| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3625930 = | 39 (0.720) | 3 (0.060) | 3/254 | NT | 7.3% | coding (573/939 nt) | PP_3196 | nodulation protein d1 |
| ? | NC_002947 | 3625996 = | 39 (0.750) | coding (507/939 nt) | PP_3196 | nodulation protein d1 | |||||
ATGCGCGGCGAGGTCGACATGATGATCGTGCCCGAGCGCTATCTCATCGAGGGCCATCCGGCGCAGCTGCTGTTCGAGGAAGATCATGTCTGCGTGGTGTGGCGCGACAACCCCGAGGTGGGCGAGCATCTGACACTTGAGCAGTACATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3626079‑3625930‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acatgATCTTCCTCGAACAGCAGCTGCGCCGGATGGCCCTCGATGAGATAGCGCTCGGGCACGATCATCATGTCGACCTCGCCGCGCATCAGCAATTCGGCGCTACTGTCGCCTGGGCCGATCATCTCGAAGGTAATCTGCGGCGCCTC > NC_002947/3625996‑3626139 ATGCGCGGCGAGGTCGACATGATGATCGTGCCCGAGCGCTATCTCATCGAGGGCCATCCGGCGCAGCTGCTGTTCGAGGAAGATCATGTCTGCGTGGTGTGGCGCGACAACCCCGAGGTGGGCGAGCATCTGACACTTGAGCAGTAC < 8:127100/147‑1 GCGCGGCGAGGTCGACATGATGATCGTGCCCGAGCGCTATCTCATCGAGGGCCATCCGGCGCAGCTGCTGTTCGAGGAAGATCATGTCTGCGTGGTGTGGCGCGACAACCCCGAGGTGGGCGAGCATCTGACACTTGAGCAGTACATG > 8:15905/1‑148 GGAAGATCATGTCTGCGTGGTGTGGCGCGACAACCCCGAGGTGGGCGAGCATCTGACACTTGAGCAGTACATGATCTTCCTCGAACAGCAGCTGCGCCGGATGGCCCTCGATGAGATAGCGCTCGGGCACGATCATCATGTCGACCTCG > 5:86162/1‑149 AAGATCATGTCTGCGTGGTGTGGCGCGACAACCCCGAGGTGGGCGAGCATCTGACACTTGAGCAGTACATGATCTTCCTCGAACAGCAGCTGCGCCGGATGGCCCTCGATGAGATAGCGCTCGG < 6:307614/124‑1 CGTGGTGTGGCGCGACAACCCCGAGGTGGGCGAGCATCTGACACTTGAGCAGTACATGATCTTCCTCGAACAGCAGCTGCGCCGGATGGCCCTCGATGAGATAGCGCTCGGGCACGATCATCATGTCGACCTCGCCGCGCATCAGCAA < 6:86162/148‑1 CATGATCTTCCTCGAACAGCAGCTGCGCCGGATGGCCCTCGATGAGATAGCGCTCGGGCACGATCATCATGTCGACCTCGCCGCGCATCAGCAATTCGTCGCTACTGTCGCCTGGGCCGATCATCTCGAAGGTAATCTGCGGCGCCTC < 7:193377/148‑1 ATGCGCGGCGAGGTCGACATGATGATCGTGCCCGAGCGCTATCTCATCGAGGGCCATCCGGCGCAGCTGCTGTTCGAGGAAGATCATGTCTGCGTGGTGTGGCGCGACAACCCCGAGGTGGGCGAGCATCTGACACTTGAGCAGTACATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3626079‑3625930‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acatgATCTTCCTCGAACAGCAGCTGCGCCGGATGGCCCTCGATGAGATAGCGCTCGGGCACGATCATCATGTCGACCTCGCCGCGCATCAGCAATTCGGCGCTACTGTCGCCTGGGCCGATCATCTCGAAGGTAATCTGCGGCGCCTC > NC_002947/3625996‑3626139 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |