New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2358022	50 (0.930)	4 (0.080)	3/254	NT	8.2%	coding (289/825 nt)	PP_2072	AraC family transcriptional regulator
	?	NC_002947	= 2358062	41 (0.790)					coding (249/825 nt)	PP_2072	AraC family transcriptional regulator

AGGGCGTCCTGTTCTTCCAATGGTTCCAGCGCGTGGTCCACTGCCTGTACGAACGCTTCGCTGGCGTGGTACAGACGCGGGTCGCTGGACAGCCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATGCCGTCATGCAGTTCGTCCGGGTGCAGCACCAGCGTGTTGCCCGGTATGCCGTGGCGCAGCGAACCCTTGTAATGGAAGCTTTGCACACCGGCCAGCGTA  >  NC_002947/2357874‑2358170                                                                                                                                                      |                                                                                                                                                     aGGGCGTCCTGTTCTTCCAATGGTTCCAGCGCGTGGTCCACTGCCTGTACGAACGCTTCGCTGGCGTGGTACAGACGCGGGTCGCTGGACAGCCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGG‑ATCAGTGCCGG                                                                                                                                                      <  2:182716‑M1/149‑1 (MQ=255)            ttcttcCAATGGGTCCAGCGCGTGGTCCACTGCCTGTACGAACGCTTCGCTGGCGTGGTACAGACGCGGGTCGCTGGACAGCCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAgg                                                                                                                                           <  6:342855/149‑1 (MQ=255)                    aTGGTTCCAGCGCGTGGTCCACTGCCTGTACGAACGCTTCGCTGGCGTGGTACAGACGCGGGTCGCTGGACAGCCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATGCgg                                                                                                                                   >  7:214904/1‑149 (MQ=255)                           caacgcgTGGTCCACTGCCTGTACGAACGCTTCGCTGGCGTGGTACAGACGCGGGTCGCTGGACAGCCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAgg                                                                                                                                           <  3:67318/131‑1 (MQ=255)                           caacgcgTGGTCCACTGCCTGTACGAACGCTTCGCTGGCGTGGTACAGACGCGGGTCGCTGGACAGCCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAgg                                                                                                                                           >  4:67318/4‑134 (MQ=255)                           cAGCGCGTGGTCCACTGCCTGTACGAACGCTTCGCTGGCGTGGTACAGACGCGGGTCGCTGGACAGCCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGa                                                                                                                             <  5:43995/148‑1 (MQ=255)                            aGCGCGTGGTCCACTGCCTGTACGAACGCTTCGCTGGCGTGGTACAGACGCGGGTCGCTGGACAGCCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGa                                                                                                                             >  8:236393/1‑147 (MQ=255)                               gcgTGGTCCACTGCCTGTACGAACGCTTCGCTGGCGTGGTACAGACGCGGGTCGCTGGACAGCCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGcc                                                                                                                        <  4:121876/149‑1 (MQ=255)                                cgTGGTCCACTGCCTGTACGAACGCTTCGCTGGCGTGGTACAGACGCGGGTCGCTGGACAGCCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATg                                                                                                                                      <  7:155520/134‑1 (MQ=255)                                cgTGGTCCACTGCCTGTACGAACGCTTCGCTGGCGTGGTACAGACGCGGGTCGCTGGACAGCCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATg                                                                                                                                      >  8:155520/1‑134 (MQ=255)                                    gTCCACTGCCTGTACGAACGCTTCGCTGGCGTGGTACAGACGCGGGTCGCTGGACAGCCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGt                                                                                                                   <  8:14924/149‑1 (MQ=255)                                      ccACTGCCTGTACGAACGCTTCGCTGGCGTGGTACAGACGCGGGTCGCTGGACAGCCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGGAATCAGTGCCGGGTCGACGTAGGCCATGc                                                                                                                                     <  1:19681/130‑1 (MQ=255)                                      ccACTGCCTGTACGAACGCTTCGCTGGCGTGGTACAGACGCGGGTCGCTGGACAGCCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATGc                                                                                                                                     >  2:19681/1‑129 (MQ=255)                                      ccACTGCCTGTACGAACGCTTCGCTGGCGTGGTACAGACGCGGGTCGCTGGACAGCCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCg                                                                                                                 >  1:299676/1‑149 (MQ=255)                                       cACTGCCTGTACGAACGCTTCGCTGGCGTGGTACAGACGCGGGTCGCTGGACAGCCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGG‑ATCAGTGCCGGcaccgacgcaggctttcgctaccgcatggcctacgtc                                                                                                                 >  3:76981‑M1/1‑111 (MQ=255)                                              tGTACGAACGCTTCGCTGGCGTGGTACAGACGCGGGTCGCTGGACAGCCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGccggc                                                                                                         <  1:179555‑M2/149‑6 (MQ=255)                                                tACGAACGCTTCGCTGGCGTGGTACAGACGCGGGTCGCTGGACAGCCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGG‑ATCAGTGCCGGcaccgacgcaggctttcgctaccgcatggcctacgtcgacccggcac                                                                                                       <  4:76981‑M1/149‑48 (MQ=255)                                                tACGAACGCTTCGCTGGCGTGGTACAGACGCGGGTCGCTGGACAGCCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCa                                                                                                       >  2:59168/1‑149 (MQ=255)                                                  cGAACGCTTCGCTGGTGTGGTACAGACGCGGGTCGCTGGACAGCCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATg                                                                                                     >  2:146379/1‑149 (MQ=255)                                                   gAACGCTTCGCTGGCGTGGTACAGACGCGGGTCGCTGGACAGCCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATGc                                                                                                    >  8:8815/1‑149 (MQ=255)                                                         ttCGCTGGCGTGGTACAGACGCGGGTCGCTGGACAGCCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAgg                                                                                                                                           >  4:184105/1‑104 (MQ=255)                                                         ttCGCTGGCGTGGTACAGACGCGGGTCGCTGGACAGCCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAgg                                                                                                                                           <  3:184105/104‑1 (MQ=255)                                                         ttCGCTGGCGTGGTACAGACGCGGGTCGCTGGACAGCCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATGCCGTCAt                                                                                              >  1:200842/1‑149 (MQ=255)                                                                     gTACAGACGCGGGTCGCTGGACAGCCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATGCCGTCATGCAGTTCGTCCg                                                                                  >  8:169197/1‑149 (MQ=255)                                                                         aGACGCGGGTCGCTGGACAGCCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGG‑ATCAGTGCCGGcaccgacgcaggctttcgctaccgcatggcctacgtcgacccggcac                                                                                                       >  6:303015‑M1/1‑77 (MQ=255)                                                                         aGACGCGGGTCGCTGGACAGCCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGG‑ATCAGTGCCGGcaccgacgcaggctttcgctaccgcatggcctacgtcgacccggcac                                                                                                       <  5:303015‑M1/124‑48 (MQ=255)                                                                           aCGCGGGTCGCTGGACAGCCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATGCCGTCATGCAGTTCGTCCGGGTg                                                                              >  7:79815/1‑147 (MQ=255)                                                                             gcgGGTCGCTGGACAGCCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATGCCGTCATGCAGTTCGTCCGGGTgcag                                                                           >  7:151498/1‑148 (MQ=255)                                                                               gggTCGCTGGACAGGCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATGCCGTCATGCAGTTCGTCCGGGTGCAGCAc                                                                        >  1:127343/1‑149 (MQ=255)                                                                                     cTGGACAGCCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATGCCGTCATGCAGTTCGTCCGGGTGCAGCACCAGCgt                                                                  >  2:119797/1‑149 (MQ=255)                                                                                        gACAGCCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATGCCGTCATGCAGTTCGTCCGGGTGCAGCACCAGCGTGtt                                                               <  1:146379/149‑1 (MQ=255)                                                                                             cccGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATGCCGTCATGCAGTTCGTCCGGGTGCAGCACCAGCGTGTTGCCCg                                                          <  8:214904/149‑1 (MQ=255)                                                                                                        tGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATGCCGTCATGCAGTTCGTCCGGGTGCAGCACCAGCGTGTTGCCCGGTATGCCGTgg                                               >  3:249724/1‑149 (MQ=255)                                                                                                         gAAGGGCAAAGGCTGACCACCCAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATGCCGTCATGCAGTTCGTCCGGGTGCAGCACCAGCGTGTTGCCCGGTATGCCGTGgc                                              >  3:246299/1‑149 (MQ=255)                                                                                                            gggCAAAGGCTGACCACCCAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATGCCGTCATGCAGTTCGTCCGGGTGCAGCACCAGCGTGTTGCCCGGTATGCCGTGgcg                                             >  2:78190/1‑147 (MQ=255)                                                                                                             ggCAAAGGCTGACCACCCAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATGCCGTCATGCAGTTCGTCCGGGTGCAGCACCAGCGTGTTGCCCGGTATGCCGTGGCGCAg                                          >  2:257008/1‑149 (MQ=255)                                                                                                              gCAAAGGCTGACCACCCAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATGCCGTCATGCAGTTCGTCCGGGTGCAGCACCAGCGTGTTGCCCGGTATGCCGTGGCGCAGc                                         <  2:200842/149‑1 (MQ=255)                                                                                                                aaaGGCTGACCACCCAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATGCCGTCATGCAGTTCGTCCGGGTGCAGCACCAGCGTGTTGCCCGGTATGCCGTGGCGCAGCg                                        >  1:58090/1‑148 (MQ=255)                                                                                                                     cTGACCACCCAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATGCCGTCATGCAGTTCGTCCGGGGGCAGCACCAGCGTGTTGCCCGGTATGCCGTGGCGCAGCGAACCCt                                  <  7:236393/149‑1 (MQ=255)                                                                                                                      tGACCACCCAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATGCCGTCATGCAGTTCGTCCGGGTGCAGCACCAGCGTGTTGCCCGGTATGCCGAGGCGCAGCGAACCCtt                                 >  1:168778/1‑149 (MQ=255)                                                                                                                      tGACCACCCAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTACGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATGCCGTCATGCAGTTCGTCCGGGTGCAGCACCAGCGTGTTGCCCGGTATGCCCTGACGCAGCGAACCCtt                                 >  3:126340/1‑149 (MQ=255)                                                                                                                        accaccCAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATGCCGTCATGCAGTTCGTCCGGGTGCAGCACCAGCGTGTTGCCCGGTATGCCGTGGCGCAGCGAACCCtt                                 <  8:79815/147‑1 (MQ=255)                                                                                                                        accaccCAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATGCCGTCATGCAGTTCGTCCGGGTGCAGCACCAGCGTGTTGCCCGGTATGCCGTGGCGCAGCGAACCCTTg                                <  2:58090/148‑1 (MQ=255)                                                                                                                          caccCAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATGCCGTCATGCAGTTCGTCCGGGTGCAGCACCAGCGTGTTGCCCGGTATGCCGTGGCGCAGCGAACCCTTGTaa                             <  3:254988/149‑1 (MQ=255)                                                                                                                            cccAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATGCCGTCATGCAGTTCGTCCGGGTGCAGCACCAGCGTGTTGCCCGGTATGCCGTGGCGCAGCGAACCCTTGTAATg                           >  3:70911/1‑149 (MQ=255)                                                                                                                             ccAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATGCCGTCATGCAGTTCGTCCGGGTGCAGCACCAGCGTGTTGCCCGGTATGCCGTGGCGCAGCGAACCCTTGTAATgg                          <  8:175961/149‑1 (MQ=255)                                                                                                                             ccAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATGCCGTCATGCAGTTCGTCCGGGTGCAGCACCAGCGTGTTGCCCGGTATGCCGTGGCGCAGCGAACCCTTGTAATg                           >  4:117996/1‑148 (MQ=255)                                                                                                                              cAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCa                                                                                                       <  6:19149/71‑1 (MQ=255)                                                                                                                              cAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCa                                                                                                       >  5:19149/1‑71 (MQ=255)                                                                                                                               aGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATGCCGTCATGCAGTTCGTCCGGGTGCAGCACCAGCGTGTTGCCCGGTATGCCGTGGCGCAGCGAACCCTTGTAATGGaa                        <  1:78190/149‑1 (MQ=255)                                                                                                                                 cACGTTCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATGCCGTCATGCAGTTCGTCCGGGTGCAGCACCAGCGTGTTGCCCGGTATGCCGTGGCGCAGCGAACCCTTGTAATGGAAGc                      <  1:59168/149‑1 (MQ=255)                                                                                                                                     ttCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATGCCGTCATGCAGTTCGTCCGGGTGCAGCACCAGCGTGTTGCCCGGTATGCCGTGGCGCAGCGAACCCTTGTAATGGAAGCTTTg                  <  4:246299/149‑1 (MQ=255)                                                                                                                                       cTGG‑ATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATGCCGTCATGCAGTTCGTCCGGGTGCAGCACCAGCGTGTTGCCCGGTATGCCGTGGCGCAGCGAACCCTTGTAATGGAAGCTTTGc                 <  2:179555/148‑1 (MQ=255)                                                                                                                                          g‑ATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATGCCGTCATGCAGTTCGTCCGGGTGCAGCACCAGCGTGTTGCCCGGTATGCCGTGGCGCAGCGAACCCTTGTAATGGAAGCTTTGCacac             >  8:155502/1‑149 (MQ=255)                                                                                                                                             tCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATGCCGTCATGCAGTTCGTCCGGGTGCAGCACCAGCGTGTTGCCCGGTATGCCGTGGCGCAGCGAACCCTTGTAATGGAAGCTTTGCACACCg           >  7:163178/1‑149 (MQ=255)                                                                                                                                                gTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGccggcactgatccagaacgtgctgggtggtcagcctttgcccttcatcgctggcgggctgtccagcgacccgcgtctgtaccacgccagcgaagcgttcgta        <  4:76981‑M2/149‑103 (MQ=255)                                                                                                                                                gTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGccggcactgatccagaacgtgctgggtggtcagcctttgcccttcatcgctggcgggctgtccagcgacccgcgtct                                 >  6:303015‑M2/1‑47 (MQ=255)                                                                                                                                                gTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGccggcactgatccagaacgtgctgggtggtcagcctttgcccttcatcgctggcgggctgtccagcgacccgcgtct                                 <  5:303015‑M2/124‑78 (MQ=255)                                                                                                                                                 tGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATGCCGTCATGCAGTTCGTCCGGGTGCAGCACCAGCGTGTTGCCCGGTATGCCGTGGCGCAGCGAACCCTTGTAATGGAAGCTTTGCACACCGGCCa       <  1:119797/149‑1 (MQ=255)                                                                                                                                                  gCCGGcaccgacgcaggctttcgctaccgcatggcctacgtcgacccggcactgatccagaacgtgctgggtggtcagcctttgcccttcatcgctggcgggctgtccagcgacccgcgtctgtaccacgccagcgaagcgttcgtaca      <  1:179555‑M1/149‑145 (MQ=255)                                                                                                                                                   ccGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATGCCGTCATGCAGTTCGTCCGGGTGCAGCACCAGCGTGTTGCCCGGTATGCCGTGGCGCAGCGAACCCTTGTAATGGAAGCTTTGCACACCGGCCAGc     <  2:127343/149‑1 (MQ=255)                                                                                                                                                   ccGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATGCCGTCATGCAGTTCGTCCGGGTGCAGCACCAGCGTGTTGCCCGGTATGCCGTGGCGCAGCGAACCCTTGTAATGGAAGCTTTGCACACCGGCCAGc     <  2:299676/149‑1 (MQ=255)                                                                                                                                                     gggTCGACGTAGGTCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATGCCGTCATGCAGTTCGTCCGGGTGCAGCACCAGCGTGTTGCCCGGTATGc                                                    <  1:35338/100‑1 (MQ=255)                                                                                                                                                     gggTCGACGTAGGTCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATGCCGTCATGCAGTTCGTCCGGGTGCAGCACCAGCGTGTTGCCCGGTATGc                                                    >  2:35338/1‑100 (MQ=255)                                                                                                                                                      ggTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATGCCGTCATGCAGTTCGTCCGGGTGCAGCACCAGCGTGTTGCCCGGTATGCCGTGGCGCAGCGAACCCTTGTAATGGAAGCTTTGCACACCGGCCAGCGTa  <  4:249724/149‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                     AGGGCGTCCTGTTCTTCCAATGGTTCCAGCGCGTGGTCCACTGCCTGTACGAACGCTTCGCTGGCGTGGTACAGACGCGGGTCGCTGGACAGCCCGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGG‑ATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATGCCGTCATGCAGTTCGTCCGGGTGCAGCACCAGCGTGTTGCCCGGTATGCCGTGGCGCAGCGAACCCTTGTAATGGAAGCTTTGCACACCGGCCAGCGTA  >  NC_002947/2357874‑2358170

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.