New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2746917 =60 (1.110)3 (0.060) 3/254 NT 5.4% coding (852/1287 nt) PP_2402 sensor histidine kinase
?NC_002947 2746963 = 47 (0.910)coding (806/1287 nt) PP_2402 sensor histidine kinase

CACCAGTACCCGGCGCAGCGCATGCGGGCGGGTTTCCAGCAGGGTATCGCTGCTGCCGTGGCGCTCGACCTGGGCGCCGCTGTCCTGGTAGTCGAATACCAGGCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGGTGTTCCATTTCATCCAGGTCGCTCCCGAACTTGTCCCTTTCGACCCCCTCATCCATCACTTCGACCCGCAACTTCATGCGAGTGATCGGGGTTTG  >  NC_002947/2746773‑2747060
                                                                                                                                                |                                                                                                                                               
cctcaaggaacgcatgcagttgctggcggccatttcccacgacctgcaaaccccgatcactcgcatgaagttgcgggtcgatgtgatggatgagggggtcgaatgggacaagttcgggagagtcctggatgaaatggagcccctGGtgc                                                                                                                                             <  4:249741‑M1/5‑1 (MQ=255)
cACCAGTACCCGGCGCAGCGCATGCGGGCGGGTTTCCAGCAGGGTATCGCTGCTGGCGTGGCGCTCGACCTGGGCGCCGCTGTCCTGGTAGTCGAATACCAGGCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGtg                                                                                                                                              <  2:257631/148‑1 (MQ=255)
 aCCAGTACCCGGCGCAGCGCATGCGGGCGGGTTTCCAGCAGGGTATCGCTGCTGCCGTGGCGCTCGACCTGGGCGCCGCTGTCCTGGTAGTCGAATACCAGGCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGtgct                                                                                                                                            <  1:225820/149‑1 (MQ=255)
   cAGTACCCGGCGCAGCGCATGCGGGCGGGTTTCCAGCAGGGTATCGCTGCTGCCGTGGCGCTCGACCTGGGCGCCGCTGTCCTGGTAGTCGAATACCAGGCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGtgctgc                                                                                                                                          >  1:265389/1‑149 (MQ=255)
   cAGTACCCGGCGCAGCGCATGCGGGCGGGTTTCCAGCAGGGTATCGCTGCTGCCGTGGCGCTCGACCTGGGCGCCGCTGTCCTGGTAGTCGAATACCAGGCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGtgctgc                                                                                                                                          >  2:112654/1‑149 (MQ=255)
      tACCCGGCGCAGCGCATGCGGGCGGGTTTCCAGCAGGGTATCGCTGCTGCCGTGGCGCTCGACCTGGGCGCCGCTGTCCTGGTAGTCTAATACCAGGCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTGt                                                                                                                                       <  3:222316/149‑1 (MQ=255)
        cccGGCGCAGCGCATGCGGGCGGGTTTCCAGCAGGGTATCGCTGCTGCCGTGGCGCTCGACCTGGGCGCCGCTGTCCTGGTAGTCGAATACCAGGCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTc                                                                                                                                      >  8:219417/1‑148 (MQ=255)
         ccGGCGCAGCGCATGCGGGCGGGTTTCCAGCAGGGTATCGCTGCTGCCGTGGCGCTCGACCTGGGCGCCGCTGTCCTGGTAGTCGAATACCAGGCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCa                                                                                                                                    >  7:296921/1‑149 (MQ=255)
         ccGGCGCAGCGCATGCGGGCGGGTTTCCAGCAGGGTATCGCTGCTGCCGTGGCGCTCGACCTGGGCGCCGCTGTCCTGGTAGTCGAATACCAGGCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCa                                                                                                                                    >  5:143539/1‑149 (MQ=255)
            gcgcagcgcaTGCGGGCGGGTTTCCAGCAGGGTATCGCTGCTGCCGTGGCGCTCGACCTGGGCGCCGCTGTCCTGGTAGTCGAATACCAGGCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCAtgc                                                                                                                                 >  4:207567/1‑149 (MQ=255)
                    caTGCGGGCGGGTTTCCAGCAGGGTATCGCTGCTGCCGTGGCGCTCGACCTGGGCGCCGCTGTCCTGGTAGTCGAATACCAGGCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCa                                                                                                                         <  4:261758/149‑1 (MQ=255)
                     aTGCGGGCGGGTTTCCAGCAGGGTATCGCTGCTGCCGTGGCGCTCGACCTGGGCGCCGCTGTCCTGGTAGTCGAATACCAGGCTGTCGAGAAACGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCa                                                                                                                         >  8:4735/1‑148 (MQ=255)
                       gcgggcggGTTTCCAGCAGGGTATCGCTGCTGCCGTGGCGCTCGACCTGGGCGCCGCTGTCCTGGTATTCGAATACCATGCTGTCGAGAAAGGCATCAAGGTTGACGCGGCAGGTCGCTTCGGTGATGCTGTCCATGCTGCGGGCATac                                                                                                                      >  3:249741/1‑149 (MQ=255)
                               gTTTCCAGCAGGGTATCGCTGCTGCCGTGGCGCTCGACCTGGGCGCCGCTGTCCTGGTAGTCGAATACCAGGCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATacgccacgcc                                                                                                              >  7:78346/1‑149 (MQ=255)
                                tttCCAGCGGGGTATCGCTGCTGCCGTGGCGCTCGACCTGGGCGCCGCTGTCCTGGTACTCGAATACCAGGCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGATGTCCATGCTGCGGGCATACGCCACGCCt                                                                                                             >  2:105389/1‑149 (MQ=255)
                                   ccAGCAGGGTATCGCTGCTGCCGTGGCGCTCGACCTGGGCGCCGCTGTCCTGGTAGTCGAATACCAGGCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTcg                                                                                                          >  5:308989/1‑149 (MQ=255)
                                    cagcagGGTATCGCTGCTGCCGTGGCGCTCGACCTGGGCGCCGCTGTCCTGGTAGTCGAATACCAGGCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTcgc                                                                                                         <  5:159148/149‑1 (MQ=255)
                                          ggTATCGCTGCTGCCGTGGCGCTCGACCTGGGCGCCGCTGTCCTGGTAGTCGAATACCAGGCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCAc                                                                                                     >  7:276047/1‑147 (MQ=255)
                                          ggTATCGCTGCTGCCGTGGCGCTCGACCTGGGCGCCGCTGTCCTGGTAGTCGAATACCAGGCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCa                                                                                                   <  3:38117/149‑1 (MQ=255)
                                           gTATCGCTGCTGCCGTGGCGCTCGACCTGGGCGCCGCTGTCCTGGTAGTCGAATACCAGGCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAg                                                                                                  >  5:221652/1‑149 (MQ=255)
                                           gTATCGCTGCTGCCGTGGCGCTCGACCTGGGCGCCGCTGTCCTGGTAGTCGAATACCAGGCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAg                                                                                                  <  6:308989/149‑1 (MQ=255)
                                              caaaccccgatcactcgcatgaagttgcgggtcgaagtgatggatgggggggtcgaaagggacaagttcgggagcgacctggatgaaatggaacacctGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGgtg                                                                                               >  3:95349‑M1/99‑149 (MQ=255)
                                                gctgctGCCGTGGCGCTCGACCTGGGCGCCGCTGTCCTGGTAGTCGAATACCAGGCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGgtgt                                                                                              <  7:219417/148‑1 (MQ=255)
                                                    ctgcCGTGGCGCTCGACCTGGGCGCCGCTGTCCTGGTAGTCGAATACCAGGCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGGTGTTCCa                                                                                          <  8:78346/148‑1 (MQ=255)
                                                    ctgcCGTGGCGCTCGACCTGGGCGCCGCTGTCCTGGTAGTCGAATACCAGGCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGGTGTTCCAt                                                                                         <  2:265389/149‑1 (MQ=255)
                                                    ctgcCGTGGCGCTCGACCTGGGCGCCGCTGTCCTGGTAGTCGAATACCAGGCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGGTGTTCCAt                                                                                         <  1:95255/149‑1 (MQ=255)
                                                       ccGTGGCGCTCGACCTGGGCGCCGCTGTCCTGGTAGTCGAATACCAGGCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGGTGTTCCAttt                                                                                       >  2:324230/1‑148 (MQ=255)
                                                        cGTGGCGCTCGACCTGGGCGCCGCTGTCCTGGTAGTCGAATACCAGGCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGGTGTTCCATTTCa                                                                                     <  6:10467/149‑1 (MQ=255)
                                                        cGTGGCGCTCGACCTGGGCGCCGCTGTCCTGGTAGTCGAATACCAGGCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGGTGTTCCATTTCa                                                                                     <  8:276047/149‑1 (MQ=255)
                                                          tGGCGCTCGACCTGGGCGCCGCTGTCCTGGTAGTCGAATACCAGGCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGGTGTTCCATTTCa                                                                                     <  3:261018/147‑1 (MQ=255)
                                                          tGGCGCTCGACCTGGGCGCCGCTGTCCTGGTAGTCGAATACCAGGCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGGTGTTCCATTTCa                                                                                     >  4:261018/1‑147 (MQ=255)
                                                               cTCGACCTGGGCGCCGCTGTCCTGGTAGTCGAATACCAGGCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGGTGTTCCATTTCATCCAGGt                                                                              <  8:296921/149‑1 (MQ=255)
                                                               cTCGACCTGGGCGCCGCTGTCCTGGTAGTCGAATACCAGGCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCGGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGGTGTTCCATTTCATCCAGGt                                                                              <  2:266189/149‑1 (MQ=255)
                                                                tCGACCTGGGCGCCGCTGTCCTGGTAGTCGAATACCAGGCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGGTGTTCCATTTCATCCAGGTc                                                                             >  4:156991/1‑149 (MQ=255)
                                                                           gccgcTGTCCTGGTAGTCGAATACCAGGCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGGTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGGTGTTCCATTTCATCCAGGTCGCTCCCGAACt                                                                  <  7:4735/149‑1 (MQ=255)
                                                                            gtcgaagtgatggatgagggggtcgaaagggacaagttcgggagcgacctggatgaaatggagcacctGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCAcc                                                                                                    <  5:204283‑M1/46‑1 (MQ=255)
                                                                            gtcgaagtgatggatgagggggtcgaaagggacaagttcgggagcgacctggatgaaatggaccacctGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCAcc                                                                                                    >  6:204283‑M1/69‑114 (MQ=255)
                                                                                    cTGGTAGTCGAATACCAGGCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGGTGTTCCATTTCATCCAGGTCGCTCCCGAACTTGTCCCtt                                                          <  7:121055/148‑1 (MQ=255)
                                                                                       gTAGTCGAATACCAGGCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTGCCCATGCTGCGGGCATACGCCACGCCTTc                                                                                                           <  4:182793/96‑1 (MQ=255)
                                                                                             gAATACCAGGCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGGTGTTCCATTTCATCCAGGTCGCTCCCGAACTTGTCCCTTTCGACCCCCt                                                >  6:311712/1‑149 (MQ=255)
                                                                                              aaTACCAGGCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGGTGTTCCATTTCATCCAGGTCGCTCCCGAACTTGTCCCTTTCGAccccc                                                 <  2:161753/147‑1 (MQ=255)
                                                                                              aaTACCAGGCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGGTGTTCCATTTCATCCAGGTCGCTCCCGAACTTGTCCCTTTCGAccccc                                                 >  1:161753/1‑147 (MQ=255)
                                                                                                  ccAGTCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGGTGTTCCATTTCATCCAGGTCGCTCCCGAACTTGTCCCTTTCGACCCCCTcatcc                                           <  3:207567/149‑1 (MQ=255)
                                                                                                  ccAGGCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGATGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGGTGTTCCATTTCATCGAGGTCGCTCCCGAACTTGTCCCTTTCGACCCCCTcatcc                                           <  1:105389/149‑1 (MQ=255)
                                                                                                   cAGGCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGGTGTTCCATTTCATCCAGGTCGCTCCCGAACTTGTCCCTTTCGACCCCCTcatcca                                          >  3:270334/1‑149 (MQ=255)
                                                                                                      gCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGGTGTTCCATTTCATCCAGGTCGCTCCCGAACTTGTCCCTTTCGAccccc                                                 >  7:274971/1‑139 (MQ=255)
                                                                                                      gCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGGTGTTCCATTTCATCCAGGTCGCTCCCGAACTTGTCCCTTTCGAccccc                                                 <  8:274971/139‑1 (MQ=255)
                                                                                                          tCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGGTGTTCCATTTCATCCAGGTCGCTCCCGAACTTGTCCCTTTCGACCCCCTCATCCATCACtt                                    <  1:112654/148‑1 (MQ=255)
                                                                                                            gagaAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGACATACGCCACGCCTTCGCGCACCAGGTGTTCCATTTCATCCAGGTCGCTCCCGAACTTGTCCCTTTCGACCCCCTCATCCATCACTTCGa                                 >  8:200648/1‑149 (MQ=255)
                                                                                                                 aGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGGTGTTCCATTTCATCCAGGTCGCTCCCGAACTTGTCCCTTTCGACCCCCTCATCCATCACTTCGACCCg                             >  3:258531/1‑148 (MQ=255)
                                                                                                                     aTCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGGTGTTCCATTTCATCCAGGTCGCTCCCGAACTTGTCCCTTTCGACCCCCTCATCCATCACTTCGACCCGCAACt                        >  6:249761/1‑149 (MQ=255)
                                                                                                                     aTCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTCTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGGTGTTGCATTTCATCCAGGTCGCTCCCGAACTTGTCCCTATCGACCCCCTCATCCATCACATCGACCCGCACCt                        >  7:151350/1‑149 (MQ=255)
                                                                                                                         aGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGGTGTTCCATTTCATCCAGGTCGCTCCCGAACTTGTCCCTTTCGACCCCCTCATCCATCACTTCGACCCGCAACTTCAt                    <  6:221652/149‑1 (MQ=255)
                                                                                                                           gTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAg                                                                                                  >  4:236497/1‑69 (MQ=255)
                                                                                                                           gTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAg                                                                                                  <  3:236497/69‑1 (MQ=255)
                                                                                                                           gTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGGTGTTCCATTTCATCCAGGTCGCTCCCGAACTTGTCCCTTTCGACCCCCTCATCCATCAc                                      >  2:173416/1‑129 (MQ=255)
                                                                                                                           gTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGGTGTTCCATTTCATCCAGGTCGCTCCCGAACTTGTCCCTTTCGACCCCCTCATCCATCAc                                      <  1:173416/129‑1 (MQ=255)
                                                                                                                           gTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGGTGTTCCATTTCATCCAGGTCGCTCCCGAACTTGTCCCTTTCGACCCCCTCATCCATCACTTCGACCCGCAACTTCATGc                  >  4:123943/1‑149 (MQ=255)
                                                                                                                            ttGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGGTGTTCCATTTCATCCAGGTCGCTCCCGAACTTGTCCCTTTCGACCCCCTCATCCATCACTTCGACCCGCAACTTCATGc                  >  3:94611/1‑148 (MQ=255)
                                                                                                                               aCCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGGTGTTCCATTTCATCCAGGTCGCTCCCGAACTTGTCCCTTTCGACCCCCTCATCCATCACTTCGACCCGCAACTTCATGCGAGt              >  3:295618/1‑149 (MQ=255)
                                                                                                                                 ccGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGGTGTTCCATTTCATCCAGGTCGCTCCCGAACTTGTCCCTTTCGACCCCCTCATCCATCACTTCGACCCGCAACTTCATGCGAGTGa            >  2:60852/1‑149 (MQ=255)
                                                                                                                                 ccGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGGTGTTCCATTTCATCCAGGTCGCTCCCGAACTTGTCCCTTTCGACCCCCTCATCCATCACTTCGACCCGCAACTTCATGCGAGTGa            >  2:181124/1‑149 (MQ=255)
                                                                                                                                        gTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGGTGTTCCATTTCATCCAGGTCGCTCCCGAACTTGTCCCTTTCGACCCCCTCATCCATCACTTCGACCCGCAACTTCATGCGAGTGATCGGGGt     <  1:60852/149‑1 (MQ=255)
                                                                                                                                        gTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGGTGTTCCATTTCATCCAGGTCGCTCCCGAACTTGTCCCTTTCGACCCCATCATCCATCACTTCGACCCGCAACTTCATGCGAGTGATCGGGGt     >  2:22015/1‑149 (MQ=255)
                                                                                                                                         tCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGGTGTTCCATTTCATCCAGGTCGCTCCCGAACTTGTCCCTTTCGACCCCCTCATCCATCACTTCGACCCGCAACTTCATGCGAGTGATCGGGGtt    >  7:274520/1‑149 (MQ=255)
                                                                                                                                             ttCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGGTGTTCCATTTCATCCAGGTCGCTCCCGAACTTGTCCCTTTCGACCCCCTCATCCATCACTTCGACCCGCAACTTCATGCGa                <  6:93679/133‑1 (MQ=255)
                                                                                                                                             ttCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGGTGTTCCATTTCATCCAGGTCACTCCCGAACTTGTCCCTTTCGACCCCCTCATCCATCACTTCGACCCGCAACTTCATGCGAGTGATCGGGGTTTg  >  4:67986/1‑147 (MQ=255)
                                                                                                                                                |                                                                                                                                               
CACCAGTACCCGGCGCAGCGCATGCGGGCGGGTTTCCAGCAGGGTATCGCTGCTGCCGTGGCGCTCGACCTGGGCGCCGCTGTCCTGGTAGTCGAATACCAGGCTGTCGAGAAAGGCATCAAGGTTGACCCGGCAGGTCGCTTCGGTGCTGCTGTCCATGCTGCGGGCATACGCCACGCCTTCGCGCACCAGGTGTTCCATTTCATCCAGGTCGCTCCCGAACTTGTCCCTTTCGACCCCCTCATCCATCACTTCGACCCGCAACTTCATGCGAGTGATCGGGGTTTG  >  NC_002947/2746773‑2747060

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.