaa                                                            <  6:94555/99‑1 (MQ=255)                                                                                                                                         tCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAg        <  3:188113/149‑1 (MQ=255)                                                                                                                                          cTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAGc       <  3:168148/149‑1 (MQ=255)                                                                                                                                             cAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAGCCtg    >  8:315285/1‑149 (MQ=255)                                                                                                                                               gTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAGCCtgtg  >  6:317318/1‑149 (MQ=255)                                                                                                                                               gTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAGCCtgtg  >  3:217088/1‑149 (MQ=255)                                                                                                                                                tCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTaa         <  7:146346/141‑1 (MQ=255)                                                                                                                                                tCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTaa         >  8:146346/1‑141 (MQ=255)                                                                                                                                                  |                                                                                                                                                  TCGTCGACGCCTACCTGCCAATCGTCCAGCGCCGCAAGAACACGCCCTACACCCCGCAGCAGCGCGAGTTCCAGGAATACCGCCGTGGCCGGTACGTGGAGTTCAACCTGGTCTATGACCGCGGCACCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAGCCTGTG  >  NC_002947/83889‑84179

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.