New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	84034 =	31 (0.580)	3 (0.060)	3/250	NT	8.0%	coding (774/912 nt)	hemF	coproporphyrinogen‑III oxidase
	?	NC_002947	84074 =	40 (0.780)					coding (814/912 nt)	hemF	coproporphyrinogen‑III oxidase

ACACGCCCTACACCCCGCAGCAGCGCGAGTTCCAGGAATACCGCCGTGGCCGGTACGTGGAGTTCAACCTGGTCTATGACCGCGGCACCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAGCCTGTGGATAAACAAGGAGCCGTCATGGACCAGTACGTCGTTTTT  >  NC_002947/83928‑84218                                                                                                                                                   |                                                                                                                                                 acacGCCCTACACCCCGCAGCAGCGCGAGTTCCAGGAATACCGCCGTGGCCGGTACGTGGAGTTCAACCTGGTCTATGACCGCGGCGCCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAg                                                                                                                                                >  4:188113/1‑149 (MQ=255) acacGCCCTACACCCCGCAGCAGCGCGAGTTCCAGGAATACCGCCGTGGCCGGTACGTGGAGTTCAACCTGGTCTATGACCGCGGCACCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAg                                                                                                                                                >  8:99420/1‑149 (MQ=255)  acaggcttactggccgagccagtcgcggtcttgcaggaagtactctgtcaggcgcgcttcttcactgccgggcgcggccttccagtcataaccccaacgcacctgCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAgg                                                                                                                                               <  1:43952‑M1/44‑1 (MQ=255)  acaggcttactggccgagccagtcgcggtcttgcaggaagtactctgtcaggcgcgcttcttcactgccgggcgcggccttccagtcataaccccaacgcacctgCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAgg                                                                                                                                               >  4:143233‑M1/106‑149 (MQ=255)   caggcttactggccgagccagtcgcggtcttgcaggaagtactctgtcaggcgcgcttcttcactgccgggcgcggccttccagtcataaccccaacgcacctgCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGt                                                                                                                                              >  2:43952‑M1/105‑149 (MQ=255)   acGCCCTACACCCCGCAGCAGCGCGAGTTCCAGGAATACAGCCGTGGCCGGTACGTGGAGTTCAACCTGGTCTATGACCGCGGCACCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCTAATCCATCCTCATGTCGCTGCCACCGCAGGt                                                                                                                                              <  6:176610/149‑1 (MQ=255)           cacCCCGCAGCAGCGCGAGTTCCAGGAATACCGCCGTGGCCGGTACGTGGAGTTCAACCTGGTCTATGACCGCGGCACCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTggg                                                                                                                                      <  6:333322/149‑1 (MQ=255)           cacCCCGCAGCAGCGCGAGTTCCAGGAATACCGCCGTGGCCGGTACGTGGAGTTCAACCTGGTCTATGACCGCGGCACCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTggg                                                                                                                                      <  7:123593/149‑1 (MQ=255)              cccGCAGCAGCGCGAGTTCCAGGAATACCGCCGTGGCCGGTACGTGGAGTTCAACCTGGTCTATGACCGCGGCACCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGtt                                                                                                                                   <  7:99420/149‑1 (MQ=255)                     cagcGCGAGTTCCAGGAATACCGCCGTGGCCGGTACGTGGAGTTCAACCTGGTCTATGACCGCGGCACCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTg                                                                                                                            <  7:244213/149‑1 (MQ=255)                          cgAGTTCCAGGAATACCGCCGTGGCCGGTACGTGGAGTTCAACCTGGTCTATGACCGCGGCACCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAgg                                                                                                                       <  8:28421/149‑1 (MQ=255)                            aGTTCCAGGAATACCGCCGTGGCCGGTACGTGGAGTTCAACCTGGTCTATGACCGCGGCACCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGcc                                                                                                                     <  4:129861/149‑1 (MQ=255)                                 cAGGAATACCGCCGTGGCCGGTACGTGGAGTTCAACCTGGTCTATGACCGCGGCACCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGcc                                                                                                                >  4:168148/1‑149 (MQ=255)                                                          tGGAGTTCAACCTGGTCTATGACCGCGGCACCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGa                                                                                         >  4:314143/1‑147 (MQ=255)                                                            gAGTTCAACCTGGTCTATGACCGCGGCACCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGTTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACaga                                                                                     <  5:312394/149‑1 (MQ=255)                                                              gTTCAACCTGGTCTATGACCGCGGCACCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACagag                                                                                    >  6:50209/1‑148 (MQ=255)                                                                               aCCGCGGCACCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACcgc                                                                  >  5:19944/1‑149 (MQ=255)                                                                                   cgGCACCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTgg                                                                                                                           <  1:338808/88‑1 (MQ=255)                                                                                   cgGCACCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTgg                                                                                                                           >  2:338808/1‑88 (MQ=255)                                                                                   cgGCACCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACt                                                              >  3:271467/1‑149 (MQ=255)                                                                                       aCCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTgaaga                                                                                                    >  6:128000/1‑107 (MQ=255)                                                                                       aCCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTgaaga                                                                                                    <  5:128000/107‑1 (MQ=255)                                                                                        cccTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTTCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACATAGTACTTCCTGCAAGACCGCGACTGGCTc                                                         <  3:226919/149‑1 (MQ=255)                                                                                           tGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGc                                                      >  7:74894/1‑149 (MQ=255)                                                                                           tGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGGTTTGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCCCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGc                                                      >  7:70383/1‑149 (MQ=255)                                                                                            gTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGc                                                      >  6:62142/1‑148 (MQ=255)                                                                                                ggTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTgaagaa                                                                                                   <  6:94555/99‑1 (MQ=255)                                                                                                  tCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAg                                               <  3:188113/149‑1 (MQ=255)                                                                                                   cTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAGc                                              <  3:168148/149‑1 (MQ=255)                                                                                                      cAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAGCCtg                                           >  8:315285/1‑149 (MQ=255)                                                                                                      acctgcggtggcagcgacatgaggatggattcggtgcggccaccgCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAGCCtg                                           >  2:43952‑M2/46‑149 (MQ=255)                                                                                                       cctgcggtggcagcgacatgaggatggattcggtgcggccaccgCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAGCCtgt                                          >  4:143233‑M2/45‑149 (MQ=255)                                                                                                       cctgcggtggcagcgacatgaggatggattcggtgcggccaccgCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAGCCtgt                                          <  1:43952‑M2/105‑1 (MQ=255)                                                                                                        gTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAGCCtgtg                                         >  3:217088/1‑149 (MQ=255)                                                                                                        gTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAGCCtgtg                                         >  6:317318/1‑149 (MQ=255)                                                                                                         tCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTaa                                                <  7:146346/141‑1 (MQ=255)                                                                                                         tCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTaa                                                >  8:146346/1‑141 (MQ=255)                                                                                                             GTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACa                                                                                       <  2:168025‑M1/98‑1 (MQ=255)                                                                                                             GTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACa                                                                                       >  1:168025‑M1/1‑98 (MQ=255)                                                                                                             GTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAGCCTGTGGATaa                                    >  5:62142‑M1/1‑149 (MQ=255)                                                                                                                 CCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAGCCTGTGGATAAAc                                  <  6:70730‑M1/147‑1 (MQ=255)                                                                                                                 CCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAGCCTGTGGATAAACaa                                >  3:314143‑M1/1‑149 (MQ=255)                                                                                                                     aCCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAGCCTGTGGATAAACAAGGAg                            >  4:297939/1‑149 (MQ=255)                                                                                                                       cGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAGCCTGTGGATAAACAAGGAGcc                          >  4:278394/1‑149 (MQ=255)                                                                                                                            ccatccTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAGCCTGTGGATAAACAAGGAGCCGTCAt                     >  2:62534/1‑149 (MQ=255)                                                                                                                              atccTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTg                                                                           <  7:158414/93‑1 (MQ=255)                                                                                                                              atccTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTg                                                                           >  8:158414/1‑93 (MQ=255)                                                                                                                              atccTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTgg                                                            >  8:9473/1‑108 (MQ=255)                                                                                                                              atccTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTgg                                                            <  7:9473/108‑1 (MQ=255)                                                                                                                              atccTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAGCCTGTGGATAAACAAGGAGCCGTCATg                    >  4:116822/1‑148 (MQ=255)                                                                                                                               tccTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAGCCTGTGGATAAACAAGGAGCCGTCATGGa                  <  1:62534/149‑1 (MQ=255)                                                                                                                                ccTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAGCCTGTGGATAAACAAGGAGCCGTCATGGAc                 >  5:93940/1‑149 (MQ=255)                                                                                                                                ccTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAGCCTGTGGATAAACAAGGAGCCGTCATGGAc                 >  8:23461/1‑149 (MQ=255)                                                                                                                                 cTCATGTCGCAGCCACCGCAGCTGCGTTGGGGTTAAGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGAACTTCCTGAAAGCCCGAGACTGGCTCGGCCAGTAAGACTGTGGATAAACAAGGAGCCGTCATGGAc                 >  4:185143/1‑148 (MQ=255)                                                                                                                                         gCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAGCCTGTGGATAAACAAGGAGCCGTCATGGACCAGTAcgt         <  4:271467/148‑1 (MQ=255)                                                                                                                                               accgCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAGCCTGTGGATAAACAAGGAGCCGTCATg                    >  8:302210‑M2/5‑131 (MQ=255)                                                                                                                                               accgCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAGCCTGTGGATAAACAAGGAGCCGTCATg                    <  7:302210‑M2/127‑1 (MQ=255)                                                                                                                                               accgCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAGCCTGTGGATAAACAAGGAGCCGTCATGGACCAGTACGTCGttttt  <  4:147088‑M2/145‑1 (MQ=255)                                                                                                                                               accgCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAGCCTGTGGATAAACAAGGAGCCGTCATGGACCAGTACGTCGttttt  <  3:278394‑M2/145‑1 (MQ=255)                                                                                                                                               accgCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAGCCTGTGGATAAACAAGGAGCCGTCATGGACCAGTACGTCGttttt  >  3:67981‑M2/5‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                 ACACGCCCTACACCCCGCAGCAGCGCGAGTTCCAGGAATACCGCCGTGGCCGGTACGTGGAGTTCAACCTGGTCTATGACCGCGGCACCCTGTTCGGTCTGCAGTCCGGTGGCCGCACCGAATCCATCCTCATGTCGCTGCCACCGCAGGTGCGTTGGGGTTATGACTGGAAGGCCGCGCCCGGCAGTGAAGAAGCGCGCCTGACAGAGTACTTCCTGCAAGACCGCGACTGGCTCGGCCAGTAAGCCTGTGGATAAACAAGGAGCCGTCATGGACCAGTACGTCGTTTTT  >  NC_002947/83928‑84218

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.