New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3243408 = | 47 (0.870) | 4 (0.080) | 3/254 | NT | 8.7% | coding (1485/2289 nt) | PP_2839 | hypothetical protein |
? | NC_002947 | 3243481 = | 39 (0.750) | coding (1558/2289 nt) | PP_2839 | hypothetical protein |
GCGCCCTGCAGCAGTGCGTCGGGGTGATTCAGGAACAGATGAACCAGGCACCCACGCACATCGACCCCCAGGTGTTGCAGTTCTACTATCAGGCCTTGCAGTTCTGCCGGGTTGCCGAGCTGTTCGACGAGCATTTTCTGTTCGACATCAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCTGGCCACGCTGTGCCTGCGCAATGTCACCCCGGCGCGGCTGCTGGCACCACGCATGCAGGCGGCGCGCAGTGTGACGCTGTTTTCCGCCACGTTGAGCCCGCGGCACTTCTACAGC > NC_002947/3243260‑3243555 | gcgcCCTGCAGCAGTGCGTCGGGGTGATTCAGGAACAGATGAACCAGGCACCCACGCACATCGACCCCCAGGTGTTGCAGTTCTACTATCAGGCCTTGCAGTTCTGCCGGGTTGCCGAGCTGTTCGACGAGCATTTTCTGTTCGACATc < 4:274626/149‑1 (MQ=255) cgcCCTGCAGCAGTGCGTCGGGGTGATTCAGGAACAGATGAACCAGGCACCCACGCACATCGACCCCCAGGTGTTGCAGTTCTACTATCAGGCCTTGCAGTTCTGCCGGGTTGCCGAGCTGTTCGACGAGCATTTTCTGTTCGACATca < 7:46534/149‑1 (MQ=255) gcagcaGTGCGTCGGGGTGATTCAGGAACAGATGAACCAGGCACCCACGCACATCGACCCCCAGGTGTTGCAGTTCTACTATCAGGCCTTGCAGTTCTGCCGGGTTGCCGAGCTGTTCGACGAGCATTTTCTGTTCGACATcagccagc > 4:156462/1‑149 (MQ=255) cGGGGTGATTCAGGAACAGATGAACCAGGCACCCACGCACATCGACCCCCAGGTGTTGCAGTTCTACTATCAGGCCTTGCAGTTCTGCCGGGTTGCCGAGCTGTTCGACGAGCATTTTCTGTTCGACATCAGCCAGCGCCAGGGCCcgc > 2:282262/1‑149 (MQ=255) gggTGATTCAGGAACAGATGAACCAGGCACCCACGCACATCGACCCCCAGGTGTTGCAGTTCTACTATCAGGCCTTGCAGTTCTGCCGGGTTGCCGAGCTGTTCGACGAGCATTTTCTGTTCGACATCAGCCAGCGCCAGGGCCcgcg > 4:97700/1‑148 (MQ=255) ggTGATTCAGGAACAGATGAACCAGGCACCCACGCACATCGACCCCCAGGTGTTGCAGTTCTACTATCAGGCCTTGCAGTTCTGCCGGGTTGCCGAGCTGTTCGACGAGCATTTTCTGTTCGACATCAGCCAGCGCCAGGGCCCgcgc > 5:267749/1‑148 (MQ=255) ttCAGGAACAGATGAACCAGGCACCCACGCACATCGACCCCCAGGTGTTGCAGTTCTACTATCAGGCCTTGCAGTTCTGCCGGGTTGCCGAGCTGTTCGACGAGCATTTTCTGTTCGACATCAGCCAGCGCCAGGGCCCGCGCAAgcgg < 1:282262/149‑1 (MQ=255) aGGAACAGATGAACCAGGCACCCACGCACATCGACCCCCAGGTGTTGCAGTTCTACTATCAGGCCTTGCAGTTCTGCCGGGTTGCCGAGCTGTTCGACGAGCATTTTCTGTTCGACATCAGCCAGCGCCAGGGCCCGCGCAAgcggcg < 3:301963/148‑1 (MQ=255) aGGAACAGATGAACCAGGCACCCACGCACATCGACCCCCAGGTGTTGCAGTTCTACTATCAGGCCTTGCAGTTCTGCCGGGTTGCCGAGCTGTTCGACGAGCATTTTCTGTTCGACATCAGCCAGCGCCAGGGCCCGCGCAAgcggcg < 3:297161/148‑1 (MQ=255) gAACAGATGAACCAGGCACCCACGCACATCGACCCCCAGGTGTTGCAGTTCTACTATCAGGCCTTGCAGTTCTGCCGGGTTGCCGAGCTGTTCGACGAGCATTTTCTGTTCGACATCAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCt > 1:147888/1‑149 (MQ=255) gAACAGATGAACCAGGCACCCACGCACATCGACCCCCAGGTGTTGCAGTTCAACTATCAGGCCTTGCAGTTCTGCCGGGTTGCCGAGCTGTTCGACGAGCATTTTCTGTTCGACATCAGCCAGCGCCAGGGCCcg < 4:259284/135‑1 (MQ=255) gAACAGATGAACCAGGCACCCACGCACATCGACCCCCAGGTGTTGCAGTTCAACTATCAGGCCTTGCAGTTCTGCCGGGTTGCCGAGCTGTTCGACGAGCATTTTCTGTTCGACATCAGCCAGCGCCAGGGCCcg > 3:259284/1‑135 (MQ=255) gtccagccaggcggtatcggctggcatgcccagcaggtcgctgtagaagtgccgcgggctcaacgtggcggaaaacagcgtcacactgcgcgccgcctgcatgcgtggtgccagcag < 6:234774‑M1/3‑1 (MQ=255) gtccagccaggcggtatcggctggcatgcccagcaggtcgctgtagaagtgccgcgggctcaacgtggcggaaaacagcgtcacactgcgcgccgcctgcatgcgtggtgccagcag > 5:234774‑M1/115‑117 (MQ=255) aCAGATGAACCAGGCACCCACGCACATCGACCCCCAGGTGTTGCAGTTCTACTATCAGGCCTTGCAGTTCTGCCGGGTTGCCGAGCTGTTCGACGAGCATTTTCTGTTCGACATCAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCTgg < 6:333524/149‑1 (MQ=255) aCAGATGAACCAGGCACCCACGCACATCGACCCCCAGGTGTTGCAGTTCTACTATCAGGCCTTGCAGTTCTGCCGGGTTGCCGAGCTGTTCGACGAGCATTTTCTGTTCGACATCAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCTgg < 4:139963/149‑1 (MQ=255) aCAGATGAACCAGGCACCCACGCACATCGACCCCCAGGTGTTGCAGTTCTACTATCAGGCCTTGCAGTTCTGCCGGGTTGCCGAGCTGTTCGACGAGCATTTTCTGTTCGACATCAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCTgg < 3:156462/149‑1 (MQ=255) aaCCAGGCACCCACGCACATCGACCCCCAGGTGTTGCAGTTCTACTATCAGGCCTTGCAGTTCTGCCGGGTTGCCGAGCTGTTCGACGAGCATTTTCTGTTCGACATCAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCTGGCCACGCt > 4:104777/1‑149 (MQ=255) aCCAGGCACACACGAACATCGACCCCCAGGTGTTGCAGTTCTACTATCAGGCCTTGCAGTTCTGCGGGGTTGCCGAGCTGTTCGACGAGCATTTTCTGTTCGACATCAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCTGGCCACGCtg > 2:107165/1‑149 (MQ=255) cAGGCACCCACGCACATCGACCCCCAGGTGTTGCAGTTCTACTATCAGGCCTTGCAGTTCTGCCGGGTTGCCGAGCTGTTCGACGAGCATTTTCTGTTCGACATCAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCTGGCCACGCtgtg > 2:87819/1‑149 (MQ=255) ccACGCACATCGACCCCCAGGTGTTGCAGTTCTACTATCTGGCCTTGCAGTTCTGCCGGGTTGCCGAGCTGTTCGACGAGCATATTCTGTTAGACATCAGCCAGCGCCAGGGCCCGCGCAAGCCGCGGCTGGCCCCGCTGTGACTgcg > 8:148817/1‑148 (MQ=255) ggctggcatgcccagcaggtcgctgtagaagtgccgcgggctcaacgtggcggaaaacagcgtcacactgcgcgccgcctgcatgcgtggtgccagCAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCTGGCCACGCTGTGCCTgcgc < 6:207262‑M1/52‑1 (MQ=255) cGCACATCGACCCCCAGGTGTTGCAGTTCTACTATCAGGCCTTGCAGTTCTGCCGGGTTGCCGAGCTGTTCGACGAGCATTTTCTGTTCGACATCAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCTGGCCACGCTGTGCCTGCGCAAt < 3:97700/149‑1 (MQ=255) cGCACATCGACCCCCAGGTGTTGCAGTTCTACTATCAGGCCTTGCAGTTCTGCCGGGTTGCCGAGCTGTTCGACGAGCATTTTCTGTTCGACATCAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCTGGCCACGCTGTGCCTGCGCAAt < 1:62546/149‑1 (MQ=255) acaTCGACCCCCAGGTGTTGCAGTTCTACTATCAGGCCTTGCAGTTCTGCCGGGTTGCCGAGCTGTTCGACGAGCATTTTCTGTTCGACATCAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCTGGCCACGCTGTGCCTGCGCAATGt > 4:68366/1‑148 (MQ=255) cccccAGGTGTTGCAGTTCTACTATCAGGCCTTGCAGTTCTGCCGGGTTGCCGAGCTGTTCGACGAGCATTTTCTGTTCGACATCAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCTGGCCACGCTGTGCCTGCGCAATGTCACCCCgg > 3:123567/1‑149 (MQ=255) gtcgctgtagaagtgccgcgggctcaacgtggcggaaaacagcgtcacactgcgcgccgcctgcatgcgtggtgccagCAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCTGGCCACGCTGTGCCTGCGCAATGTCACCCCGGCGCGgc > 5:207262‑M1/79‑149 (MQ=255) gtTGCAGTTCTACTATCAGGCCTTGCAGTTCTGCCGGGTTGCCGAGCTGTTCGACGAGCATTTTCTGTTCGACATCAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCTGGCCACGCTGTGCCTGCGCAATGTCACCCCGGCGCGgctgc > 6:250963/1‑149 (MQ=255) gtagaagtgcctcgggctcaacgtggcggaaaacagcgtcacactgcgcgccgcctgcatgcgtggtgccagCAGCCAGCGCCAGGGCCCGCTCAAGCGGCGGCTGGCCACGCTGTGCCTGCGCAATGTCACCCCGGCGCGGCTGCTgg > 8:212093‑M1/73‑149 (MQ=255) gCAGTTCTACTATCAGGCCTTGCAGTTCTGCCGGGTTGCCGAGCTGTTCGACGAGCATTTTCTGTTCGACATCAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCTGGCCACGCTGTGCCTGCGCAATGTCACCCCGGCGCGGctgctg < 1:87819/148‑1 (MQ=255) tagaagtgcctcgggctcaacgtggaggaaaacagcgtcacactgcgcgccgcctgcatgcgtggtgccagCAGCCAGCGCCAGGGCCCGCGCAAGCGGATGCTGGCCACGCTGTGCCTGCGCAATGTCACCCCGGCGCGGCTGCTgg > 8:212094‑M1/72‑148 (MQ=255) cAGTTCTACTATCAGGCCTTGCAGTTCTGCCGGGTTGCCGAGCTGTTCGACGAGCATTTTCTGTTCGACATCAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCTGGCCACGCTGTGCCTGCGCAATGTCACCCCGGCGCGGCTGCTgg > 5:190675/1‑148 (MQ=255) cAGTTCTACTATCAGGCCTTGCAGTTCTGCCGGGTTGCAGAGCTGTTCGACGAGCATTTTCTGTTCGACATCAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCTGGCCACGCTGTGCCTGCGCAATGTCACCCCGGCGCGGctgctgtc < 3:104777/149‑3 (MQ=255) cAGTTCTACTATCAGGCCTTGCAGTTCTGCCGGGTTGACGAGCTCTTCGACGAGCATTTTCTGTTCGACATCAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCTGTCCACGCTGTGCCTGCGCAATGTCACGCCGGCGCGGCTGCTGGc < 6:223160/149‑1 (MQ=255) aGTTCTACTATCAGGCCTTGCAGTTCTGCCGGGTTGCCGAGCTGTTCGACGAGCATTTTCTGTTCGACATCAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCTGGCCACGCTGTGCCTGCGCAATGTCACCCCGGCGCGGCTGCTGGca > 6:261813/1‑149 (MQ=255) ctactaTCAGGCCTTGCAGTTCTGCCGGGTTGCCGAGCTGTTCGACGAGCATTTTCTGTTCGACATCAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCTGGCCACGCTGTGCCTGCGCAATGTCACCCCGGCGCGGCTGCTGGcacca < 6:190675/148‑1 (MQ=255) aTCAGGCCTTGCAGTTCTGTCTGGTTGCCGAGCTGTTCGACGAGCTTTTTCTGTTCGACATCAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCTGGCCACGCTGTGCCTGCGCATTGTCACCCCGGCGCGGCTGCTGGCACCACGCAt < 8:147162/148‑1 (MQ=255) aGGCCTTGCAGTTCTGCCGGGTTGCCGAGCTGTTCGACGAGCATTTTCTGTTCGACATCAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCTGGCCACGCTGTGCCTGCGCAATGTCACCCCGGCGCGGCTGCTGGCACCACGCATGCa < 4:123567/148‑1 (MQ=255) aGTTCTGCCGGGTTGCCGAGCTGTTCGACGAGCATTTTCTGTTCGACATCAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCTGGCCACGCTGTGCCTGCGCAATGTCACCCCGGCGCGGCTGCTGGCACCAAGCATGCAGGCGgcgcg > 3:55945/1‑148 (MQ=255) cTGCCGGGTTGCCGAGCTGTTCGACGAGCATTTTCTGTTCGACATCAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCTGGCCACGCTGTGCCTGCGCAATGTCACCCCGGCGCGGCTGCTGGCACCACGCATGTAGGCGGCGCGCAgt < 2:147888/148‑1 (MQ=255) gTTGCCGAGCTGTTCGACGAGCATTTTCTGTTCGACATCAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCTGGCCACGCTGTGCCTGCGCAATGTCACCCCGGCGCGGCTGCTGGCACCACGCATGCAGGCGGCGCGCAGTGTGACGCt < 3:68366/149‑1 (MQ=255) ccGAGCTGTTCGACGAGCATTTTCTGTTCGACATCAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCTGGCCACGCTGTGCCTGCGCAATGTCACCCCGGCGCGGCTGCTGGCACCACGCATGCAGGCGGCGCGCAGTGTGACGCTGttt > 3:150967/1‑149 (MQ=255) cGAGCTGTTCGACGAGCATTTTCTGTTCGACATCAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCTGGCCACGCTGTGCCTGCGCAATGTCACCCCGGCGCGGCTGCTGGCACCACGCATGCAGGCGGCGCGCAGTGTGACGCTGttt > 8:154749/1‑148 (MQ=255) aGCTGTTCGACGAGCATTTTCTGTTCGACATCAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCTGGCCACGCTGTGCCTGCGCAATGTCACCCCGGCGCGGCTGCTGGCACCACGCATGCAGGCGGCGCGCAGTGTGACGCTGTTTTcc > 4:185395/1‑149 (MQ=255) aGCTGTTCGACGAGCAGTTTCTGTTCGACATCAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCTGGCCACGCTGTGCCTGCGCAATGTCACCCCGGCGCGGCTGCTGGCACCACGCATGCAGGCGGCGCGCAGTGTGACGCTGTTTTcc < 8:64991/149‑1 (MQ=255) ttCGACGAGCATTTTCTGTTCGACATCAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCTGGCCACGCTGTGCCTGCGCAATGTCACCCCGGCGCGGCTGCTGGCACCACGCATGCAGGCGGCGCGCAGTGTGACGCTGTTTTCCGCCAc < 5:223019/149‑1 (MQ=255) cgaGCATTTTCTGTTCGACATCAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCTGGCCACGCTGTGCCTGCGCAATGTCACCCCGGCGCGGCTGCTGGCACCACGCATGCAGGCGGCGCGCAGTGTGACGCTGTTTTCCGCCACGTTGa < 7:154749/149‑1 (MQ=255) gaGCATTTTCTGTTCGACATCAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCTGGCCACGCTGTGCCTGCGCAATGTCACCCCGGCGCGGCTGCTGGCACCACGCATGCAGGCGGCGCGCAGTGTGACGCTGTTTTCCGCCACGTTGAg < 3:185395/149‑1 (MQ=255) cATTTTCTGTTCGACATCAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCTGGCCACGCTGTGCCTGCGCAATGTCACCCCGGCGCGGCTGCTGGCACCACGCATGCAGGCGGCGCGCAGTGTGACGCTGTTTTCCGCCACGTTGAGccc > 7:36539/1‑149 (MQ=255) cATTTTCTGTTCGACATCAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCTGGCCACGCTGTGCCTGCGCAATGTCACCCCGGCGCGGCTGCTGGCACCACGCATGCAGGCGGCGCGCAGTGTGACGCTGTTTTCCGCCACGTTGAGccc > 7:59877/1‑149 (MQ=255) ttttCTGTTCGACATCAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCTGGCCACGCTGTGCCTGCGCAATGTCACCCCGGCGCGGCTGCTGGCACCACGCATGCAGGCGGCGCGCAGTGTGACGCTGTTTTCCGCCACGTTGAGCCcgc < 8:59877/149‑1 (MQ=255) ttCTGTTCGACATCAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCTGGCCACGCTGTGCCTGCGCAATGTCACCCCGGCGCGGCTGCTGGCACCACGCATGCAGGCGGCGCGCAGTGTGACGCTGTTTTCCGc < 2:232618/133‑1 (MQ=255) ttCTGTTCGACATCAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCTGGCCACGCTGTGCCTGCGCAATGTCACCCCGGCGCGGCTGCTGGCACCACGCATGCAGGCGGCGCGCAGTGTGACGCTGTTTTCCGc > 1:232618/1‑133 (MQ=255) tCGACATCAGACAGCGCCAGGTCCCGCGCAAGCGGCGGCTGGCCACGCTGTGCCTGCGCAATGTCACCCCGGCGCGGCTGCTGGCACCACGCATGCAGGCGGCGCGCAGTGTGACGCTGTTTTCCGCCACGTTGAGCCCGCGGCACTTc > 3:188178/1‑149 (MQ=255) cGACATCAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCTGGCCACGCTGTGCCTGCGCAATGTCACCCCGGCGCGGCTGCTGGCACCACGCATGCAGGCGGCGCGCAGTGTGACGCTGTTTTCCGCCACGTTGAGCCCGCGGCACTTc < 6:267749/148‑1 (MQ=255) gACATCAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCTGGCCACGCTGTGCCTGCGCAATGTCACCCCGGCGCGGCTGCTGGCACCACGCATGCAGGCGGCGCGCAGTGTGACGCTGTTTTCCGCCACGTTGAGCCCGCGGCACTTCTa > 2:199414/1‑149 (MQ=255) CAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCTGGCCACGCTGTGCCTGCGCAATGTCACCCCGGCGCGGCTGCTGGCACCACGCATGCAGGCGGCGCGCAGTGTGACGCTGTTTTCCGCCACGTTGAGCCCGCGGCACTTCTACAGc < 3:319233‑M1/148‑1 (MQ=255) | GCGCCCTGCAGCAGTGCGTCGGGGTGATTCAGGAACAGATGAACCAGGCACCCACGCACATCGACCCCCAGGTGTTGCAGTTCTACTATCAGGCCTTGCAGTTCTGCCGGGTTGCCGAGCTGTTCGACGAGCATTTTCTGTTCGACATCAGCCAGCGCCAGGGCCCGCGCAAGCGGCGGCTGGCCACGCTGTGCCTGCGCAATGTCACCCCGGCGCGGCTGCTGGCACCACGCATGCAGGCGGCGCGCAGTGTGACGCTGTTTTCCGCCACGTTGAGCCCGCGGCACTTCTACAGC > NC_002947/3243260‑3243555 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |