| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2024610 = | 38 (0.710) | 3 (0.060) | 3/250 | NT | 7.4% | coding (749/1143 nt) | wbpY | glycosyl transferase WbpY |
| ? | NC_002947 | 2024709 = | 39 (0.770) | coding (848/1143 nt) | wbpY | glycosyl transferase WbpY | |||||
ATGGCCTCGAGCACTGGCAGGCCGAACCCTTCATAGTGCGACGGGAAGGTGAACAGCCGAGCGCCGGCAAACAGCAGCGGCAAGTCTTCACTGGCAACGAAGCCGAGGTAGCGCGCCCAGCCTTCCTGCTGTGCCTGGGCGATACGGCTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2024760‑2024610‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggctgtTCACCTTCCCGTCGCACTATGAAGGGTTCGGCCTGCCAGTGCTCGAGGCCATGAGCTCGGGGGTACCGGTGGTATGTTCCAACAGCTCGTCGTTGCCAGAGGTAGCGGGTTCGGCGGCGTTGATGTGCGCGCCCGATGATGTA > NC_002947/2024709‑2024851 ATGGCCTCGAGCACTGGCAGGCCGAACCCTTCATAGTGCGACGGGAAGGTGAACAGCCGAGCGCCGGCAAACAGCAGCGGCAAGTCTTCACTGGCAACGAAGCCGAGGTAGCGCGCCCAGCCTTCCTGCTGTGCCTGGGCGATACGGCT > 2:268743/1‑149 TGGCCTCGAGCACTGGCAGGCCGAACCCTTCATAGTGCGACGGGAAGGTGAACAGCCGAGCGCCGGCAAACAGCAGCGGCAAGTCTTCACTGGCAACGAAGCCGAGGTAGCGCGCCCAGCCTTCCTGCTGTGCCTGGGCGATACGGCTG > 2:337645/1‑149 GCCTCGAGCACTGGCAGGCCGAACCCTTCATAGTGCGACGGGAAGGTGAACAGCCGAGCGCCGGCAAACAGCAGCGGCAAGTCTTCACTGGCAACGAAGCCGAGGTAGCGCGCCCAGCCTTCCTGCTGTGCCTGGGCGATACGGCTGT < 1:337645/148‑1 GCCTCGAGCACTGGCAGGCCGAACCCTTCATAGTGCGACGGGAAGGTGAACAGCCGAGCGCCGGCAAACAGCAGCGGCAAGTCTTCACTGGCAACGAAGCCGAGGTAGCGCGCCCAGCCTTCCTGCTGTGCCTGGGCGATACGGCTGT < 2:270932/148‑1 TGAACAGCCGAGCGCCGGCAAACAGCAGCGGCAAGTCTTCACTGGCAACGAAGCCGAGGTAGCGCGCCCAGCCTTCCTGCTGTGCCTGGGCGATACGGCTGTTCACCTTCCCGTCGCACTATGAAGGGTTCGGCCTGCCAGTACTCGAG > 5:234063/1‑149 CAGCCGAGCGCCGGCAAACAGCAGCGGCAAGTCTTCACTAGCAACGAAGCCGAGGTAGCGCGCCCAGCCTTCCTGCTGTGCCTGGGCGATACGGCTGTTCACCTTCCCGTCGCACTATGAAGGGTTCGGCCTGCCAGTGCTCGAGGCCA > 4:61734/1‑149 CGGCAAGTCTTCACTGGCAACGAAGCCGAGGTAGCGCGCCCAGCCTTCCTGCTGTGCCTGGGCGATACGGCTGTTCACCTTCCCGTCGCACTATGAAGGGTTCGGCCTGCCAGTACTCGAGGCCATGAGCTCGGGGGTACCGGTGGTAT < 6:234063/149‑1 GGCTGTTCACCTTCCCGTCGCACTATGAAGGGTTCGGCCTGCCAGTGCTCGAGGCCATGAGCTCGGGGGTACCGGTGGTATGTTCCAACAGCTCGTCGTTGCCAGAGGTAGCGGGTTCGGCGGCGTTGATGTGCGCGCCCGATGATGTA < 8:37750/149‑1 ATGGCCTCGAGCACTGGCAGGCCGAACCCTTCATAGTGCGACGGGAAGGTGAACAGCCGAGCGCCGGCAAACAGCAGCGGCAAGTCTTCACTGGCAACGAAGCCGAGGTAGCGCGCCCAGCCTTCCTGCTGTGCCTGGGCGATACGGCTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2024760‑2024610‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggctgtTCACCTTCCCGTCGCACTATGAAGGGTTCGGCCTGCCAGTGCTCGAGGCCATGAGCTCGGGGGTACCGGTGGTATGTTCCAACAGCTCGTCGTTGCCAGAGGTAGCGGGTTCGGCGGCGTTGATGTGCGCGCCCGATGATGTA > NC_002947/2024709‑2024851 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |