| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2686506 | 54 (1.000) | 4 (0.080) | 4/256 | NT | 6.6% | coding (1216/2388 nt) | PP_2354 | two‑component system sensor histidine kinase/response regulator |
| ? | NC_002947 | = 2686544 | 60 (1.150) | coding (1178/2388 nt) | PP_2354 | two‑component system sensor histidine kinase/response regulator | |||||
GCGCTCCAGAAAGCTGGCACCGGTGAGTATCACCGTCAGCAGGTTATTGAAGTCATGCGCCACGCCAGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2686357‑2686506‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgAAGCCGCCCTGAGCCTGGCAGACGCCAACGCGCGGCTGCGCGAACAGATCAACGAGCGCGAGCGCATCGAGGCCGCTCTGCAGCAGATGCAGCGGCTGGAAGCGGTTGGGCAACTAACGGCTGGCGTGGCGCATGACTTCAATAACCT < NC_002947/2686544‑2686397 GCGCTCCAGAAAGCTGGCACCGGTGAGTATCACCGTCAGCAGGTTATTGAAGTCATGCGCCACGCCAGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGC < 2:290514/149‑1 CGCTCCAGAAAGCTGGCACCGGTGAGTATCACCGTCAGCAGGTTATTGAAGTCATGCGCCACGCCAGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCG > 8:1509/1‑149 GCTCCAGAAAGCTGGCACCGGTGAGTATCACCGTCAGCAGGTTATTGAAGTCATGCGCCACGCCAGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCG > 7:12746/1‑148 CCGTCAGCAGGTTATTGAAGTCATGCGCCACGCCAGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGAAGCCGCCCTGAGCCTGGCAGACGCCAACGC > 1:335460/1‑149 GCAGGTTATTGAAGTCATGCGCCACGCCAGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGAAGCCGCCCTGAGCCTGGCAGACGCCAACGCGCGGCT > 3:30620/1‑149 TTGAAGTCATGCGCCACGCCAGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGAAGCCGCCCTGAGCCTGGCAGACGCCAACGCGCGGCTGCGCGAAC < 2:335460/149‑1 TTGAAGTCATGCGCCACGCCAGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGAAGCCGCCCTGAGCCTGGCAGACGCCAACGCGCGGCTGCGCGAA < 4:30620/148‑1 GCGAAGCCGCCCTGAGCCTGGCAGACGCCAACGCGCGGCTGCGCGAACAGATCAACGAGCGCGAGCGCATCGAGGCCGCTCTGCAGCAGATGCAGCGGCTGGAAGCGGTTGGGCAACTAACGGCTGGCGTGGCGCATGACTTCAATAAC < 2:96959/149‑1 GCGAAGCCGCCCTGAGCCTGGCAGACGCCAACGCGCGGCTGCGCGAACAGATCAACGAGCGCGAGCGCATCGAGGCCGCTCTGCAGCAGATGCAGCGGCTGGAAGCGGTTGGGCAACTAACGGCTGGCGTGGC > 1:303267/1‑133 GCGAAGCCGCCCTGAGCCTGGCAGACGCCAACGCGCGGCTGCGCGAACAGATCAACGAGCGCGAGCGCATCGAGGCCGCTCTGCAGCAGATGCAGCGGCTGGAAGCGGTTGGGCAACTAACGGCTGGCGTGGC < 2:303267/133‑1 GAAGCCGCCCTGAGCCTGGCAGACGCCAACGCGCGGCTGCGCGAACAGATCAACGAGCGCGAGCGCATCGAGGCCGCTCTGCAGCAGATGCAGCGGCTGGAAGCGGTTGGGCAACTAACGGCTGGCGTGGCGCATGACTTCAATAACCT > 8:177829/1‑149 GCGCTCCAGAAAGCTGGCACCGGTGAGTATCACCGTCAGCAGGTTATTGAAGTCATGCGCCACGCCAGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2686357‑2686506‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgAAGCCGCCCTGAGCCTGGCAGACGCCAACGCGCGGCTGCGCGAACAGATCAACGAGCGCGAGCGCATCGAGGCCGCTCTGCAGCAGATGCAGCGGCTGGAAGCGGTTGGGCAACTAACGGCTGGCGTGGCGCATGACTTCAATAACCT < NC_002947/2686544‑2686397 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |