New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 295679239 (0.720)3 (0.060) 3/248 NT 6.7% coding (1130/1383 nt) PP_2588 class III aminotransferase
?NC_002947 = 2956869 47 (0.930)coding (1207/1383 nt) PP_2588 class III aminotransferase

TATTCCGGCCACCCGGTGGCGGCGGCAGTGGCCATCGCCAACCTGAAGGCGCTGCGTGACGAAGGCATCGTGCGCCAGGTGAAGGACGACACGGGGCCGTACCTGCAGCGCATCCTGCGGGAAGTGTTTGCCGACCACCCATTGATCGGCCAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2956638‑2956792
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaggtCGTTCTCGTTGGCAAAGCGCTTGCGCGTCGGCTTGTGCTCGGCGAACTGCAGCGCCGCCACCAGCCCGGCCCCTTGCACCTGGCCGATCAATGGGTGGTCGGCAAACACTTCCCGCAGGATGCGCTGCAGGTACGGCCCCGTG  <  NC_002947/2956869‑2956727
                                                                                                                                                                                                                                                                                                          
TATTCCGGCCACCCGGTGGCGGCGGCAGTGGCCATCGCCAACCTGAAGGCGCTGCGTGACGAAGGCATCGTGCGCCAGGTGAAGGACGACACGGGGCCGTACCTGCAGCGCATCCTGCGGGAAGTGTTTGCCGACCACCCATTGATCGG                                                                                                                                                       >  6:217745/1‑149
     CGGCCACCCGGTGGCGGCGGCAGTGGCCATCGCCAACCTGAAGGCGCTGCGTGACGAAGGCATCGTGCGCCAGGTGAAGGACGACACGGGGCCGTACCTGCAGCGCATCCTGCGGGAAGTGTTTGCCGACCACCCATCGATCGGCCAG                                                                                                                                                   <  8:262155/148‑1
                                                                                             GGGCCGTACCTGCAGCGCATCCTGCGGGAAGTGTTTGCCGACCACCCATTGATCGGCCAGGTCGTTCTCGTTGGCAAAGCGCTTGCGCGTCGGCTTGTGCTCGGCGAACTGCAGCGCCGCCACCAGCCCGGCCCCTTGCACCTGGCCGA                                                          <  5:307851/149‑1
                                                                                                CCGTACCTGCAGCGCATCCTGCGGGAAGTGTTTGCCGACCACCCATTGATCGGCCAGGTCGTTCTCGTTGGCAAAGCGCTTGCGCGTCGGCTTGTGCTCGGCGAACTGCAGCGCCGCCACCAGCCCGGCCCCTTGCACCTGG                                                              >  1:195859/1‑142
                                                                                                CCGTACCTGCAGCGCATCCTGCGGGAAGTGTTTGCCGACCACCCATTGATCGGCCAGGTCGTTCTCGTTGGCAAAGCGCTTGCGCGTCGGCTTGTGCTCGGCGAACTGCAGCGCCGCCACCAGCCCGGCCCCTTGCACCTGG                                                              <  2:195859/142‑1
                                                                                                                                                     CCAGGTCGTTCTCGTTGGCAAAGCGCTTGCGCGTCGGCTTGTGCTCGGCGAACTGCAGCGCCGCCACCAGCCCGGCCCCTTGCACCTGGCCGATCAATGGGTGGTCGGCAAACACTTCCCGCAGGATGCGCTGCAGGTACGGCCCCGTG  <  8:288930/149‑1
                                                                                                                                                                                                                                                                                                          
TATTCCGGCCACCCGGTGGCGGCGGCAGTGGCCATCGCCAACCTGAAGGCGCTGCGTGACGAAGGCATCGTGCGCCAGGTGAAGGACGACACGGGGCCGTACCTGCAGCGCATCCTGCGGGAAGTGTTTGCCGACCACCCATTGATCGGCCAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2956638‑2956792
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaggtCGTTCTCGTTGGCAAAGCGCTTGCGCGTCGGCTTGTGCTCGGCGAACTGCAGCGCCGCCACCAGCCCGGCCCCTTGCACCTGGCCGATCAATGGGTGGTCGGCAAACACTTCCCGCAGGATGCGCTGCAGGTACGGCCCCGTG  <  NC_002947/2956869‑2956727

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.