New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 68075759 (1.100)4 (0.080) 4/254 NT 6.5% coding (277/780 nt) PP_0583 AraC family transcriptional regulator
?NC_002947 = 680812 59 (1.140)coding (332/780 nt) PP_0583 AraC family transcriptional regulator

TCCTACGCCATCAGCGGCGTACTCGGCGTGTACACACGCGACGGCAGTTACTTTGCCCCACCGCAGTGGGGGGTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTGGCGCGCGAGCTGATCAAGCAGTTCTGCCTGTTCCCGGCGGATTACCCAGAGGACGACAGCGCCGAGGCGCGACTGGTAGCGGTGCTGCTCG  >  NC_002947/680610‑680904
                                                                                                                                                   |                                                                                                                                                   
tcCTACGCCATCAGCGGCGTACTCGGCGTGTACACACGCGACGGCAGTTACTTTGCCCCACCGCAGTGGGGGGTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGAAGCCTGTACGTGcgccg                                                                                                                                                    >  3:318835/1‑149 (MQ=255)
  cTACGCCATCAGCGGCGTACTCGGCGTGTACCCACGCGACGGCAGTTACTTTGCCCCACCGCAGTGGGGGGTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGcgccgc                                                                                                                                                   >  2:111066/1‑148 (MQ=255)
  cTACGCCATCAGCGGCGTACTCGGCGTGTACACCCGCGACGGCAGTTACTTTGCCCCACCGCAGTGGGGGGTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGcgccgc                                                                                                                                                   >  7:253722/1‑148 (MQ=255)
    aCGCCATCAGCGGCGTACTCGGCGTGTACACACGCGACGGCAGTTACTTTGCCCCACCGCAGTGGGGGGTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGAt                                                                                                                                                <  5:225903/149‑1 (MQ=255)
     cGCCATCAGCGGCGTACTCGGCGTGTACACACGCGACGGCAGTTACTTTGCCCCACCGCAGTGGGGGGTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGAt                                                                                                                                                <  3:51105/148‑1 (MQ=255)
      gCCATCAGCGGCGTACTCGGCGTGTACACACGCGACGGCAGTTACTTTGCCCCACCGCAGTGGGGGGTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGAtgc                                                                                                                                              <  3:18932/149‑1 (MQ=255)
       ccATCAGCGGCGTACTCGGCGTGTACACACGCGACGGCAGTTACTTTGCCCCACCGCAGTGGGGGGTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCagcggcgt                                                                                                                                             >  3:92492‑M1/1‑141 (MQ=255)
        cATCAGCGGCGAACTCGGCGTGTACACACGCGACGGCAGTTACTTTGCCCCACCGCAGTGGGGGGTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGAtgcct                                                                                                                                            >  8:105814/1‑149 (MQ=255)
              cggcgTACTCGGCGTGTACACACGCGACGGCAGTTACTTTGCCCCACCGCAGTGGGGGGTGTGGATCCCCGCCGATGCGGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCAt                                                                                                                                      <  3:164534/149‑1 (MQ=255)
                      tCGGCGTGTACACACGCGACGGCAGTTACTTTGCCCCACCGCAGTGGGGGGTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCg                                                                                                                              >  6:187903/1‑149 (MQ=255)
                           gtgtACACACGCGACGGCAGTTACTTTGCCCCACCGCAGTGGGGGGTGTGGATACCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAAc                                                                                                                          >  1:42212/1‑148 (MQ=255)
                             gtACACACGCGACGGCAGTTACTTTGCCCCACCGCAGTGGGGGGTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAAt                                                                                                                       >  6:15692/1‑149 (MQ=255)
                                cacacGCGACGGCAGTTACTTTGCCCCACCGCAGTGGGGGGTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCGATGGGCGCCGGAACAATGcc                                                                                                                    <  6:113822/149‑1 (MQ=255)
                                cacacGCGACGGCAGTTACTTTGCCCCACCGCAGTGGGGGGTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGcc                                                                                                                    >  4:2569/1‑149 (MQ=255)
                                 acacGCGACGGCAGTTACTTTGCCCCACCGCAGTGGGGGGTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCg                                                                                                                   >  8:132160/1‑149 (MQ=255)
                                  cacGCGACGGCAGTTACTTTGCCCCACCGCAGTGGGGGGTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCgg                                                                                                                  <  3:327130/149‑1 (MQ=255)
                                   acGCGACGGCAGTTACTTTGCCCCACCGCAGTGGGGGGTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCggg                                                                                                                 >  1:337584/1‑149 (MQ=255)
                                   acGCGACGGCAGTTACTTTGCCCCACCGCAGTGGGGGGTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCggg                                                                                                                 >  1:30151/1‑149 (MQ=255)
                                   acGCGACGGCAGTTACTTTGCCCCACCGCAGTGGGGGGTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGAGCCGGAACAATGCCggg                                                                                                                 >  5:135012/1‑149 (MQ=255)
                                       gACGGCAGTTACTTTGCCCCACCGCAGTGGGGGGTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCt                                                                                                             >  3:252403/1‑149 (MQ=255)
                                       gACGGCAGTTACTTTGCCCCACCGCAGTGGGGGGTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCt                                                                                                             >  2:323712/1‑149 (MQ=255)
                                         cGGCAGTTACTTTGCCCCACCGCAGTGGGGGGTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTgg                                                                                                           <  4:54130/149‑1 (MQ=255)
                                           gCAGTTACTTTGCCCCACCGCAGTGGGGGGTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGaa                                                                                                         <  1:323712/149‑1 (MQ=255)
                                            cAGTTACTTTGCCCCACCGCAGTGGGGGGTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAg                                                                                                        <  5:15692/149‑1 (MQ=255)
                                            cAGTTACTTTGCCCCACCGCAGTGGGGGGTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAg                                                                                                        <  7:132160/149‑1 (MQ=255)
                                                 aCTTTGCCCCACCGCAGTGGGGGGTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGAcg                                                                                                   >  3:237555/1‑149 (MQ=255)
                                                        cccACCGCAGTGGGGGGTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTgg                                                                                            <  8:173670‑M2/149‑3 (MQ=255)
                                                         ccACCGCAGTGGGGGGTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCagcggcgtcacttccagcacccggcattgttccggcgcccatgggcaggcatcgcggc                                                                                           >  6:272481‑M1/1‑91 (MQ=255)
                                                             cGCAGTGGGGGGTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCagcggcgtcacttccagcacccggcattgttccggcgcccatgggcaggcatcgcggcgcac                                                                                       <  4:92492‑M1/149‑63 (MQ=255)
                                                                aGTGGGGGGTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTGGCGCGCGAg                                                                                    <  5:187903/149‑1 (MQ=255)
                                                                 gTGGGGGGTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTGGCGCGCGAGc                                                                                   <  4:252403/149‑1 (MQ=255)
                                                                      gggTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCagcggcgtcacttccagcacccggcattgttccggcgcccatgggcaggcatcgcggcgcacgtacaggct                                                                              <  5:272481‑M1/149‑72 (MQ=255)
                                                                      gggTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTGGCGCGCGAGCTGATc                                                                              <  8:253722/149‑1 (MQ=255)
                                                                       ggTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTGGCGCGCGAGCTGATc                                                                              <  2:5837/148‑1 (MQ=255)
                                                                       ggTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTGGCGCGCGAGCTGATc                                                                              >  1:5837/1‑148 (MQ=255)
                                                                         tgtgGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTGGCGCGCGAGCTGATCAAg                                                                           <  7:105814/149‑1 (MQ=255)
                                                                         tgtgGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTGGCGCGCGAGCTGATCAAg                                                                           <  6:112715/149‑1 (MQ=255)
                                                                           tgGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTGGCGCGCGAGCTGATCAAg                                                                           >  1:205903/1‑147 (MQ=255)
                                                                                ccccGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTGGCGCGCGAGCTGATCAAGCAGTTCt                                                                    >  6:173534/1‑149 (MQ=255)
                                                                                  ccgccgATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTGGCGCGCGAGCTGATCAAGCAGTTCTGc                                                                  <  4:237555/149‑1 (MQ=255)
                                                                                    gccgATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTGGCGCGCGAGCTGATCAAGCAGTTCTGCCt                                                                <  7:173670/149‑1 (MQ=255)
                                                                                             gAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTGGCGCGCGAGCTGATCAAGCAGTTCTGCCTGTTCCcggc                                                       >  3:97625/1‑149 (MQ=255)
                                                                                                 aTGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTGGCGCGCGAGCTGATCAAGCAGTTCTGCCTGTTCCCGGCGGAt                                                   <  4:97625/149‑1 (MQ=255)
                                                                                                   gAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTGGCGCGCGAGCTGATCAAGCAGTTCTGCCTGTTCCCGGCGGATTa                                                 >  5:24299/1‑149 (MQ=255)
                                                                                                       tGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTGGCGCGCGAGCTGATCAAGCAGTTCTGCCTGTTCCCGGCGGATTAcc                                               >  5:133536/1‑147 (MQ=255)
                                                                                                       tGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTGGCGCGCGAGCTGATCAAGCAGTTCTGCCTGTTCCCGGCGGATTACCCa                                             <  3:91262/149‑1 (MQ=255)
                                                                                                         gTCACCTCGATGCAAGCCTAGATGCGCAGCCTGTACGTGCGACGCGATGCCTGCACATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCAGCTGGCGCGCGAGCTGATCAAGCAGTTCTGCCTGTTCCCGGCGGATTACCCaga                                           <  4:318835/149‑1 (MQ=255)
                                                                                                         gTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTGGCGCGCGAGCTGATCAAGCa                                                                         >  6:150958/1‑119 (MQ=255)
                                                                                                         gTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTGGCGCGCGAGCTGATCAAGCa                                                                         <  5:150958/119‑1 (MQ=255)
                                                                                                         gTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTGGCGCGCGAGCTGATCAAGCAGTTCTGCCTGTTCCCGGCGGATTACCCa                                             >  2:43910/1‑147 (MQ=255)
                                                                                                           cACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTGGCGCGCGAGCTGATCAAGCAGTTCTGCCTGTTCCCGGCGGATTACCCagag                                          >  6:97776/1‑148 (MQ=255)
                                                                                                            aCCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTGGCGCGCGAGCTGATCAAGCAGTTCTGCCTGTTCCCGGCGGATTACCCAGAGga                                        >  5:15258/1‑149 (MQ=255)
                                                                                                              cTCGATGCAAGCCGAGATGCGCAGACTGTACGTGCGCCGCGATGCCTGCCAATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTGGCGCGCGAGCTGATCAAGAAGTTCTGCCTGTTCCCGGCGGATTACCCagagtcc                                       >  7:211472/1‑145 (MQ=255)
                                                                                                               tCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTGGCGCGCGAGCTGATCAAGCAGTTCTGCCTGTTCCCGGCGGATTACCCAGAGgacga                                     >  3:295017/1‑149 (MQ=255)
                                                                                                                 gATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTGGCGCGCGAGCTGATCAAGCAGTTCTGCCTGTTCCCGGCGGATTACCCAGAGgacgac                                    <  3:319054/148‑1 (MQ=255)
                                                                                                                 gATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTGGCGCGCGAGCTGATCAAGCAGTTCTGCCTGTTCCCGGCGGATTACCCAGAGgacga                                     >  8:77441/1‑147 (MQ=255)
                                                                                                                  aTGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTGGCGCGCGAGCTGATCAAGCAGTTCTGCCTGTTCCCGGCGGATTACCCagag                                          <  8:215743/141‑1 (MQ=255)
                                                                                                                  aTGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTGGCGCGCGAGCTGATCAAGCAGTTCTGCCTGTTCCCGGCGGATTACCCagag                                          >  7:215743/1‑141 (MQ=255)
                                                                                                                     cAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTGGCGCGCGAGCTGATCAAGCAGTTCTGCCTGTTCCCGGCGGATTACCCAGAGGACGACAgcgc                               <  7:77441/149‑1 (MQ=255)
                                                                                                                        gCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTGGCGCGCGAGCTGATCAAGCAGTTCTGCCTGTTCCCGGCGGATTACCCAGAGGACGACAGCGcc                              >  3:169707/1‑147 (MQ=255)
                                                                                                                         ccGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTGGCGCGCGAGCTGATCAAGCAGTTCTGCCTGTTCCCGGCGGATTACCCAGAGGACGACAGCGCCGAg                           <  6:15258/149‑1 (MQ=255)
                                                                                                                          cGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTGGCGCGCGAGCTGATCAAGCAGTTCTGCCTGTTCCCGGCGGATTACCCAGAGGACGACAGCGCCGAgg                          <  1:43910/149‑1 (MQ=255)
                                                                                                                           gagaTGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTGGCGCGCGAGCTGATCAAGCAGTTCTGCCTGTTCCCGGCGGATTACCCAGAGGACGACAGCGCCGAGgc                         <  2:30151/149‑1 (MQ=255)
                                                                                                                            agaTGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTGGCGCGCGAGCTGATCAAGCAGTTCTGCCTGTTCCCGGCGGATTACCCAGAGGACGACAGCGCCGAGgcg                        <  5:97776/149‑1 (MQ=255)
                                                                                                                                 cgcAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTGGCGCGCGAGCTGATCAAGCAGTTCTGCCTGTTCCCGGCGGATTACCCAGAGGACGACAGCGCCGAGGCGCGAc                    <  2:42212/148‑1 (MQ=255)
                                                                                                                                 cgcAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTGGCGCGCGAGCTGATCAAGCAGTTCTGCCTGTTCCCGGCGGATTACCCAGAGGACGACAGCGCCGAGGCGCGAc                    <  4:295017/148‑1 (MQ=255)
                                                                                                                                    aGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTggcgcacgtacaggctgcgcatctcggcttgcatcgaggtgaccacttcatgctcggcatcggcggggatccacaccc                <  5:272481‑M2/149‑79 (MQ=255)
                                                                                                                                      ccTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTGGCGCGCGAGCTGATCAAGCAGTTCTGCCTGTTCCCGGCGGATTACCCAGAGGACGATAGCGCCGAGGCGCGACTGGTAg              >  8:227949/1‑149 (MQ=255)
                                                                                                                                         gTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTGGCGCGCGAGCTGATCAAGCAGTTCTGCCTGTTCCCGGCGGATTACCCAGAGGACGACAGCGCCGAGGCGCGACTGGTAGCgg           >  6:130131/1‑149 (MQ=255)
                                                                                                                                          tACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTGGCGCGCGAGCTGATCAAGCAGTTCTGCCTGTTCCCGGCGGATTACCCAGAGGACGACAGCGCCGAGGCGCGACTGGTAGCGGt          <  5:173534/149‑1 (MQ=255)
                                                                                                                                             gTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTggcgcacgtacaggctgcgcatctcggcttgcatcgaggtgaccacttcatgctcggcatcggcggggatccacaccccccactgcg       <  4:92492‑M2/149‑88 (MQ=255)
                                                                                                                                                 gccgcGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTggcgcacgtacaggctgcgcatctcggcttgcatcgaggtgaccacttcatgctcggcatcggcggggatccacaccccccactgcggtgg   >  6:272481‑M2/1‑58 (MQ=255)
                                                                                                                                                  ccagcggcgtcacttccagcacccggcattgttccggcgcccatgggcaggcatcgcggcgcacgtacaggctgcgcatctcggcttgcatcgaggtgaccacttcatgctcggcatcggcggggatccacaccccccactgcggtggg  <  8:173670‑M1/149‑148 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
TCCTACGCCATCAGCGGCGTACTCGGCGTGTACACACGCGACGGCAGTTACTTTGCCCCACCGCAGTGGGGGGTGTGGATCCCCGCCGATGCCGAGCATGAAGTGGTCACCTCGATGCAAGCCGAGATGCGCAGCCTGTACGTGCGCCGCGATGCCTGCCCATGGGCGCCGGAACAATGCCGGGTGCTGGAAGTGACGCCGCTGGCGCGCGAGCTGATCAAGCAGTTCTGCCTGTTCCCGGCGGATTACCCAGAGGACGACAGCGCCGAGGCGCGACTGGTAGCGGTGCTGCTCG  >  NC_002947/680610‑680904

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.