| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3051334 = | 41 (0.760) | 6 (0.120) | 6/252 | NT | 13.9% | coding (34/1899 nt) | PP_2664 | two‑component system sensor histidine kinase/response regulator |
| ? | NC_002947 | 3051361 = | 35 (0.680) | coding (61/1899 nt) | PP_2664 | two‑component system sensor histidine kinase/response regulator | |||||
TACCTGCTCGGCCAGCACCACTGAATGCTGGAACGCGGCGTATGGGTCGTTGCCCCGGGTCACGCCCGACTCGATGCGCTCGATCAGTGCGTCATTGATACGCTGCAGCTTGTGGTTCTGATGCTGCAGCCGGGTCAGCTCGGCCTGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3051483‑3051334‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcagCATCAGAACCACAAGCTGCAGCGTATCAATGACGCACTGATCGAGCGCATCGAGTCGGGCGTGACCCGGGGCAACGACCCATACGCCGCGTTCCAGCATTCAGTGGTGCTGGCCGAGCAGGTACGCGAACGCACCGATGCGTTGAACC > NC_002947/3051361‑3051508 TACCTGCTCGGCCAGCACCACTGAATGCTGGAACGCGGCGTATGGGTCGTTGCCCCGGGTCACGCCCGACTCGATGCGCTCGATCAGTGCGGCATTGATACGCTGCAGCTTGTGGTTCTGATGCTGCAGCCGGGTCAGCTCGGCCTGCA < 5:50797/149‑1 GTTCTGATGCTGCAGCCGGGTCAGCTCGGCCTGCAGCATCAGAACCACAAGCTGCAGCGTATCAATGACGCACTGATCGAGCGCATCGAGTCGGGCGTGACCCGGGGCAACGACCCATACGCCGCGTTCCA < 1:317348/131‑1 GTTCTGATGCTGCAGCCGGGTCAGCTCGGCCTGCAGCATCAGAACCACAAGCTGCAGCGTATCAATGACGCACTGATCGAGCGCATCGAGTCGGGCGTGACCCGGGGCAACGACCCATACGCCGCGTTCCA > 2:317348/1‑131 TTCTGATGCTGCAGCCGGGTCAGCTCGGCCTGCAGCATCAGAACCACAAGCTGCAGCGTATCAATGACGCACTGATCGAGCGCATCGAGTCGGGCGTGACCCGGGGCAACGACCCATACGCCGCGTTCCAGCATTCAGTGGTGCTGGCC > 5:84518/1‑149 TCTGATGCTGCAGCCGGGTCAGCTCGGCCTGCAGCATCAGAACCACAAGCTGCAGCGTATCAATGTCGCACTGATCGAGCGCATCGAGTCGGGCGTGACCCGGGGCAACGACCCATACGCCGCGTTCCAGC > 7:295631/1‑131 TCTGATGCTGCAGCCGGGTCAGCTCGGCCTGCAGCATCAGAACCACAAGCTGCAGCGTATCAATGTCGCACTGATCGAGCGCATCGAGTCGGGCGTGACCCGGGGCAACGACCCATACGCCGCGTTCCAGC < 8:295631/131‑1 TGCTGCAGCCGGGTCAGCTCGGCCTGCAGCATCAGAACCACAAGCTGCAGCGTATCAATGACGCACTGATCGAGCGCATCGAGTCGGGCGTGACCCGGGGCAACGACCCATACGCCGCGTTCCAGCATTCAGTGGTGCTGGCCGAGCAG < 6:84518/149‑1 GCAGCATCAGAACCACAAGCTGCAGCGTATCAATGACGCACTGATCGAGCGCATCGAGTCGGGCGTGACCCGGGGCAACGACCCATACGCCGCGTTCCAGCATTCAGTGGTGCTGGCCGAGCAGGTACGCGAACGCACCGATGCGTTG > 7:274463/1‑148 CAGCATCAGAACCACAAGCTGCAGCGTATCAATGACGCACTGATCGAGCGCATCGAGTCGGGCGTGACCCGGGGCAACGACCCATACGCCGCGTTC < 3:14131/96‑1 CAGCATCAGAACCACAAGCTGCAGCGTATCAATGACGCACTGATCGAGCGCATCGAGTCGGGCGTGACCCGGGGCAACGACCCATACGCCGCGTTC > 4:14131/1‑96 GCATCAGAACCACAAGCTGCAGCGTATCAATGACGCACTGATCGAGCGCATCGAGTCGGGCGTGACCCGGGGCAACGACCCATACGCCGCGTTCCAGCATTCAGTGGTGCTGGCCGAGCAGGTACGCGAACGCACCGATGCGTTGAACC < 3:101913/149‑1 TACCTGCTCGGCCAGCACCACTGAATGCTGGAACGCGGCGTATGGGTCGTTGCCCCGGGTCACGCCCGACTCGATGCGCTCGATCAGTGCGTCATTGATACGCTGCAGCTTGTGGTTCTGATGCTGCAGCCGGGTCAGCTCGGCCTGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3051483‑3051334‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcagCATCAGAACCACAAGCTGCAGCGTATCAATGACGCACTGATCGAGCGCATCGAGTCGGGCGTGACCCGGGGCAACGACCCATACGCCGCGTTCCAGCATTCAGTGGTGCTGGCCGAGCAGGTACGCGAACGCACCGATGCGTTGAACC > NC_002947/3051361‑3051508 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |