| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3547416 = | 47 (0.870) | 4 (0.080) | 3/252 | NT | 8.7% | coding (361/1377 nt) | PP_3132 | polysaccharide transporter |
| ? | NC_002947 | 3547489 = | 39 (0.760) | coding (434/1377 nt) | PP_3132 | polysaccharide transporter | |||||
GGCAAGGTCGACCAATACCACGCGCTTTTGTTGGAAAGTGCGTACCGCCACATCTATCTTGGTGGACTGGAAACCCCAGATGGCCGCCGACAGGCCGGTGACCGCCAGTACCATCGGCAGTACCGGCGCGGCATAGGTCGAGTCGGCCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3547568‑3547416‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggccaTCTGGGGTTTCCAGTCCACCAAGATAGATGTGGCGGTACGCACTTTCCAACAAAAGCGCGTGGTATTGGTCGACCTTGCCTCGCAGGTGGCGGGCCTGGTGGTGATGCTCGTGCTGGGCTTGCTGACCCATTCGATCTGGGCGCTGG > NC_002947/3547489‑3547635 GGCAAGGTCGACCAATACCACGCGCTTTTGTTGGAAAGTGCGTACCGCCACATCTATCTTGGTGGACTGGAAACCCCAGATGGCCGCCGACAGGCCGGTGACCGCCAGTACCATCGGCAGTACCGGCGCGGCATAGGTCGAGTCGGCCG > 3:93902/1‑149 CGCCACATCTATCTTGGTGGACTGGAAACCCCAGATGGCCGCCGACAGGCCGGTGACCGCCAGTACCATCGGCAGTACCGGCGCGGCATAGGTCGAGTCGGCCGGC > 3:115131/1‑106 CGCCACATCTATCTTGGTGGACTGGAAACCCCAGATGGCCGCCGACAGGCCGGTGACCGCCAGTACCATCGGCAGTACCGGCGCGGCATAGGTCGAGTCGGCCGGC < 4:115131/106‑1 CAGATGGCCGCCGACAGGCCGGTGACCGCCAGTACCATCGGCAGTACCGGCGCGGCATAGGTCGAGTCGGCCGGCCATCTGGGGTTTCCAGTCCACCAAGATAGATGTGGCGGTACGCACTTTCCAACAAAAGCGCGTGGTATTGGTC > 7:218121/1‑148 CAGATGGCCGCCGACAGGCCGGTGACCGCCAGTACCATCCGCAGTACCGGCGCGGCATAGGTCGAGT‑‑‑‑CGTCCATCTGGGGTTTCCAGTCCACCAAGATAGATGTGTCGGTACGCACATTGAAACAAAAGCGCGTGCTATTTGTCGcact > 8:265043/1‑145 GCCGCCGACAGGCCGGTGACCGCCAGTACCATCGGCAGTACCGGCGCGGCATAGGTCGAGTCGGCCGGCCATCTGGGGTTTCCAGTCCACCAAGATAGATGTGGCGGTACGCACTTTCCAACAAAAGCGCGTGGTATTGGTCGACCTTG > 7:68435/1‑149 TACCATCGGCAGTACCGGCGCGGCATAGGTCGAGTCGGCCGGCCATCTGGGGTTTCCAGTCCACCAAGATAGATGTGGCGGTACGCACTTTCCAACAAAAGCGCGTGGTATTGGTCGACCTTGCCTCGCAGGTGGCGGGCCTGGTGGTG < 8:68435/149‑1 CGGCCATCTGGGGTTTCCAGTCCACCAAGATAGATGTGGCGGTACGCACTTTCCAACAAAAGCGCGTGGTATTGGTCGACCTTGCCTCGCAGGTGGCGGGCCTGGTGGTGATGC < 5:37613/114‑1 CGGCCATCTGGGGTTTCCAGTCCACCAAGATAGATGTGGCGGTACGCACTTTCCAACAAAAGCGCGTGGTATTGGTCGACCTTGCCTCGCAGGTGGCGGGCCTGGTGGTGATGC > 6:37613/1‑114 CATCTGGGTTTTCCAGTCCACCAAGATAGATGTGGCGGTACGCACTTTCGAACAAAAGCGCGTGGTATTGGTCGACCTTGCCTCGCAGGTGGCGGGCCTGGTGGTTATGCTCGTGCTGGGCTTGCTGACCCATTCGATCTGGGCGCTGG < 2:174621/149‑1 GGCAAGGTCGACCAATACCACGCGCTTTTGTTGGAAAGTGCGTACCGCCACATCTATCTTGGTGGACTGGAAACCCCAGATGGCCGCCGACAGGCCGGTGACCGCCAGTACCATCGGCAGTACCGGCGCGGCATAGGTCGAGTCGGCCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3547568‑3547416‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggccaTCTGGGGTTTCCAGTCCACCAAGATAGATGTGGCGGTACGCACTTTCCAACAAAAGCGCGTGGTATTGGTCGACCTTGCCTCGCAGGTGGCGGGCCTGGTGGTGATGCTCGTGCTGGGCTTGCTGACCCATTCGATCTGGGCGCTGG > NC_002947/3547489‑3547635 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |