| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2816560 = | 42 (0.780) | 5 (0.100) | 4/256 | NT | 10.6% | coding (28/357 nt) | PP_2472 | MerR family transcriptional regulator |
| ? | NC_002947 | 2816653 = | 44 (0.840) | coding (121/357 nt) | PP_2472 | MerR family transcriptional regulator | |||||
GCGCTGGTAATACCGCCGGTTCCCCCGCCGCTTCACAGGGTTCAGCTGGTCGAACTCCTGCTCCCAATACCGCAGCACGTGTGGCTTTACGGCACACAACTCGCTCACTTCACCAATGGTGAAGTAGCGTTTGCCCGGTATGGGGGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2816709‑2816560‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCTGATGATCCGCCAGATTCGTGCGCTGCTGTATGACCAGGGGTTCACCATTGGCGGGGCGCGGTTGAGGCTCTCCAGTGAT > NC_002947/2816653‑2816799 GCGCTGGTAATACCGCCGGTTCCCCCGCCGCTTCACAGGGTTCAGCTGGTCGAACTCCTGCTCCCAATACCGCAGCACGTGTGGCTTTACGGCACACAACTCGCTCACTTCACCAATGGTGAAGTAGCGTTTGCCCGGTATGGGGGG < 2:284595/147‑1 CCTGCTCCCAATACCGCAGCACGTGTGGCTTTACGGCACACAACTCGCTCACTTCACCAATGGTGAAGTAGCGTTTGCCCGGTATGGGGGGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGC > 3:78369/1‑149 CTGCTCCCAATACCGCAGCACGTGTGGCTTTCCGGCACACAACTCGCTCACTTCACCAATGGTGAAGTAGCGTTTGCCCGGTATGGGGGGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTAC < 5:321906/144‑1 CTGCTCCCAATACCGCAGCACGTGTGGCTTTACGGCACACAACTCGCTCACTTCACCAATGGTGAAGTAGCGTTTGCCCGGTATGGGGGGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTAC > 6:321906/1‑144 CTGCTCCCAATACCGCAGCACGTGTGGCTTTACGGCACACAACTCGCTCACTTCACCAATGGTGAAGTAGCGTTTGCCCGGTATGGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCG > 4:271500/1‑149 TGGCTTTACGGCACACAACTCGCTCACTTCACCAATGGTGAAGTAGCGTTTGCCCGGTATGGGGAGCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCTGATGATCCGCCA < 3:271500/149‑1 GCAGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCTGATGATCCGCCAGATTCGTGCGCTGCTGTATGACCAGGGGTTCACCATTGGCGGGGCGCGGTTGAGGCTCTCCAGT > 5:164705/1‑148 AGGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCTGATGATCCGCCAGATTCGTGCGCTGCTGTATGACCAGGGGTTCACCATTGGCGGGGCGCGGTTGAGGCTCTCCAGTGAT > 1:95053/1‑149 GCGCTGGTAATACCGCCGGTTCCCCCGCCGCTTCACAGGGTTCAGCTGGTCGAACTCCTGCTCCCAATACCGCAGCACGTGTGGCTTTACGGCACACAACTCGCTCACTTCACCAATGGTGAAGTAGCGTTTGCCCGGTATGGGGGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2816709‑2816560‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagGAGTTCGACCAGCTGAACCCTGTGAAGCGGCGGGGGAACCGGCGGTATTACCAGCGCCAGGATGTGCTGATGATCCGCCAGATTCGTGCGCTGCTGTATGACCAGGGGTTCACCATTGGCGGGGCGCGGTTGAGGCTCTCCAGTGAT > NC_002947/2816653‑2816799 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |