| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1456018 | 27 (0.500) | 3 (0.060) | 3/236 | NT | 8.1% | intergenic (+97/+152) | PP_1273/PP_1274 | multidrug MFS transporter outer membrane protein/short‑chain dehydrogenase/reductase family oxidoreductase |
| ? | NC_002947 | = 1456062 | 44 (0.910) | intergenic (+141/+108) | PP_1273/PP_1274 | multidrug MFS transporter outer membrane protein/short‑chain dehydrogenase/reductase family oxidoreductase | |||||
GTACAAGGCGCTGGGTGGAGGCTGGCAGGCGTTTGATGAGCCGCCGCCGAATGCTCACGGTTAGAGAGGACGCGCAGTATCTGGAGGGCGGGGTACTGCGGTCCATGGCATGATGCTTTACAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1455858‑1456018‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacccgctcctacaCCAGATTGGTGGTGGACACACATCGGTGGTTGGACACAGGCCGCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGTACAGGCTGTAAAGCATCATGCCATGGACCGCAGTACCCCGCCCTCCAGATACTGCGCGTCCTCTCTAACCG < NC_002947/1456062‑1455915 GTACAAGGCGCTGGGTGGAGGCTGGCAGGCGTTTGATGAGCCGCCGCCGAATGCTCACGGTTAGAGAGGACGCGCAGTATCTGGAGGGCGGGGTACTGCGGTCCATGGCATGATGCTTTACAGCCTGTACTGGCCTCTTCGCGGGTGAA > 2:259887/1‑149GTACAAGGCGCTGGGTGGAGGCTGGCAGGCGTTTGATGAGCCGCCGCCGAATGCTCACGGTTAGAGAGGACGCGCAGTATCTGGAGGGCGGGGTACTGCGGTCCATGGCATGATGCTTTACAGCCTGTACTGGCCTCTTCGCGGGTGAA > 3:9551/1‑149 GCTGGGTGGAGGCTGGCAGGCGTTTGATGAGCCGCCGCCGAATGCTCACGGTTAGAGAGGACGCGCAGTATCTGGAGGGCGGGGTACTGCGGTCCATGGCATGATGCTTTACAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCC > 1:21698/1‑148 GCTGGGTGGAGGCTGGCAGGCGTTTGATGAGCCGCCGCCGAATGCTCACGGTTAGAGAGGACGCGCAGTATCTGGAGGGCGGGGTACTGCGGTCCATGGCATGATGCTTTACAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCC > 3:154470/1‑148 CTGGGTGGTGGCTGGCAGGCGGTTGTTGAGCCGCCGCCGAATGCTCACGGTTAGAGAGGACGCGCAGTATCTGGAGGGCGGGGTACTGCGGTCCATGGCATGATGCTTTACAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTA < 7:269345/149‑1 CTGGGTGGAGGCTGGCAGGCGTTTGATGAGCCGCCGCCGAATGCTCACGGTTAGAGAGGACGCGCAGTATCTGGAGGGCGGGGTACTGCGGTCCATGGCATGATGCTTTACAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC < 3:153592/146‑1 CTGGGTGGAGGCTGGCAGGCGTTTGATGAGCCGCCGCCGAATGCTCACGGTTAGAGAGGACGCGCAGTATCTGGAGGGCGGGGTACTGCGGTCCATGGCATGATGCTTTACAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTC > 4:153592/1‑146 AGAGGACGCGCAGTATCTGGAGGGCGGGGTACTGCGGTCCATGGCATGATGCTTTACAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACACCAGATTGGTGGTGGACACACATCGGTGGTTGGACACAGGCCGCTGTAGGAG > 3:308160/1‑149 GGACGCGCAGTATCTGGAGGGCGGGGTACTGCGGTCCATGGCATGATGCTTTACAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACACCAGATTGGTGGTGGACACACATCGGTGGTTGGACACAGGCCGCTGTAGGAGCG < 4:308160/148‑1 GACGCGCAGTATCTGGAGGGCGGGGTACTGCGGTCCATGGCATGATGCTTTACAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACACCAGATTGGTGGTGGACACACATCGGTGGTTGGACACAGGCCGCTGTAGGAGCGGG < 3:192269/149‑1 CTACACCAGATTGGTGGTGGACCCACATCGGTGGTTGGACCCAGGACGCTGTAGGAGCTGGTTCACCCGCGAAGAGGCCAGTACAGGCTGTAAAGCATCATGCCATGGACCGCAGTACCCCGCCCTCCAGATACTGCGCGTCCTCTC < 8:248832/147‑1 CTACACCAGATTGGTGGTGGACACACATCGGTGGTTGGACACAGGCCGCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGTACAGGCTGTAAAGCATCATGCCATGGACCGCAGTACCCCGCCCTCCAGATACTGCGCGTC > 5:236235/1‑142 CTACACCAGATTGGTGGTGGACACACATCGGTGGTTGGACACAGGCCGCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGTACAGGCTGTAAAGCATCATGCCATGGACCGCAGTACCCCGCCCTCCAGATACTGCGCGTC < 6:236235/142‑1 CACCAGATTGGTGGTGGACACACATCGGTGGTTGGACACAGGCCGCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGTACAGGCTGTAAAGCATCATGCCATGGACCGCAGTACCCCGCCCTCCAGATACTGCGCGTCCTCTCTAACC > 3:235343/1‑149 CACCAGATTGGTGGTGGACACACATCGGTGGTTGGACACAGGCCGCTGTAGGAGCGGGTACACCCGCGAAGAGGCCACTACAGGCTGTAAAGCATCATGCCATGGACCGCAGTACCCCGCCCTCCAGATACTGCGCGTCCTCTCTAACC < 1:107041/149‑1 ACCAGATTGGTGGTGGACACACATCGGTGGTTGGACACAGGCCGCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGTACAGGCTGTAAAGCATCATGCCATGGACCGCAGTACCCCGCCCTCCAGATACTGCGCGTCCTCTCTAACCG > 1:259887/1‑149 GTACAAGGCGCTGGGTGGAGGCTGGCAGGCGTTTGATGAGCCGCCGCCGAATGCTCACGGTTAGAGAGGACGCGCAGTATCTGGAGGGCGGGGTACTGCGGTCCATGGCATGATGCTTTACAGCCTGTACTGGCCTCTTCGCGGGTGAACCCGCTCCTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1455858‑1456018‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacccgctcctacaCCAGATTGGTGGTGGACACACATCGGTGGTTGGACACAGGCCGCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGTACAGGCTGTAAAGCATCATGCCATGGACCGCAGTACCCCGCCCTCCAGATACTGCGCGTCCTCTCTAACCG < NC_002947/1456062‑1455915 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |