New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1775743	33 (0.610)	3 (0.060)	3/248	NT	8.7%	coding (923/1077 nt)	PP_1582	hypothetical protein
	?	NC_002947	= 1775769	32 (0.630)					coding (949/1077 nt)	PP_1582	hypothetical protein

CGAAATGCCGCACTTGTCCCGGATGGGCGGGTGTTCTTCGGTCCTTCAACCTACGACCGCCTAGGTTGGTACAACCCGGCGACCGACTCTTATGAAGAGGGCGATCCTCTTGGCCTGGGAAGCGTGGTCAAGTTTGCCGGTATTGCCCAGGCCGCCAATGGAGAACTGATCCTCGCCCCCCATGTAAATGAGGCGGTTGGCCGCATCAAGGCTGTTTCCGCTGGTGCGCTACCTGCTGCAGCGATGACCAGTATCCAGTGGAACAAGAACTGATCGAGCCAGACCTACCCA  >  NC_002947/1775625‑1775915                                                                                                                                                 |                                                                                                                                                   cGAAATGCCGCACTTGTCCCGGATGGGCGGGTGTTCTTCGGTCCTTCAACCTACGACCGCCTAGGTTGGTACAACCCGGCGACCGACTCTTATGAAGAGGGCGATCCTCTTGGCCTGGGATGCGTGGTCAAGTTTGCCGGTATTGcc                                                                                                                                                  <  4:223077‑M2/147‑3 (MQ=255)        ccGCACTTGTCCCGGATGGGCGGGTGTTCTTCGGTCCTTCAACCTACGACCGCCTAGGTTGGTACAACCCGGCGACCGACTCTTATGAAGAGGGCGATCCTCTTGGCCTGGGAAGCGTGGTCAAGTTTGCCGGTATTGCCCAGgccgc                                                                                                                                          <  4:108022/148‑1 (MQ=255)          gCACTTGTCCCGGATGGGCGGGTGTTCTTCGGTCCTTCAACCTACGACCGCCTAGGTTGGTACAACCCGGCGACCGACTCTTATGAAGAGGGCGATCCTCTTGGCCTGGGAAGCGTGGTCAAGTTTGCCGGTATTGCCCAGGCCGCCaa                                                                                                                                       <  1:248394/149‑1 (MQ=255)          gCACTTGTCCCGGATGGGCGGGTGTTCTTCGGTCCTTCAACCTACGACCGCCTAGGTTGGTACAACCCGGCGACCGACTCTTATGAAGAGGGCGATCCTCTTGGCCTGGGAAGCGTGGTCAAGTTTGCCGGTATTGCCCAGGCCGCCaa                                                                                                                                       <  8:202742/149‑1 (MQ=255)          gCACTTGTCCCGGATGGGCGGGTGTTCTTCGGTCCTTCAACCTACGACCGCCTAGGTTGGTACAACCCGGCGACCGACTCTTATGAAGAGGGCGATCCTCTTGGCCTGGGAAGCGTGGTCAAGTTTGCCGGTATTGCCCAGGCCGCCaa                                                                                                                                       >  6:128465/1‑149 (MQ=255)            aCTTGTCCCGTATGGGCGGGTGTTCTTCGGTCCTTCAACCTACGACCGCCTAGGTTGGTACAACCCGGCGACCGACTCTTATGAAGAGGGCGATCCTCTTGGCCTGGGAAGCGTGGTCAAGTTTGCCGGTATTGCCCAGGCCGCCAATg                                                                                                                                     <  5:4263/149‑1 (MQ=255)             cTTGTCCCGGATGGGCGGGTGTTCTTCGGTCCTTCAACCTACGACCGCCTAGGTTGGTACAACCCGGCGACCGACTCTTATGAAGAGGGCGATCCTCTTGGCCTGGGAAGCGTGGTCAAGTTTGCCGGTATTGCCCAGGCCGCCAATgg                                                                                                                                    <  5:294611/149‑1 (MQ=255)                 tCCCGGATGGGCGGGTGTTCTTCGGTCCTTCAACCTACGACCGCCTAGGTTGGTACAACCCGGCGACCGACTCTTATGAAGAGGGCGATCCTCTTGGCCTGGGAAGCGTGGTCAAGTTTGCCGGTATTGCCCAGGCCGCCAATGGAGaa                                                                                                                                <  1:96191/149‑1 (MQ=255)                           gCGGGTGTTCTTCGGTCCTTCAACCTACGACCGCCTAGGTTGGTACAACCCGGCGACCGACTCTTATGAAGAGGGCGATCCTCTTGGCCTGGGAAGCGTGGTCAAGTTTGCCGGTATTGCCCAGGCCGCCAATGGAGAACTGATCCTCg                                                                                                                      >  1:166642/1‑149 (MQ=255)                                    cttcGGTCCTTCAACCTACGACCGCCTAGGTTGGTACAACCCGGCGACCGACTCTTATGAAGAGGGCGATCCTCTTGGCCTGGGAAGCGTGGTCAAGTTTGCCGGTATTGCCCAGGCCGCCAATGGAGAACTGATCCTCGCCCCCCATg                                                                                                             >  1:137120/1‑149 (MQ=255)                                         gTCCTTCAACCTACGACCGCCTAGGTTGGTACAACCCGGCGACCGACTCTTATGAAGAGGGCGATCCTCTTGGCCTGGGAAGCGTGGTCAAGTTTGCCGGTATTGCCCAGGCCGCCAATGGAGAACTGATCCTCGCCCCCCATGTAAAt                                                                                                        <  1:199153/149‑1 (MQ=255)                                                    tACGACCGCCTAGGTTGGTACAACCCGGCGACCGACTCTTATGAAGAGGGCGATCCTCTTGGCCTGGGAAGCGTGGTCAAGTTTGCCGGTATTGCCCAGGCCGCCAATGGAGAACTGATCCTCGCCCCCCATGTAAATGAGGCGGTTgg                                                                                             >  5:35409/1‑149 (MQ=255)                                                      cGACCGCCTAGGTTGGTACAACCCGGCGACCGACTCTTATGAAGAGGGCGATCCTCTTGGCCTGGGAAGCGTGGGCAAGTTTGCCGGTATTGCCCAGGCCGCCAATGGAGAACTGATCCTCGCCCCCCATGTAAATGAGGCGGTTGGc                                                                                            <  8:78697/148‑1 (MQ=255)                                                                ggTTGGTACAACCCGGCGACCGACTCTTATGAAGAGGGCGATCCTCTTGGCCTGGGAAGCGTGGTCAAGTTTGCCGGTATTGCCCAGGCCGCCAATGGAGAACTGATCCTCGCCCCCCATGTAAATGAGGCGGTTGGCCGCATCAAgg                                                                                  <  4:296177/148‑1 (MQ=255)                                                                 gTTGGTACAACCCGGCGACCGACTCTTATGAAGAGGGCGATCCTCTTGGCCTGGGAAGCGTGGTCAAGTTTGCCGGTATTGCCCAGGCCGCCAATGGAGAACTGATCCTCGCCCCCCATGTAAATGAGGCGGTTGGCCGCATCAAGGCt                                                                                >  7:309014/1‑149 (MQ=255)                                                                  ttGGTACAACCCGGCGACCGACTCTTATGAAGAGGGCGATCCTCTTGGCCTGGGAAGCGTGGTCAAGTTTGCCGGTATTGCCCAGGCCGCCAATGGAGAACTGATCCTCGCCCCCCATGTAAATGAGGCGGTTGGCCGCATCAAGGCTg                                                                               <  2:166642/149‑1 (MQ=255)                                                                      tACAACCCGGCGACCGACTCTTATGAAGAGGGCGATCCTCTTGGCCTGGGAAGCGTGGTCAAGTTTGCCGGTATTGCCCAGGCCGCCAATGGAGAACTGATCCTCGCCCCCCATGTAAATGAGGCGGTTGGCCGCATCAAGGCTGTTTc                                                                           <  3:223077/149‑1 (MQ=255)                                                                      tACAACCCGGCGACCGACTCTTATGAAGAGGGCGATCCTCTTGGCCTGGGAAGCGTGGTCAAGTTTGCCGGTATTGCCCAGGCCGCCAATGGAGAACTGATCCTCGCCCCCCATGTAAATGAGGCGGTTGGCCGCATCAAGGCTGTTTc                                                                           <  1:186714/149‑1 (MQ=255)                                                                      tACAACCCGGCGACCGACTCTTATGAAGAGGGCGATCCTCTTGGCCTGGGAAGCGTGGTCAAGTTTGCCGGTATTGCCCAGGCCGCCAATGGAGAACTGATCCTCGCCCCCCATGTAAATGAGGCGGTTGGCCGCATCAAGGCTGTTTc                                                                           <  5:128465/149‑1 (MQ=255)                                                                              ggCGACCGACTCTTATGAAGAGGGCGATCCTCTTGGCCTGGGAAGCGTGGTCAAGTTTGCCGGTATTGCCCAGGCCGCCAATGGAGAACTGATCCTCGCCCCCCATGTAAATGAGGCGGTTGGCCGCATCAAGGCTGTTTCCGCTGGTg                                                                   >  8:214229/1‑149 (MQ=255)                                                                                    cgacTCTTATGAAGAGGGCGATCCTCTTGGCCTGGGAAGCGTGGTCAAGTTTGCCGGTATTGCCCAGGCCGCCAATGGAGAACTGATCCTCGCCCCCCATGTAAATGAGGTGGTTGGCCGCATCAAGGCTGTTTCCGCTGGTGCGCTAc                                                             >  4:307945/1‑149 (MQ=255)                                                                                     gacTCTTATGAAGAGGGCGATCCTCTTGGCCTGGGAAGCGTGGTCAAGTTTGCCGGTATTGCCCAGGCCGCCAATGGAGAACTGATCCTCGCCCCCCATGTAAATGAGGCGGTTGGCCGCATCAAGGCTGTTTCCGCTGGTGCGCTAc                                                             >  4:271206/1‑148 (MQ=255)                                                                                        tctTATGAAGAGGGCGATCCTCTTGGCCTGGGAAGCGTGGTCAAGTTTGCCGGTATTGCCCAGGCCGCCAATGGAGAACTGATCCTCGCCCCCCATGTAAATGAGGCGGTTGGCCGCATCAAGGCTGTTTCCGCTGGTGCGCTACctgc                                                         >  1:171590/1‑149 (MQ=255)                                                                                                   gggCGATCCTCTTGGCCTGGGAAGCGTGGTCAAGTTTGCCGGTATTGCCCAGGCCGCCAATGGAGAACTGATCCTCGCCCCCCATGTAAATGAGGCGGTTGGCCGCATCAAGGCTGTTTCCGCTGGTGCGCTACCTGCTGCAGCGATGa                                              >  3:133566/1‑149 (MQ=255)                                                                                                    ggCGATCCTCTTGGCCTGGGAAGCGTGGTCAAGTTTGCCGGTATTGCCCAGGCCGCCAATGGAGAACTGATCCTCGCCCCCCATGTAAATGAGGCGGTTGGCCGCATCAAGGCTGTTTCCGCTGGTGCGCTACCTGCTGCAGCGATGAc                                             >  4:121840/1‑149 (MQ=255)                                                                                                           ctctTGGCCTGGGAAGCGTGGTCAAGTTTGCCGGTATTGCCCAGGCCGCCAATGGAGAACTGATCCTCGCCCCCCATGTAAATGAGGCGGTTGGCCGCATCAAGGCTGTTTCCGCTGGTGCGCTACCTGCTGCAGCGATGACCAGTATc                                      <  4:82920/149‑1 (MQ=255)                                                                                                            tctTGGCCTGGGAAGCGTGGTCAAGTTTGCCGGTATTGcccaggccaagaggatcgccctcttcataagagtcggtcgccgggttgtaccaacctaggcggtcgtaggttgaaggaccgaagaacacccgcccatccgggacaagtgcg                                     <  1:151889‑M2/149‑112 (MQ=255)                                                                                                            tctTGGCCTGGGAAGCGTGGTCAAGTTTGCCGGTATTGCCCAGGCCGCCAATGGAGAACTGATCCTCGCCCCCCATGTAAATGAGGCGGTTGGCCGCATCAAGGCTGTTTCCGCTGGTGCGCTACCTGCTGCAGCGATGACCAGTATc                                      >  7:26845/1‑148 (MQ=255)                                                                                                              ttGGCCTGGGAAGCGTGGTCAAGTTTGCCGGTATTGcccaggccaagaggatcgccctcttcataagagtcggtcgccgggttgtaccaacctaggcggtcgtaggttgaaggaccgaagaacacccgcccatccgggacaagtgcgg                                    <  3:116122‑M2/148‑113 (MQ=255)                                                                                                              ttGGCCTGGGAAGCGTGGTCAAGTTTGCCGGTATTGCCCAGGCCGCCAATGGAGAACTGATCCTCGCCCCCCATGTAAATGAGGCGGTTGGCCGCATCAAGGCTGTTTCCGCTGGTGCGCTACCTGCTGCAGCGATGACCAGTATCCAg                                   >  4:238346/1‑149 (MQ=255)                                                                                                                ggCCTGGGAAGCGTGGTCAAGTTTGCCGGTATTGCCCAGGCCGCCAATGGAGAACTGATCCTCGCCCCCCATGTAAATGAGGCGGTTGGCCGCATCAAGGCTGTTTCCGCTGGTGCGCTACCTGCTGCAGCGATGACCAGTATCCAGt                                  <  7:214229/148‑1 (MQ=255)                                                                                                                 gCCTGGGAAGCGTGGTCAAGTTTGCCGGTATTGcccaggccaagaggatcgccctcttcataagagtcggtcgccgggttgtaccaacctaggcggtcgtaggttgaaggaccgaagaacacccgcccatccgggacaagtgcggcatt                                <  4:237429‑M2/149‑117 (MQ=255)                                                                                                                               gTCAAGTTTGCCGGTATTGCCCAGGCCGCCAATGGAGAACTGATCCTCGCCCCCCATGTAAATGAGGCGGTTGGCCGCATCAAGGCTGTTTCCGCTGGTGCGCTACCTGCTGCAGCGATGACCAGTATCCAGTGGAACAAGAACTGATc                  >  2:34875/1‑149 (MQ=255)                                                                                                                                tCAAGTTTGCCGGTATTGCCCAGGCCGCCAATGGAGAACTGATCCTCGCCCCCCATGTAAATGAGGCGGTTGGCCGCATCAAGGCTGTTTCCGCTGGTGCGCTACCTGCTGCAGCGATGACCAGTATCCAGTGGAACAAGAACTGATc                  >  1:184204/1‑148 (MQ=255)                                                                                                                                tCAAGTTTGCCGGTATTGCCCAGGCCGCCAATGGAGAACTGATCCTCGCCCCCCATGTAAATGAGGCGGTTGGCCGCATCAAGGCTGTTTCCGCTGGTGCGCTACCTGCTGCAGCGATGACCAGTATCCAGTGGAACAAGAACTGATCg                 >  3:180275/1‑149 (MQ=255)                                                                                                                                   aGTTTGCCGGTATTGCCCAGGCCGCCAATGGAGAACTGATCCTCGCCCCCCATGTAAATGAGGCGGTTGGCCGCATCAAGGCTGTTTCCGCTGGTGCGCTACCTGCTGCAGCGATGACCAGTATCCAGTGGAACAAGAACTGATCGAGc              <  8:26845/149‑1 (MQ=255)                                                                                                                                    gTTTGCCGGTATTGCCCAGGCCGCCAATGGAGAACTGATCCTCGCCCCCCATGTAAATGAGGCGGTTGGCCGCATCAAGGCTGTTTCCGCTGGTGCGCTACCTGCTGCAGCGATGACCAGTATCCAGTGGAACAAGAACTGATCGAGcc             >  5:23164/1‑149 (MQ=255)                                                                                                                                    gTTTGCCGGTATTGCCCAGGCCGCCAATGGAGAACTGATCCTCGCCCCCCATGTAAATGAGGCGGTTGGCCGCATCAAGGCTGTTTCCGCTGGTGCGCTACCTGCTGCAGCGATGACCAGTATCCAGTGGAACAAGAACTGATCGAGc              >  3:179463/1‑148 (MQ=255)                                                                                                                                     tttGCCGGTATTGCCCAGGCCGCCAATGGAGAACTGATCCTCGCCCCCCATGTAAATGAGGCGGTTGGCCGCATCAAGGCTGTTTCCGCTGGTGCGCTACCTGCTGCAGCGATGACCAGTATCCAGTGGAACAAGAACTGATCGAGc              >  7:173933/1‑147 (MQ=255)                                                                                                                                         ccGGTATTGCCCAGGCCGCCAATGGAGAACTGATCCTCGCCCCCCATGTAAATGAGGCGGTTGGCCGCATCAAGGCTGTTTCCGCTGGTGCGCTACCTGCTGCAGCGATGACCAGTATCCAGTGGAACAAGAACTGATCGAGCCAGAc         <  4:180275/148‑1 (MQ=255)                                                                                                                                             tATTGcccaggccaagaggatcgccctcttcataagagtcggtcgccgggttgtaccaacctaggcggtcgtaggttgaaggaccgaagaacacccgcccatccgggacaagtgcggcatttcggaacttggcgccgccggcaggcgct    >  3:237429‑M2/1‑5 (MQ=255)                                                                                                                                               ttGCCCAGGCCGCCAATGGAGAACTGATCCTCGCCCCCCATGTAAATGAGGCGGTTGGCCGCATCAAGGCTGTTTCCGCTGGTGCGCTACCTGCTGCAGCGATGACCAGTATCCAGTGGAACAAGAACTGATCGAGCCAGACCTAcc    >  4:112732/1‑147 (MQ=255)                                                                                                                                               ttGCCCAGGCCGCCAATGGAGAACTGATCCTCGCCCCCCATGTAAATGAGGCGGTTGGCCGCATCAAGGCTGTTTCCGCTGGTGCGCTACCTGCTGCAGCGATGACCAGTATCCAGTGGAACAAGAACTGATCGAGCCAGACCTACCCa  <  3:271206/149‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                   CGAAATGCCGCACTTGTCCCGGATGGGCGGGTGTTCTTCGGTCCTTCAACCTACGACCGCCTAGGTTGGTACAACCCGGCGACCGACTCTTATGAAGAGGGCGATCCTCTTGGCCTGGGAAGCGTGGTCAAGTTTGCCGGTATTGCCCAGGCCGCCAATGGAGAACTGATCCTCGCCCCCCATGTAAATGAGGCGGTTGGCCGCATCAAGGCTGTTTCCGCTGGTGCGCTACCTGCTGCAGCGATGACCAGTATCCAGTGGAACAAGAACTGATCGAGCCAGACCTACCCA  >  NC_002947/1775625‑1775915

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.