New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2746917 =	60 (1.110)	3 (0.060)	3/254	NT	5.4%	coding (852/1287 nt)	PP_2402	sensor histidine kinase
	?	NC_002947	2746963 =	47 (0.910)					coding (806/1287 nt)	PP_2402	sensor histidine kinase

CACGACCTGCAAACCCCGATCACTCGCATGAAGTTGCGGGTCGAAGTGATGGATGAGGGGGTCGAAAGGGACAAGTTCGGGAGCGACCTGGATGAAATGGAACACCTGGTGCGCGAAGGCGTGGCGTATGCCCGCAGCATGGACAGCAGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2747069‑2746917 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaccAGGTGTTCCATTTCATCCAGGTCGCTCCCGAACTTGTCCCTTTCGACCCCCTCATCCATCACTTCGACCCGCAACTTCATGCGAGTGATCGGGGTTTGCAGGTCGTGGGAAATGGCCGCCAGCAACTGCATGCGTTCCTTGAGG  >  NC_002947/2746963‑2747106                                                                                                                                                                                                                                                                                                           CACGACCTGCAAACCCCGATCACTCGCATGAAGTTGCGGGTCGAAGTGATGGATGAGGGGGTCGAAAGGGACAAGTTCGGGAGCGACCTGGATGAAATGGAACACCTGGTGCGCGAAGGCGTGGCGTATGCCCGCAGCATGGACAGCAG                                                                                                                                                      >  4:295618/1‑149    GACCTGCAAACCCCGATCACTCGCATGAAGTTGCGGGTCGAAGTGATGGATGAGGGGGTCGAAAGGGACAAGTTCGGGAGCGACCTGGATGAAATGGAACACCTGGTGCGCGAAGGCGTGGCGTATGCCCGCAGCATGGACAGCAGCAC                                                                                                                                                   >  4:270334/1‑149                                                                                                       CACCTGGTGCGCGAAGGCGTGGCGTATGCCCGCAGCATGGACAGCAGCACCAGGTGTTCCATTTCATCCAGGTCGCTCCCGAACTTGTCCCTTTCGACCCCCCCATCCATCACTTCGACCCGCAACTTCATGCGAGTGATCGGGGTTTG                                                >  3:95349/1‑149                                                                                                            GGTGCGCGAAGGCGTGGCGTATGCCCGCAGCATGGACAGCAGCACCAGGTGGTCCATTTCATCCAGGTCGCTCCCGAACTTGTCCCTTTCGACCCCCTCATCCATCACTTCGAC                                                                              >  6:204283/1‑114                                                                                                            GGTGCGCGAAGGCGTGGCGTATGCCCGCAGCATGGACAGCAGCACCAGGTGCTCCATTTCATCCAGGTCGCTCCCGAACTTGTCCCTTTCGACCCCCTCATCCATCACTTCGAC                                                                              <  5:204283/114‑1                                                                                                                                                     GCACCAGGGGCTCCATTTCATCCAGGACTCTCCCGAACTTGTCCCATTCGACCCCCTCATCCATCACATCGACCCGCAACTTCATGCGAGTGATCGGGGTTTGCAGGTCGTGGGAAATGGCCGCCAGCAACTGCATGCGTTCCTTGAGG  <  4:249741/149‑1                                                                                                                                                                                                                                                                                                           CACGACCTGCAAACCCCGATCACTCGCATGAAGTTGCGGGTCGAAGTGATGGATGAGGGGGTCGAAAGGGACAAGTTCGGGAGCGACCTGGATGAAATGGAACACCTGGTGCGCGAAGGCGTGGCGTATGCCCGCAGCATGGACAGCAGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2747069‑2746917 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaccAGGTGTTCCATTTCATCCAGGTCGCTCCCGAACTTGTCCCTTTCGACCCCCTCATCCATCACTTCGACCCGCAACTTCATGCGAGTGATCGGGGTTTGCAGGTCGTGGGAAATGGCCGCCAGCAACTGCATGCGTTCCTTGAGG  >  NC_002947/2746963‑2747106

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.