| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3243408 = | 47 (0.870) | 4 (0.080) | 3/254 | NT | 8.7% | coding (1485/2289 nt) | PP_2839 | hypothetical protein |
| ? | NC_002947 | 3243481 = | 39 (0.750) | coding (1558/2289 nt) | PP_2839 | hypothetical protein | |||||
GCTGTAGAAGTGCCGCGGGCTCAACGTGGCGGAAAACAGCGTCACACTGCGCGCCGCCTGCATGCGTGGTGCCAGCAGCCGCGCCGGGGTGACATTGCGCAGGCACAGCGTGGCCAGCCGCCGCTTGCGCGGGCCCTGGCGCTGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3243555‑3243408‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctgCTGGCACCACGCATGCAGGCGGCGCGCAGTGTGACGCTGTTTTCCGCCACGTTGAGCCCGCGGCACTTCTACAGCGACCTGCTGGGCATGCCAGCCGATACCGCCTGGCTGGAC > NC_002947/3243481‑3243594 GCTGTAGAAGTGCCGCGGGCTCAACGTGGCGGAAAACAGCGTCACACTGCGCGCCGCCTGCATGCGTGGTGCCAGCAGCCGCGCCGGGGTGACATTGCGCAGGCACAGCGTGGCCAGCCGCCGCTTGCGCGGGCCCTGGCGCTGGCTG < 3:319233/148‑1 CCAGCAGCCGCGCCGGGGTGACATTGCGCAGGCACAGCGTGGCCAGCCGCCGCTTGAGCGGGCCCTGGCGCTGGCTGCTGGCACCACGCATGCAGGCGGCGCGCAGTGTGACGCTGTTTTCCGCCACGTTGAGCCCGAGGCACTTCTAC > 8:212093/1‑149 CCAGCAGCCGCGCCGGGGTGACATTGCGCAGGCACAGCGTGGCCAGCATCCGCTTGCGCGGGCCCTGGCGCTGGCTGCTGGCACCACGCATGCAGGCGGCGCGCAGTGTGACGCTGTTTTCCTCCACGTTGAGCCCGAGGCACTTCTA > 8:212094/1‑148 GCCGCGCCGGGGTGACATTGCGCAGGCACAGCGTGGCCAGCCGCCGCTTGCGCGGGCCCTGGCGCTGGCTGCTGGCACCACGCATGCAGGCGGCGCGCAGTGTGACGCTGTTTTCCGCCACGTTGAGCCCGCGGCACTTCTACAGCGAC > 5:207262/1‑149 GCGCAGGCACAGCGTGGCCAGCCGCCGCTTGCGCGGGCCCTGGCGCTGGCTGCTGGCACCACGCATGCAGGCGGCGCGCAGTGTGACGCTGTTTTCCGCCACGTTGAGCCCGCGGCACTTCTACAGCGACCTGCTGGGCATGCCAGCC < 6:207262/148‑1 CTGCTGGCACCACGCATGCAGGCGGCGCGCAGTGTGACGCTGTTTTCCGCCACGTTGAGCCCGCGGCACTTCTACAGCGACCTGCTGGGCATGCCAGCCGATACCGCCTGGCTGGAC > 5:234774/1‑117 CTGCTGGCACCACGCATGCAGGCGGCGCGCAGTGTGACGCTGTTTTCCGCCACGTTGAGCCCGCGGCACTTCTACAGCGACCTGCTGGGCATGCCAGCCGATACCGCCTGGCTGGAC < 6:234774/117‑1 GCTGTAGAAGTGCCGCGGGCTCAACGTGGCGGAAAACAGCGTCACACTGCGCGCCGCCTGCATGCGTGGTGCCAGCAGCCGCGCCGGGGTGACATTGCGCAGGCACAGCGTGGCCAGCCGCCGCTTGCGCGGGCCCTGGCGCTGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3243555‑3243408‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctgCTGGCACCACGCATGCAGGCGGCGCGCAGTGTGACGCTGTTTTCCGCCACGTTGAGCCCGCGGCACTTCTACAGCGACCTGCTGGGCATGCCAGCCGATACCGCCTGGCTGGAC > NC_002947/3243481‑3243594 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |