New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2358022	50 (0.930)	4 (0.080)	3/254	NT	8.2%	coding (289/825 nt)	PP_2072	AraC family transcriptional regulator
	?	NC_002947	= 2358062	41 (0.790)					coding (249/825 nt)	PP_2072	AraC family transcriptional regulator

AGGGCGTCCTGTTCTTCCAATGGTTCCAGCGCGTGGTCCACTGCCTGTACGAACGCTTCGCTGGCGTGGTACAGACGCGGGTCGCTGGACAGCCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGGATCAGTGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2357874‑2358022 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggCACCGACGCAGGCTTTCGCTACCGCATGGCCTACGTCGACCCGGCACTGATCCAGAACGTGCTGGGTGGTCAGCCTTTGCCCTTCATCGCTGGCGGGCTGTCCAGCGACCCGCGTCTGTACCACGCCAGCGAAGCGTTCGTACA  <  NC_002947/2358062‑2357919                                                                                                                                                                                                                                                                                                       AGGGCGTCCTGTTCTTCCAATGGTTCCAGCGCGTGGTCCACTGCCTGTACGAACGCTTCGCTGGCGTGGTACAGACGCGGGTCGCTGGACAGCCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGGATCAGTGCCGG                                                                                                                                                  <  2:182716/149‑1       TCCTGTTCTTCCAATGGTTCCAGCGCGTGGTCCACTGCCTGTACGAACGCTTCGCTGGCGTGGTACAGACGCGGGTCGCTGGACAGCCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGGATCAGTGCCG                                                                                                                                                   >  7:6404/1‑142       TCCTGTTCTTCCAATGGTTCCAGCGCGTGGTCCACTGCCTGTACGAACGCTTCGCTGGCGTGGTACAGACGCGGGTCGCTGGACAGCCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGGATCAGTGCCG                                                                                                                                                   <  8:6404/142‑1                                       CACTGCCTGTACGAACGCTTCGCTGGCGTGGTACAGACGCGGGTCGCTGGACAGCCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGGATCAGTGCCGGCACCGACGCAGGCTTTCGCTACCGCATGGCCTACGTC                                                                                                             >  3:76981/1‑148                                                TACGAACGCTTCGCTGGCGTGGTACAGACGCGGGTCGCTGGACAGCCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGGATCAGTGCCGGCACCGACGCAGGCTTTCGCTACCGCATGGCCTACGTCGACCCGGCAC                                                                                                   <  4:76981/149‑1                                                                         AGACGCGGGTCGCTGGACAGCCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGGATCAGTGCCGGCACCGACGCAGGCTTTCGCTACCGCATGGCCTACGTCGACCCGGCAC                                                                                                   <  5:303015/124‑1                                                                         AGACGCGGGTCGCTGGACAGCCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGGATCAGTGCCGGCACCGACGCAGGCTTTCGCTACCGCATGGCCTACGTCGACCCGGCAC                                                                                                   >  6:303015/1‑124                                                                                                                                                 GCCGGCACCGACGCAGGCTTTCGCTACCGCATGGCCTACGTCGACCCGGCACTGATCCAGAACGTGCTGGGTGGTCAGCCTTTGCCCTTCATCGCTGGCGGGCTGTCCAGCGACCCGCGTCTGTACCACGCCAGCGAAGCGTTCGTACA  <  1:179555/149‑1                                                                                                                                                                                                                                                                                                       AGGGCGTCCTGTTCTTCCAATGGTTCCAGCGCGTGGTCCACTGCCTGTACGAACGCTTCGCTGGCGTGGTACAGACGCGGGTCGCTGGACAGCCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGGATCAGTGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2357874‑2358022 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggCACCGACGCAGGCTTTCGCTACCGCATGGCCTACGTCGACCCGGCACTGATCCAGAACGTGCTGGGTGGTCAGCCTTTGCCCTTCATCGCTGGCGGGCTGTCCAGCGACCCGCGTCTGTACCACGCCAGCGAAGCGTTCGTACA  <  NC_002947/2358062‑2357919

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.