| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3443566 = | 9 (0.170) | 3 (0.060) | 3/252 | NT | 17.3% | coding (2325/3270 nt) | PP_3062 | tail length determination protein |
| ? | NC_002947 | 3443605 = | 20 (0.390) | coding (2364/3270 nt) | PP_3062 | tail length determination protein | |||||
TACGACACTGCCGGATCAGCCTTGACCGGAGCCGTGGCGGGCTCAGGCTCGACTTCCTTGGCTGGCATCACCGTTACGCGTAACGCTTTACCCAGTGCCGGCGGCGATTCCGGCTCGGCTTGATCGTCGGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3443700‑3443566‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcACTGGGTAAAGCGTTACGCGTAACGGTGATGCCAGCCAAGGAAGTCGAGCCTGAGCCCGCCACGGCTCCGGTCAAGGCTGATCCGGCAGTGTCGTATGATCCGCGCGACCCGGCATCGAAAGACCCGGTCGTGTTGCCGGCACTC > NC_002947/3443605‑3443749 TACGACACTGCCGGATCAGCCTTGACCGGAGCCGTGGCGGGCTCAGGCTCGACTTCCTTGGCTGGCATCACCGTTACGCGTAACGCTTTACCCAGTGCCGGCGGCGATTCCGGCTCGGCTTGATCGTCGGCCGG > 1:16427/1‑134TACGACACTGCCGGATCAGCCTTGACCGGAGCCGTGGCGGGCTCAGGCTCGACTTCCTTGGCTGGCATCACCGTTACGCGTAACGCTTTACCCAGTGCCGGCGGCGATTCCGGCTCGGCTTGATCGTCGGCCGG < 2:16427/134‑1 CCCAGTGCCGGCGGCGATTCCGGCTCGGCTTGATCGTCGGCCGGCACTGGGTAAAGCGTTACGCGTAACGGTGATGCCAGCCAAGGAAGTCGAGCCTGAGCCCGCCACGGCTCCGGTCAAGGCTGATCCGGCAGTGTCGTATGATCCGC > 4:172541/1‑149 GTGCCGGCGGCGATTCCGGCTCGGCTTGATCGTCGGCCGGCACTGGGTAAAGCGTTACGCGTAACGGTGATGCCAGCCAAGGAAGTCGAGCCTGAGCCCGCCACGGCTCCGGTCAAGGCTGATCCGGCAGTGTCGTATGATCCGCGCGA > 7:290988/1‑149 CCGGCGGCGATTCCGGCTCGGCTTGATCGTCGGCCGGCACTGGGTAAAGCGTTACGCGTAACGGTGATGCCAGCCAAGGAAGTCGAGCCTGAGCCCGCCACGGCTCCGGTCAAGGCTGATCCGGCAGTGTCGTATGATCCGCGCGACCC > 3:267990/1‑149 GTCGGCCGGCACTGGGTAAAGCGTTACGCGTAACGGTGATGCCAGCCAAGGAAGTCGAGCCTGAGCCCGCCACGGCTCCGGTCAAGGCTGATCCGGCAGTGTCGTATGATCCGCGCGACCCGGCATCGAAAGACCCGGTCGTGTTGCCG < 3:172541/149‑1 GCCGGCACTGGGTAAAGCGTTACGCGTAACGGTGATGCCAGCCAAGGAAGTCGAGCCTGAGCCCGCCACGGCTCCGGTCAAGGCTGATCCGGCAGTGTCGTATGATCCGCGCGACCCGGCATCGAAAGACCCGGTCGTGTTGCCGGCAC < 5:186931/149‑1 CGGCACTGGGTAAAGCGTTACGCGTAACGGTGATGCCAGCAAAGGAAGTCGAGCCTGAGCCCGCCACGGCTCCGGTCAAGGCTGATCCGGCAGTGTCGTATGATCCGCGCGACCCGGCATCGAAAGACCCGGTCGTGTTGCCGGCACTC < 4:249544/149‑1 TACGACACTGCCGGATCAGCCTTGACCGGAGCCGTGGCGGGCTCAGGCTCGACTTCCTTGGCTGGCATCACCGTTACGCGTAACGCTTTACCCAGTGCCGGCGGCGATTCCGGCTCGGCTTGATCGTCGGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3443700‑3443566‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcACTGGGTAAAGCGTTACGCGTAACGGTGATGCCAGCCAAGGAAGTCGAGCCTGAGCCCGCCACGGCTCCGGTCAAGGCTGATCCGGCAGTGTCGTATGATCCGCGCGACCCGGCATCGAAAGACCCGGTCGTGTTGCCGGCACTC > NC_002947/3443605‑3443749 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |