New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2686506	54 (1.000)	4 (0.080)	4/256	NT	6.6%	coding (1216/2388 nt)	PP_2354	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	= 2686544	60 (1.150)					coding (1178/2388 nt)	PP_2354	two‑component system sensor histidine kinase/response regulator

CGCTCCAGAAAGCTGGCACCGGTGAGTATCACCGTCAGCAGGTTATTGAAGTCATGCGCCACGCCAGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTCGCGTGCCACCACGTACAGCAAGGTGTCCTCCGGCACCACCACCCACGACAGCCAGCGCTGTTGGCCGCCGGCATGCAGGATGCGGCCGAC  >  NC_002947/2686358‑2686653                                                                                                                                                     |                                                                                                                                                     cgcTCCAGAAAGCTGGCACCGGTGAGTATCACCGTCAGCAGGTTATTGAAGTCATGCGCCACGCCAGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCG                                                                                                                                                      >  8:1509‑M1/1‑149 (MQ=255)  gcTCCAGAAAGCTGGCACCGGTGAGTATCACCGTCAGCAGGTTATTGAAGTCATGCGCCACGCCAGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCG                                                                                                                                                      >  7:12746‑M1/1‑148 (MQ=255)    tCCAGAAAGCTGGCACCGGTGAGTATCACCGTCAGCAGGTTATTGAAGTCATGCGCCACGCCAGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAg                                                                                                                                                   >  7:123117/1‑149 (MQ=255)     ccAGAAAGCTGGCACCGGTGAGTATCACCGTCAGCAGGTTATTGAAGTCATGCGCCACGCCAGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGc                                                                                                                                                  >  7:177829/1‑149 (MQ=255)         aaaGCTGGCACCGGTGAGTATCACCGTCAGCAGGTTATTGAAGTCATGCGACACGCCAGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTTCCGAGCGGCGTCGATGCGCTCGCGCTCGGTGAGCTGTTCGAGCAgcggcg                                                                                                                                              >  4:197772/1‑149 (MQ=255)                gCACCGGTGAGTATCACCGTCAGCAGGTTATTGAAGTCATGCGCCACGCCAGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTg                                                                                                                                         <  8:12746/147‑1 (MQ=255)                gCACCGGTGAGTATCACCGTCAGCAGGTTATTGAAGTCATGCGCCACGCCAGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTg                                                                                                                                         <  6:171626/147‑1 (MQ=255)                  aCCGGTGAGTATCACCGTCAGCAGGTTATTGAAGTCATGCGCCACGCCAGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGt                                                                                                                                     <  4:188326/149‑1 (MQ=255)                         aGTATCACCGTCAGCAGGTTATTGAAGTCATGCGCCACGCCAGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCa                                                                                                                              <  5:186180/148‑1 (MQ=255)                               aCCGTCAGCAGGTTATTGAAGTCATGCGCCACGCCAGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGt                                                                                                                                     >  6:124351/1‑136 (MQ=255)                               aCCGTCAGCAGGTTATTGAAGTCATGCGCCACGCCAGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGt                                                                                                                                     <  5:124351/136‑1 (MQ=255)                                ccGTCAGCAGGTTATTGAAGTCATGCGCCACGCCAGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGaagccgccctgagcctggcagacgccaacgc                                                                                                                       >  1:335460‑M1/1‑118 (MQ=255)                                     agcagGTTATTGAAGTCATGCGCCACGCCAGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGggcggc                                                                                                                 <  4:113529/149‑1 (MQ=255)                                      gcagGTTATTGAAGTCATGCGCCACGCCAGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGaagccgccctgagcctggcagacgccaacgcgcggct                                                                                                                 >  3:30620‑M1/1‑112 (MQ=255)                                        aGGTTATTGAAGTCATGCGCCACGCCAGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTc                                                                                                              >  8:177829‑M2/1‑148 (MQ=255)                                          gTTATTGAAGTCATGCGCCACGCCAGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTcgc                                                                                                            <  2:96959‑M2/149‑4 (MQ=255)                                             aTTGAAGTCCTGCGCCACGCCAGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCgcgc                                                                                                          <  7:146121/148‑1 (MQ=255)                                              ttGAAGTCATGCGCCACGCCAGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGaagccgccctgagcctggcagacgccaacgcgcggctgcgcgaac                                                                                                         <  2:335460‑M1/149‑46 (MQ=255)                                              ttGAAGTCATGCGCCACGCCAGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGaagccgccctgagcctggcagacgccaacgcgcggctgcgcgaa                                                                                                          <  4:30620‑M1/148‑45 (MQ=255)                                               tGAAGTCATGCGCCACGCCAGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGcgctcg                                                                                                       >  7:125260/1‑149 (MQ=255)                                                gAAGTCATGCGCCACGCCAGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGcgctcg                                                                                                       <  1:96959/148‑1 (MQ=255)                                                 aaGTCATGCGCCACGCCAGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGcgctcgct                                                                                                     >  1:58489/1‑149 (MQ=255)                                                  aGTCATGCGCCACGCCAGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGTGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTg                                                                                                    <  4:240832/149‑1 (MQ=255)                                                       tGCGCCACGCCAGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGAt                                                                                               >  2:278119/1‑149 (MQ=255)                                                        gcgcCACGCCAGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTAGATGAGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCACGGCGGCTTCGCGCTCGCTGGTGATg                                                                                              >  7:49464/1‑149 (MQ=255)                                                         cgccacgccaGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGt                                                                                             <  2:173925/149‑1 (MQ=255)                                                          gccacgccaGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTcgc                                                                                                            <  2:303267‑M2/133‑4 (MQ=255)                                                          gccacgccaGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTcgc                                                                                                            >  1:303267‑M2/1‑130 (MQ=255)                                                            cacgccaGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTcgc                                                                                          >  8:142407/1‑149 (MQ=255)                                                             acgccaGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTcgcg                                                                                         >  5:304650/1‑149 (MQ=255)                                                               gccaGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTCGCGTg                                                                                       <  4:208055/149‑1 (MQ=255)                                                                     cGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTCGCGTGccacca                                                                                 >  5:19652/1‑149 (MQ=255)                                                                          gTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTCGCGTGCCACCACGTa                                                                             <  1:278119/148‑1 (MQ=255)                                                                          gTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTCGCGTGCCACCACGTAc                                                                            <  2:58489/149‑1 (MQ=255)                                                                           ttGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTCGCGTGCCACCACGTACa                                                                           <  7:142407/149‑1 (MQ=255)                                                                              cccAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTCGCGTGCCACCACGTACAGc                                                                         >  1:72108/1‑148 (MQ=255)                                                                               ccAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTT‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTCGCGTGCCACCACGTACAGc                                                                         >  7:237005/1‑147 (MQ=255)                                                                               ccAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTCGCGTGCCCCCACGTACAGc                                                                         >  8:304265/1‑147 (MQ=255)                                                                               ccAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTCGCGTGCCACCACGTACAGc                                                                         >  7:72476/1‑147 (MQ=255)                                                                                 aaCCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTCGCGTGCCACCACGTACAGCAAgg                                                                     <  8:123117/149‑1 (MQ=255)                                                                                  aCCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGACTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGTTTCGCGCTCGCTGGTGATGTCGCGTGCCACCACGTACAGCAAGgt                                                                    <  8:49464/149‑1 (MQ=255)                                                                                   ccGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTCGCGTGCCACCACGTACAGCAAGgtg                                                                   >  5:295024/1‑149 (MQ=255)                                                                                    cGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTcgc                                                                                          >  2:144685/1‑125 (MQ=255)                                                                                    cGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTCGCGTGCCACCACGTACAGCAAGgtgt                                                                  <  8:125260/149‑1 (MQ=255)                                                                                      cTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTCGCGTGCCACCACGTACAGCAAGGTGtcc                                                                <  7:1509/149‑1 (MQ=255)                                                                                        tCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTCGCGTGCCACCACGTACAGCAAGGTGtcctc                                                              >  6:124354/1‑149 (MQ=255)                                                                                         ccAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTCGCGTGCCACCACGTACAGCAAGGTGtcctc                                                              <  8:72476/148‑1 (MQ=255)                                                                                           aGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTCGCGTGCCCCCACGTACAGCAAGGTGTCCTCCgg                                                           >  5:252877/1‑149 (MQ=255)                                                                                               gCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTCGCGTGCCACCACGTACAGCAAGGTGTCCTCCGGcac                                                        >  4:328077/1‑148 (MQ=255)                                                                                                       tgctgcAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTCGCGTGCCACCACGTACAGCAAGGTGTCCTCCGGCACCAccaccca                                               >  4:165598/1‑149 (MQ=255)                                                                                                       tgctgcAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTCGCGTGCCACCACGTACAGCAAGGTGTCCTCCGGCACCAccaccca                                               >  4:295000/1‑149 (MQ=255)                                                                                                              gagCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTCGCGTGCCACCACGTACAGCAAGGTGTCCTCCGGCACCACCACCCACGAcagc                                        <  6:252877/149‑1 (MQ=255)                                                                                                                gCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTCGCGTGCCACCACGTACAGCAAGGTGTCCTCCGGCACCACCACCCACGAcagcca                                      <  6:304650/149‑1 (MQ=255)                                                                                                                     cTCGATGCGCTCGCGCTCGATGATCTCTTCGCGCAGCCGCGCGTTGGCGTCATGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTCGCGTGCCACCACCTACAGCAAGGTGTCCTCCGGCACCACCACCCACGACAGCCAgcgc                                  >  1:84699/1‑149 (MQ=255)                                                                                                                      tCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTCGCGTGCCACCACGTACAGCAAGGTGTCCTCCGGCACCACCACCCACGACAGCCAGCGCTg                                >  7:88753/1‑149 (MQ=255)                                                                                                                        gATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTCGCGTGCCACCACGTACAGCAAGGTGTCCTCCGGCACCACCACCCACGACAGCCAGCGCTGtt                              <  8:88753/149‑1 (MQ=255)                                                                                                                        gATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTCGCGTGCCACCACGTACAGCAAGGTGTCCTCCGGCACCACCACCCACGACAGCCAGCGCTGtt                              >  3:299428/1‑149 (MQ=255)                                                                                                                         aTGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTCGCGTGCCACCACGTACAGCAAGGTGTCCTCCGGCACCACCACCCACGACAGCCAGCGCTGTTg                             <  6:295024/149‑1 (MQ=255)                                                                                                                               tcgcgctcgTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTCGCGTGCCACCACGTACAGCAAGGTGTCCTCCGGCACCACCACCCACGACAGCCAGCGCTGt                               >  7:204402/1‑141 (MQ=255)                                                                                                                               tcgcgctcgTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTCGCGTGCCACCACGTACAGCAAGGTGTCCTCCGGCACCACCACCCACGACAGCCAGCGCTGt                               <  8:204402/141‑1 (MQ=255)                                                                                                                                   gctcgTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTCGCGTGCCACCACGTACAGCAAGGTGTCCTCCGGCACCACCACCCACGACAGCCAGCGCTGTTGGCCGCCGGCa                   >  5:131708/1‑149 (MQ=255)                                                                                                                                       gTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTCGCGTGCCACCACGTACAGCAAGGTGTCCTCCGGCACCACCACCCACGACAGCCAGCGCTGTTGGCCGCCGGCATg                 <  6:19652/147‑1 (MQ=255)                                                                                                                                       gTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTCGCGTGCCACCACGTACAGCAAGGTGTCCTCCGGCACCACCACCCACGACAGCCAGCGCTGTTGGCCGCCGGCATg                 >  8:205716/1‑147 (MQ=255)                                                                                                                                       gTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTCGCGTGCCACCACGTACAGCAAGGTGTCCTCCGGCACCACCACCCACGACAGCCAGCGCTGTTGGCCGCCGGCATGCa               <  3:165598/149‑1 (MQ=255)                                                                                                                                             gccaacgcgcgGCTGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTCGCGTGCCACCACGTACAGCAAGGTGTCCTCCGGCACCACCACCCACGACAGCCAGCGCTGtt                              <  7:185741/123‑1 (MQ=255)                                                                                                                                             gccaacgcgcgGCTGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTCGCGTGCCACCACGTACAGCAAGGTGTCCTCCGGCACCACCACCCACGACAGCCAGCGCTGtt                              >  8:185741/6‑128 (MQ=255)                                                                                                                                               gTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTcgcgaacagatcaacgagcgcgagcgcatcgaggccgctctgcagcagatgcagcggctggaagcggttgggcaactaacggctggcgtggcgcatgacttcaa       <  2:335460‑M2/149‑105 (MQ=255)                                                                                                                                                ttCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTcgcgaacagatcaacgagcgcgagcgcatcgaggccgctctgcagcagatgcagcggctggaagcggttgggcaactaacggctggcgtggcgcatgacttcaa       <  4:30620‑M2/148‑105 (MQ=255)                                                                                                                                                ttCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTCGCGTGCCACCACGTACAGCAAGGTGTCCTCCGGCACCACCACCCACGACAGCCAGCGCTGTTGgcc                          <  4:314072/129‑1 (MQ=255)                                                                                                                                                ttCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTCGCGTGCCACCACGTACAGCAAGGTGTCCTCCGGCACCACCACCCACGACAGCCAGCGCTGTTGGCCGCCGGCATGCAGGATGCGGc      <  5:124354/149‑1 (MQ=255)                                                                                                                                                   gcgcAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTCGCGTGCCACCACGTACAGCAAGGTGTCCTCCGGCACCACCACCCACGACAGCCAGCGCTGTTGGCCGCCGGCATGCAGGATGCGGc      <  6:319008/146‑1 (MQ=255)                                                                                                                                                   gcgcAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTCGCGTGCCACCACGTACAGCAAGGTGTCCTCCGGCACCACCACCCACGACAGCCAGCGCTGTTGGCCGCCGGCATGCAGGATGCGGc      >  5:319008/1‑146 (MQ=255)                                                                                                                                                   gcgaagccgccctgagcctggcagacgccaacgcgcggctgcgcgaacagatcaacgagcgcgagcgcatcgaggccgctctgcagcagatgcagcggctggaagcggttgggcaactaacggctggcgtggcgcatgacttcaataac    <  2:96959‑M1/149‑147 (MQ=255)                                                                                                                                                   gcgaagccgccctgagcctggcagacgccaacgcgcggctgcgcgaacagatcaacgagcgcgagcgcatcgaggccgctctgcagcagatgcagcggctggaagcggttgggcaactaacggctggcgtggc                    <  2:303267‑M1/133‑131 (MQ=255)                                                                                                                                                   gcgaagccgccctgagcctggcagacgccaacgcgcggctgcgcgaacagatcaacgagcgcgagcgcatcgaggccgctctgcagcagatgcagcggctggaagcggttgggcaactaacggctggcgtggc                    >  1:303267‑M1/1‑3 (MQ=255)                                                                                                                                                    cgcAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTCGCGTGCCACCACGTACAGCAAGGTGTCCTCCGGCACCACCACCCACGACAGCCAGCGCTGTTGGCCGCCGGCATGCAGGATGCGGCCGa   >  6:193961/1‑148 (MQ=255)                                                                                                                                                     gaagccgccctgagcctggcagacgccaacgcgcggctgcgcgaacagatcaacgagcgcgagcgcatcgaggccgctctgcagcagatgcagcggctggaagcggttgggcaactaacggctggcgtggcgcatgacttcaataacct  >  8:177829‑M1/1‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     CGCTCCAGAAAGCTGGCACCGGTGAGTATCACCGTCAGCAGGTTATTGAAGTCATGCGCCACGCCAGCCGTTAGTTGCCCAACCGCTTCCAGCCGCTGCATCTGCTGCAGAGCGGCCTCGATGCGCTCGCGCTCGTTGATCTGTTCGCGCAGCCGCGCGTTGGCGTC‑TGCCAGGCTCAGGGCGGCTTCGCGCTCGCTGGTGATGTCGCGTGCCACCACGTACAGCAAGGTGTCCTCCGGCACCACCACCCACGACAGCCAGCGCTGTTGGCCGCCGGCATGCAGGATGCGGCCGAC  >  NC_002947/2686358‑2686653

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.