New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3643273	46 (0.850)	3 (0.060)	3/250	NT	6.4%	coding (774/804 nt)	PP_3210	ABC transporter permease
	?	NC_002947	= 3643310	44 (0.860)					coding (737/804 nt)	PP_3210	ABC transporter permease

GGCCCGACATGGCGCGCGGCGCCGCCGCGCAGGCCAGTGAGGATGGCGCTGGCGTTACGGATCAGCCAGCTGTTGGTGTGATTCATGTTCGTCTCCATAGCCAGTACGGCGTTTCGCATGGAAGTCAGCCCAGTTCGCTTTCGTGCCAGTGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3643119‑3643273 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggcgcTGTTCAGCCTGATGGCTTTGCTGGCTCGGTTGAGCCTGCGCCACTGGCACGAAAGCGAACTGGGCTGACTTCCATGCGAAACGCCGTACTGGCTATGGAGACGAACATGAATCACACCAACAGCTGGCTGATCCGTAACGC  <  NC_002947/3643310‑3643170                                                                                                                                                                                                                                                                                                          GGCCCGACATGGCGCGCGGCGCCGCCGCGCAGGCCAGTGAGGATGGCGCTGGCGTTACGGATCAGCCAGCTGTTGGTGTGATTCATGTTCGTCTCCATAGCCAGTACGGCGTTTCGCATGGAAGTCAGCCCAGTTCGCTTTCGTGCCAG                                                                                                                                                     >  4:170206/1‑149                                                    GCGTTACGGATCAGCCAGCTGTTGGTGTGATTCATGTTCGTCTCCATAGCCAGTACGGCGTTTCGCATGGAAGTCAGCCCAGTTCGCTTTCGTGCCAGTGGCGCTGTTCAGCCTGATGGCTTTGCTGGCTCGGTTGAGCCTGCGCCACT                                                                                                  <  1:91167/149‑1                                                                AGCCAGCTGTTGGTGTGATTCATGTTCGTCTCCATAGCCAGTACGGCGTTTCGCATGGAAGTCAGCCCAGTTCGCTTTCGTGCCAGTGGCGCTGTTCAGCCTGATGGCTTTGCTGGCTCGGTTGAGCCTGCGCCACTG                                                                                                 <  1:222121/138‑1                                                                AGCCAGCTGTTGGTGTGATTCATGTTCGTCTCCATAGCCAGTACGGCGTTTCGCATGGAAGTCAGCCCAGTTCGCTTTCGTGCCAGTGGCGCTGTTCAGCCTGATGGCTTTGCTGGCTCGGTTGAGCCTGCGCCACTG                                                                                                 >  2:222121/1‑138                                                                                                                                                     GTGGCGCTGTTCAGCCTGATGGCTTTGCTGGCTCGGTTGAGCCTGCGCCACTGGCACGAAAGCGAACTGGGCTGACTTCCATGCGAAACGCCGTACTGGCTATGGAGACGAACATGAATCACACCAACAGCTGGCTGATCCGTAACGC  >  3:162334/1‑148                                                                                                                                                                                                                                                                                                          GGCCCGACATGGCGCGCGGCGCCGCCGCGCAGGCCAGTGAGGATGGCGCTGGCGTTACGGATCAGCCAGCTGTTGGTGTGATTCATGTTCGTCTCCATAGCCAGTACGGCGTTTCGCATGGAAGTCAGCCCAGTTCGCTTTCGTGCCAGTGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3643119‑3643273 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggcgcTGTTCAGCCTGATGGCTTTGCTGGCTCGGTTGAGCCTGCGCCACTGGCACGAAAGCGAACTGGGCTGACTTCCATGCGAAACGCCGTACTGGCTATGGAGACGAACATGAATCACACCAACAGCTGGCTGATCCGTAACGC  <  NC_002947/3643310‑3643170

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.