New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 680757	59 (1.100)	4 (0.080)	4/254	NT	6.5%	coding (277/780 nt)	PP_0583	AraC family transcriptional regulator
	?	NC_002947	= 680812	59 (1.140)					coding (332/780 nt)	PP_0583	AraC family transcriptional regulator

AATTCTCCTACGCCATCAGCGGCGTACTCGGCGTGTACACACGCGACGGCAGTTACTTTGCCCCACCGCAGTGGGGGGTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/680605‑680757 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccAGCGGCGTCACTTCCAGCACCCGGCATTGTTCCGGCGCCCATGGGCAGGCATCGCGGCGCACGTACAGGCTGCGCATCTCGGCTTGCATCGAGGTGACCACTTCATGCTCGGCATCGGCGGGGATCCACACCCCCCACTGCGGTGGG  <  NC_002947/680812‑680666                                                                                                                                                                                                                                                                                                              AATTCTCCTACGCCATCAGCGGCGTACTCGGCGTGTACACACGCGACGGCAGTTACTTTGCCCCACCGCAGTGGGGGGTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTG                                                                                                                                                         >  6:225903/1‑149             CCATCAGCGGCGTACTCGGCGTGTACACACGCGACGGCAGTTACTTTGCCCCACCGCAGTGGGGGGTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCAGCGGCGT                                                                                                                                             >  3:92492/1‑149                                                               CCACCGCAGTGGGGGGTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCAGCGGCGTCACTTCCAGCACCCGGCATTGTTCCGGCGCCCATGGGCAGGCATCGCGGC                                                                                           >  6:272481/1‑149                                                                   CGCAGTGGGGGGTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCAGCGGCGTCACTTCCAGCACCCGGCATTGTTCCGGCGCCCATGGGCAGGCATCGCGGCGCAC                                                                                       <  4:92492/149‑1                                                                            GGGTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCAGCGGCGTCACTTCCAGCACCCGGCATTGTTCCGGCGCCCATGGGCAGGCATCGCGGCGCACGTACAGGCT                                                                              <  5:272481/149‑1                                                                                                                                                        CCAGCGGCGTCACTTCCAGCACCCGGCATTGTTCCGGCGCCCATGGGCAGGCATCGCGGCGCACGTACAGGCTGCGCATCTCGGCTTGCATCGAGGTGACCACTTCATGCTCGGCATCGGCGGGGATCCACACCCCCCACTGCGGTGGG  <  8:173670/149‑1                                                                                                                                                                                                                                                                                                              AATTCTCCTACGCCATCAGCGGCGTACTCGGCGTGTACACACGCGACGGCAGTTACTTTGCCCCACCGCAGTGGGGGGTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/680605‑680757 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccAGCGGCGTCACTTCCAGCACCCGGCATTGTTCCGGCGCCCATGGGCAGGCATCGCGGCGCACGTACAGGCTGCGCATCTCGGCTTGCATCGAGGTGACCACTTCATGCTCGGCATCGGCGGGGATCCACACCCCCCACTGCGGTGGG  <  NC_002947/680812‑680666

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.