New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3747583	39 (0.720)	3 (0.060)	3/248	NT	6.8%	coding (1178/1746 nt)	kefB‑II	glutathione‑regulated potassium/H+ antiporter
	?	NC_002947	= 3747640	46 (0.910)					coding (1121/1746 nt)	kefB‑II	glutathione‑regulated potassium/H+ antiporter

GCTCCACGGCGCGGATCACCTCGGGGTCCATGTCGATGATTGAAAGCTTGGCGCCATGAGCGAGCGGTGCCTGACAAGCGATCTGGCCGACACGGCCAAACCCTATGATGAGTACATGGCCTTGGAGATTCTGTGCCGGCTCCACACCGTCCATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3747428‑3747583 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtccatggCCCTCACGCCGGTGAACCTTCTGTTGCTCAAGCGTTTCGCGCGGCCCCGGGCGGTTTCCATGGACGGTGTGGAGCCGGCACAGAATCTCCAAGGCCATGTACTCATCATAGGGTTTGGCCGTGTCGGCCAGATCGCTTGTCAGG  <  NC_002947/3747640‑3747497                                                                                                                                                                                                                                                                                                              GCTCCACGGCGCGGATCACCTCGGGGTCCATGTCGATGATTGAAAGCTTGGCGCCATGAGCGAGCGGTGCCTGACAAGCGATCTGGCCGACACGGCTAAACCCTATGATGAGTACATGGCCTTGGAGATTCTGTGCCGGCTCCACACCG                                                                                                                                                         <  1:85331/149‑1      ACGGCGCGGATCACCTCGGGGTCCATGTCGATGATTGAAAGCTTGGCGCCATGAGCGAGCGGTGCCTGACAAGCGATCTGGCCGACACGGCCAAACCCTATGATGAGTACATGGCCTTGGAGATTCTGTGCCGGCTCCACACCGTCCAT                                                                                                                                                    >  2:138165/1‑149                                        TTGAAAGCTTGGCGCCATGAGCGAGCGGTGCCTGACAAGCGATCTGGCCGACACGGCCAAACCCTATGATGAGTACATGGCCTTGGAGATTCTGTGCCGGCTCCACACCGTCCATGGCCCTCACGCCGGTGAACCTTCTGTTGCTCAAG                                                                                                                  >  7:229493/1‑149                                                             CGAGCGGTGCCTGACAAGCGATCTGGCCGACACGGCCAAACCCTATGATGAGTACATGGCCTTGGAGATTCTGTGCCGGCTCCACACCGTCCATGGCCCTCACGCCGGTGAACCTTCTGTTGCTCAAGCGTTTCGCGCGGCCCCGGGCG                                                                                             <  8:229493/149‑1                                                                            AAGCGATCTGGCCGACACGGCCAAACCCTATGATGAGTACATGGTCTTGGAGATTCTGTGCCGGCTCCACACCGTCCATGGCCCTCACGCCGGTGAACCTTCTGTTGCTCAAGCGTTTCGCGCGGCCCCGGGCGGTTTCCATGGACGGT                                                                              <  7:80479/149‑1                                                                                                                                                        CATGGCCCTCACGCCGGTGAACCTTCTGTTGCTCAAGCGTTTCGCGCGGCCCCGGGCGGTTTCCATGGACGGTGTGGAGCCGGCACAGAATCTCCAAGGCCATGTACTCATCATAGGGTTTGGCCGTGTCGGCCAGATCGCTTGTCAGG  >  1:138165/1‑149                                                                                                                                                        CATGGCCCTCACGCCGGTGAACCTTCTGTTGCTCAAGCGTTTCGCGCGGCCCCGGGCGGTTTCCATGGACGGTGTGGAGCCGGCACAGAATCTCCAAGGCCATGTACTCATCATAGGGTTTGGCCGTGTCGGCCAGATCGCTTGTCAGG  >  4:130612/1‑149                                                                                                                                                                                                                                                                                                              GCTCCACGGCGCGGATCACCTCGGGGTCCATGTCGATGATTGAAAGCTTGGCGCCATGAGCGAGCGGTGCCTGACAAGCGATCTGGCCGACACGGCCAAACCCTATGATGAGTACATGGCCTTGGAGATTCTGTGCCGGCTCCACACCGTCCATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3747428‑3747583 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtccatggCCCTCACGCCGGTGAACCTTCTGTTGCTCAAGCGTTTCGCGCGGCCCCGGGCGGTTTCCATGGACGGTGTGGAGCCGGCACAGAATCTCCAAGGCCATGTACTCATCATAGGGTTTGGCCGTGTCGGCCAGATCGCTTGTCAGG  <  NC_002947/3747640‑3747497

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.