| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1775743 | 33 (0.610) | 3 (0.060) | 3/248 | NT | 8.7% | coding (923/1077 nt) | PP_1582 | hypothetical protein |
| ? | NC_002947 | = 1775769 | 32 (0.630) | coding (949/1077 nt) | PP_1582 | hypothetical protein | |||||
TACACCGTTCCAGCGCCTGCCGGCGGCGCCAAGTTCCGAAATGCCGCACTTGTCCCGGATGGGCGGGTGTTCTTCGGTCCTTCAACCTACGACCGCCTAGGTTGGTACAACCCGGCGACCGACTCTTATGAAGAGGGCGATCCTCTTGGCCTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1775589‑1775743‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctgggCAATACCGGCAAACTTGACCACGCTTCCCAGGCCAAGAGGATCGCCCTCTTCATAAGAGTCGGTCGCCGGGTTGTACCAACCTAGGCGGTCGTAGGTTGAAGGACCGAAGAACACCCGCCCATCCGGGACAAGTGCGGCATTTCG < NC_002947/1775769‑1775625 TACACCGTTCCAGCGCCTGCCGGCGGCGCCAAGTTCCGAAATGCCGCACTTGTCCCGGATGGGCGGGTGTTCTTCGGTCCTTCAACCTACGACCGCCTAGGTTGGTACAACCCGGCGACCGACTCTTATGAAGAGGGCGATCCTCTTGG > 2:151889/1‑149TACACCGTTCCAGCGCCTGCCGGCGGCGCCAAGTTCCGAAATGCCGCACTTGTCCCGGATGGGCGGGTGTTCTTCGGTCCTTCAACCTACGACCGCCTAGGTTGGTACAACCCGGCGACCGACTCTTATGAAGAGGGCGATCCTCTTGG > 2:248394/1‑149 CACCGTTCCAGCGCCTGCCGGCGGCGCCAAGTTCCGAAATGCCGCACTTGTCCCGGATGGGCGGGTGTTCTTCGGTCCTTCAACCTACGACCGCCTAGGTTGGTACAACCCGGCGACCGACTCTTATGAAGAGGGCGATCCTCTTGGCC > 3:108022/1‑149 CACCGTTCCAGCGCCTGCCGGCGGCGCCAAGTTCCGAAATGCCGCACTTGTCCCGGATGGGCGGGTGTTCTTCGGTCCTTCAACCTACGACCGCCTAGGTTGGTACAACCCGGCGACCGACTCTTATGAAGAGGGCGATCCTCTTGG < 6:111547/147‑1 CACCGTTCCAGCGCCTGCCGGCGGCGCCAAGTTCCGAAATGCCGCACTTGTCCCGGATGGGCGGGTGTTCTTCGGTCCTTCAACCTACGACCGCCTAGGTTGGTACAACCCGGCGACCGACTCTTATGAAGAGGGCGATCCTCTTGG < 7:32083/147‑1 ACCGTTCCAGCGCCTGCCGGCGGCGCCAAGTTCCGAAATGCCGCACTTGTCCCGGATGGGCGGGTGTTCTTCGGTCCTTCAACCTACGACCGCCTAGGTTGGTACAACCCGGCGACCGACTCTTATGAAGAGGGCGATCCTCTTGGCCT > 4:116122/1‑149 ACCGTTCCAGCGCCTGCCGGCGGCGCCAAGTTCCGAAATGCCGCACTTGTCCCGGATGGGCGGGTGTTCTTCGGTCCTTCAACCTACGACCGCCTAGGTTGGTACAACCCGGCGACCGACTCTTATGAAGAGGGCGATCCTCTTGGCCT < 6:198667/149‑1 CGTTCCAGGGCCTGCCGTCGGCGCCAAGTTCCGTAATGCCGCACTTGTCCCGGATGGGCGGGTGTTCTTCGGTCCTTCAACCTACGACCGCCTAGGTTGGTACAACCCGGCGACCGACTCTTATGATGAGGGCGATCCTCTTGGCCTGG < 2:78275/149‑1 AGCGCCTGCCGGCGGCGCCAAGTTCCGAAATGCCGCACTTGTCCCGGATGGGCGGGTGTTCTTCGGTCCTTCAACCTACGACCGCCTAGGTTGGTACAACCCGGCGACCGACTCTTATGAAGAGGGCGATCCTCTTGGCCTGGGCAATA > 3:237429/1‑149 AATGCCGCACTTGTCCCGGATGGGCGGGTGTTCTTCGGTCCTTCAACCTACGACCGCCTAGGTTGGTACAACCCGGCGACCGACTCTTATGAAGAGGGCGATCCTCTTGGCCTGGGCAATACCGGCAAACTTGACCACGCTTCCCAGGC < 4:237429/149‑1 CCGCACTTGTCCCGGATGGGCGGGTGTTCTTCGGTCCTTCAACCTACGACCGCCTAGGTTGGTACAACCCGGCGACCGACTCTTATGAAGAGGGCGATCCTCTTGGCCTGGGCAATACCGGCAAACTTGACCACGCTTCCCAGGCCAA < 3:116122/148‑1 CGCACTTGTCCCGGATGGGCGGGTGTTCTTCGGTCCTTCAACCTACGACCGCCTAGGTTGGTACAACCCGGCGACCGACTCTTATGAAGAGGGCGATCCTCTTGGCCTGGGCAATACCGGCAAACTTGACCACGCTTCCCAGGCCAAGA < 1:151889/149‑1 GGCAATACCGGCAAACTTGACCACGCATCCCAGGCCAAGAGGATCGCCCTCTTCATAAGAGTCGGTCGCCGGGTTGTACCAACCTAGGCGGTCGTAGGTTGAAGGACCGAAGAACACCCGCCCATCCGGGACAAGTGCGGCATTTCG < 4:223077/147‑1 TACACCGTTCCAGCGCCTGCCGGCGGCGCCAAGTTCCGAAATGCCGCACTTGTCCCGGATGGGCGGGTGTTCTTCGGTCCTTCAACCTACGACCGCCTAGGTTGGTACAACCCGGCGACCGACTCTTATGAAGAGGGCGATCCTCTTGGCCTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1775589‑1775743‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctgggCAATACCGGCAAACTTGACCACGCTTCCCAGGCCAAGAGGATCGCCCTCTTCATAAGAGTCGGTCGCCGGGTTGTACCAACCTAGGCGGTCGTAGGTTGAAGGACCGAAGAACACCCGCCCATCCGGGACAAGTGCGGCATTTCG < NC_002947/1775769‑1775625 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |