New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1410949 = | 46 (0.850) | 3 (0.060) | 3/248 | NT | 6.5% | coding (986/1437 nt) | PP_1232 | hypothetical protein |
? | NC_002947 | 1411020 = | 43 (0.850) | coding (915/1437 nt) | PP_1232 | hypothetical protein |
AGGGCACACCGGGGCTTGCCGCCAAGCGCTTCCGCGCCCAACTGGACGAAGACCCAAAGCTGGACGCCGCACGTTATGGCCTGGCCTTGGCACAGGTCAAGGGCGGGCAATTGAACGAGGCCCGTGAAATGCTCAAGCCGCTGCTGGCCAAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1411102‑1410949 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaaggcCAGGCCATAACGTGCGGCGTCCAGCTTTGGGTCTTCGTCCAGTTGGGCGCGGAAGCGCTTGGCGGCAAGCCCCGGTGTGCCCTCGTAGATCAGTGCCACCCGGGCGCGGATCAGTTGGTAGCGCATGCTGTCTTCAATGCCACCCTT > NC_002947/1411020‑1411166 AGGGCACACCGGGGCTTGCCGCCAAGCGCTTCCGCGCCCAACTGGACGAAGACCCAAAGCTGGACGCCGCACGTTATGGCCTGGCCTTGGCACAGGTCAAGGGCGGGCAATTGAACGAGGCCCGTGAAATGCTCAAGCCGCTGCTGGC > 2:33351/1‑148 CTGGCCTTGGCACAGGTCAAGGGCGGGCAATTGAACGAGGCCCGTGAAATGCTCAAGCCGCTGCTGGCCAAGGCCAGGCCATAACGTGCGGCGTCCAGCTTTGGGTCTTCGTCCAGTTGGGCGCGGAAGCGCTTGGCGGCAAGCCCCGG > 5:311994/1‑149 CTTGGCACAGGTCAAGGGCGGGCAATTGAACGAGGCCCGTGAAATGCTCAAGCCGCTGCTGGCCAAGGCCAGGCCATAACGTGCGGCGTCCAGCTTTGGGTCTTCGTCCAGTTGGGCGCGGAAGCGCTTGGCGGCAAGCCCCGGTGTGC > 2:30828/1‑149 AGGGCGGGCAATTGAACGAGGCCCGTGAAATGCTCAAGCCGCTGCTGGCCAAGGCCAGGCCATAACGTGCGGCGTCCAGCTTTGGGTCTTCGTCCAGTTGGGCGCGGAAGCGCTTGGCGGCAAGCCCCGGTGTGCCCTCGTAGATCAGT < 6:311994/149‑1 GCCAGGCCATAACGTGCGGCGTCCAGCTTTGGGTCTTCGTCCAGTTGGGCGCGGAAGCGCTTGGCGGCAAGCCCCGGTGTGCCCTCGTAGATCAGTGCCACCCGGGCGCGGATCAGTTGGTAGCGCATGCTGTCTTCAATGCCACCCTT > 3:281154/1‑149 AGGGCACACCGGGGCTTGCCGCCAAGCGCTTCCGCGCCCAACTGGACGAAGACCCAAAGCTGGACGCCGCACGTTATGGCCTGGCCTTGGCACAGGTCAAGGGCGGGCAATTGAACGAGGCCCGTGAAATGCTCAAGCCGCTGCTGGCCAAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1411102‑1410949 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaaggcCAGGCCATAACGTGCGGCGTCCAGCTTTGGGTCTTCGTCCAGTTGGGCGCGGAAGCGCTTGGCGGCAAGCCCCGGTGTGCCCTCGTAGATCAGTGCCACCCGGGCGCGGATCAGTTGGTAGCGCATGCTGTCTTCAATGCCACCCTT > NC_002947/1411020‑1411166 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |