New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3747583	39 (0.720)	3 (0.060)	3/248	NT	6.8%	coding (1178/1746 nt)	kefB‑II	glutathione‑regulated potassium/H+ antiporter
	?	NC_002947	= 3747640	46 (0.910)					coding (1121/1746 nt)	kefB‑II	glutathione‑regulated potassium/H+ antiporter

CCTGACAAGCGATCTGGCCGACACGGCCAAACCCTATGATGAGTACATGGCCTTGGAGATTCTGTGCCGGCTCCACACCGTCCATGGAAACCGCCCGGGGCCGCGCGAAACGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGATAGCCGTCATGTTGGCGTTGATTTCGGCACTGACGACCTTGAGTTTCAGCGCTTCGGTAAACAGCACAAACGCAAATTCGCCCCCCTGCGCCATCAGCACGGCGCGGTCCAGCGCATCGCCATGCTGG  >  NC_002947/3747497‑3747786                                                                                                                                                |                                                                                                                                                   ccTGACAAGCGATCTGGCCGACACGGCCAAACCCTATGATGAGTACATGGCCTTGGAGATTCTGTGCCGGCTCCACACCGTCCATGGAAACCGCCCGGGGCCGCGCGAAACGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGccatg                                                                                                                                               >  1:138165‑M2/1‑144 (MQ=255) ccTGACAAGCGATCTGGCCGACACGGCCAAACCCTATGATGAGTACATGGCCTTGGAGATTCTGTGCCGGCTCCACACCGTCCATGGAAACCGCCCGGGGCCGCGCGAAACGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGccatg                                                                                                                                               >  4:130612‑M2/1‑144 (MQ=255)           gATCTGGCCGACACGGCCAAACCCTATGATGAGTACATGGCCTTGGAGATTCTGTGCCGGCTCCACACCGTCCATGGAAACCGCCCGGGGCCGCGCGAAACGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGCCATGGACAGcacca                                                                                                                                     >  5:76039/1‑149 (MQ=255)                ggCCGACACGGCCAAACCCTATGATGAGTACATGGCCTTGGAGATTCTGTGCCGGCTCCACACCGTCCATGGAAACCGCCCGGGGCCGCGCGAAACGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGa                                                                                                                                  >  4:191212/1‑147 (MQ=255)                 gCCGACACGGCCAAACCCTATGATGAGTACATGGCCTTGGAGATTCTGTGCCGGCTCCACACCGTCCATGGAAACCGCCCGGGGCCGCGCGAAACGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGCCATGGACAGcacca                                                                                                                                     <  8:306550/143‑1 (MQ=255)                        cGGCCAAACCCTATGATGAGTACATGGCCTTGGAGATTCTGTGCCGGCTCCACACCGTCCATGGAAACCGCCCGGGGCCGCGCGAAACGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGATAGCCGTCAt                                                                                                                        <  1:144632/149‑1 (MQ=255)                        cGGCCAAACCCTATGATGAGTACATGGCCTTGGAGATTCTGTGCCGGCTCCACACCGTCCATGGAAACCGCCCGGGGCCGCGCGAAACGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGATAGCCGTCAt                                                                                                                        <  5:157588/149‑1 (MQ=255)                                 ccTATGATGAGTACATGGCCTTGGAGATTCTGTGCCGGCTCCACACCGTCCATGGAAACCGCCCGGGGCCGCGCGAAACGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGATa                                                                                                                                >  1:270027/1‑132 (MQ=255)                                 ccTATGATGAGTACATGGCCTTGGAGATTCTGTGCCGGCTCCACACCGTCCATGGAAACCGCCCGGGGCCGCGCGAAACGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGATa                                                                                                                                <  2:270027/132‑1 (MQ=255)                                        tgaGTACATGGCCTTGGAGATTCTGTGCCGGCTCCACACCGTCCATGGAAACCGCCCGGGGCCGCGCGAAACGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGATAGCCGTCATGTTGGCGTTGATTTCg                                                                                                        >  2:73430/1‑149 (MQ=255)                                        tgaGTACATGGCCTTGGAGATTCTGTGCCGGCTCCACACCGTCCATGGAAACCGCCCGGGGCCGCGCGAAACGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGATAGCCGTCATGTTGGCGTTGATTTCg                                                                                                        <  2:336421/149‑1 (MQ=255)                                               aTGGCCTTGGAGATTCTGTGCCGGCTCCACACCGTCCATGGAAACCGCCCGGGGCCGCGCGAAACGCTTGAGCAACAGAAGGTTCACCGGCCTGAGGGCCATGGACAGCACCACCATAGACGGCAGGTTGGCGTTGATGTCGGCACTga                                                                                                 >  8:242244/1‑149 (MQ=255)                                                     ttGGAGATTCTGTGCCGGCTCCACACCGTCCATGGAAACCGCCCGGGGCCGCGCGAAACGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGATAGCCGTCATGTTGGCGTTGATTTCGGCACTGACGACCt                                                                                           >  2:246582/1‑149 (MQ=255)                                                        gagaTTCTGTGCCGGCTCCACACCGTCCATGGAAACCGCCCGGGGCCGCGCGAAACGCTTTAGCAACAGAAGGTTCACCTGCGTGAGGGCCATGGACAGCACCACGATAGCCGTCATGTTGGCGTTGATTTCGGCACTGACGACCTTGa                                                                                        <  1:40276/149‑1 (MQ=255)                                                        gagaTTCTGTGCCGGCGCCACACCGTCCATGGAAACCGCCCGGGGCCGCGCGAAACGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGATAGCCGTCATGTTGGCGTTGATTTCGGCACTGACGACCTTGa                                                                                        <  6:76039/149‑1 (MQ=255)                                                         agaTTCTGTGCCGGCTCCACACCGTCCATGGAAACCGCCCGGGGCCGCGCGAAACGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGATAGCCGTCATGTTGGCGTTGATTTCGGCACTGACGACCCTGAg                                                                                       <  3:191212/149‑1 (MQ=255)                                                          gaTTCTGTGCCGGCTCCACACCGTCCATGGAAACCGCCCGGGGCCGCGCGAAACGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGATAGCCGTCATGTTGGCGTTGATTTCGGCACTGACGACCTTGAGt                                                                                      >  8:184629/1‑149 (MQ=255)                                                            ttCTGTGCCGGCTCCACACCGTCCATGGAAACCGCCCGGGGCCGCGCGAAACGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGATAGCCGTCATGTTGGCGTTGATTTCGGCACTGACGACCTTGAGttt                                                                                    >  1:243517/1‑149 (MQ=255)                                                                 tgCCGGCTCCACACCGTCCATGGAAACCGCCCGGGGCCGCGCGAAACGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGATAGCCGTCATGTTGGCGTTGATTTCGGCACTGACGACCTTGAGTTTCa                                                                                  <  2:243517/146‑1 (MQ=255)                                                                    cGGCTCCACACCGTCCATGGAAACCGCCCGGGGCCGCGCGAAACGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGATAGCCGTCATGTTGGCGTTGATTTCGGCACTGACGACCTTGAGTTTCAGCGCtt                                                                            >  8:55968/1‑149 (MQ=255)                                                                      gCTCCACACCGTCCATGGAAACCGCCCGGGGCCGCGCGAAACGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGATAGCCGTCATGTTGGCGTTGATTTCGGCACTGACGACCTTGAGTTTCAGCGCTTCg                                                                          <  6:269271/149‑1 (MQ=255)                                                                           acacCGTCCATGGAAACCGCCCGGGGCCGCGCGAAACGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGATAGCGGTCATGTTGGCGTTGATTTCGGCACTGACGAACtt                                                                                          >  2:57024/1‑128 (MQ=255)                                                                           acacCGTCCATGGAAACCGCCCGGGGCCGCGCGAAACGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGATAGCCGTCATGTTGGCGTTGATTTCGGCACTGACGACCTTGAGTTTCAGCGCTTCGGTaaa                                                                     >  8:15326/1‑149 (MQ=255)                                                                             acCGTCCATGGAAACCGCCCGGGGCCGCGCGAAACGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGccatggacggtgtggagccggcacagaatctccaagaccatgtactcatcatagggtttggccgtgtcggccagatcgctt                                                                   <  7:80479‑M2/149‑82 (MQ=255)                                                                             acCGTCCATGGAAACCGCCCGGGGCCGCGCGAAACGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGATAGCCGTCATGTTGGCGTTGATTTCg                                                                                                        <  8:92138/112‑1 (MQ=255)                                                                             acCGTCCATGGAAACCGCCCGGGGCCGCGCGAAACGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGATAGCCGTCATGTTGGCGTTGATTTCg                                                                                                        >  7:92138/1‑112 (MQ=255)                                                                                gtacATGGAAACCGCCCGGGGCCGCGCGAAACGCTTGAGAAACAGAAGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGATAGCCGTCATGTTGGCTTTGATTTAGGCACTGACGACCTTGAGTTTCAGCGATTCGGTAAACAgaa                                                                >  4:253879/4‑147 (MQ=255)                                                                                 tCCATGGAAACCGCCCGGGGCCGCGCGAAACGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGATAGCCGTCATGTTGGCGTTGATTTCGGCACTGACGACCTTGAGTTTCAGCGCTTCGGTAAACAGcac                                                               <  4:2634/149‑1 (MQ=255)                                                                                      ggAAACCGCCCGGGGCCGCGCGAAACGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGATAGCCGTCATGTTGGCGTTGATTTCGGCACTGACGACCTTGAGTTTCAGCGCTTCGGTAAACAGCACAAACg                                                          >  3:288656/1‑149 (MQ=255)                                                                                      ggAAACCGCCCGGGGCCGCGCGAAACGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGATAGCCGTCATGTTGGCGTTGATTTCGGCACTGACGACCTTGAGTTTCAGCGCTTCGGTAAACAGCACAAACg                                                          >  6:113685/1‑149 (MQ=255)                                                                                       gAAACCGCCCGGGGCCGCGCGAAACGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGATAGCCGTCATGGTGGCGTTGATTTCGGCCCTGACGCCCTTGAGTTTCAGCGCTTCGGTAAACAGCACAAACg                                                          >  6:93152/1‑148 (MQ=255)                                                                                            cGCCCGGGGCCGCGCGAAACGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGccatggacggtgtggagccggcacagaatctccaaggccatgtactcatcatagggtttggccgtgtcggccagatcgcttgtcaggcaccgctcg                                                    <  8:229493‑M2/149‑97 (MQ=255)                                                                                               ccGGGGCCGCGCGAAACGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGATAGCCGTCATGTTGGCGTTGATTTCGGCACTGACGACCTTGAGTTTCAGCGCTTCGGTAAACAGCACAAACGCAAATTCGc                                                 <  1:73430/149‑1 (MQ=255)                                                                                                 ggggCCGCGCGAAACGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGATAGCCGTCATGTTGGCGTTGATTTCGGCACTGACGACCTTGAGTTTCAGCGCTTCGGTAAACAGCACAAACGCAAATTCGccc                                               >  6:217668/1‑149 (MQ=255)                                                                                                       gcgcgAAACGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGATAGCCGTCATGTTGGCGTTGATTTCGGCACTGACGACCTTGAGTTTCAGCGCTTCGGTAAACa                                                                   >  2:91749/1‑123 (MQ=255)                                                                                                       gcgcgAAACGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGATAGCCGTCATGTTGGCGTTGATTTCGGCACTGACGACCTTGAGTTTCAGCGCTTCGGTAAACa                                                                   <  1:91749/123‑1 (MQ=255)                                                                                                       gcgcgAAACGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGATAGCCGTCATGTTGGCGTTGATTTCGGCACTGACGACCTTGAGTTTCAGCGCTTCGGTAAACAGCACAAACGCAAATTCGCCCCCCTgc                                         >  5:61813/1‑149 (MQ=255)                                                                                                        cgcgAAACGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGATAGCCCTCATGTTGGCGTTGATTTCGGCACTGACGACCTTGAGTTTCAGCGCTTCGGTAAACAGCACAAACGCAAATTCGCCCCCCTgcg                                        >  3:72586/1‑149 (MQ=255)                                                                                                           gAAACGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGATAGCCGTCATGTTGGCGTTGATTTCGGCACTGACGACCTTGAGTTTCAGCGCTTCGGTAAAc                                                                    <  5:130151/118‑1 (MQ=255)                                                                                                           gAAACGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGATAGCCGTCATGTTGGCGTTGATTTCGGCACTGACGACCTTGAGTTTCAGCGCTTCGGTAAAc                                                                    >  6:130151/1‑118 (MQ=255)                                                                                                           gAAACGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGATAGCCGTCATGTTGGCGTTGATTTCGGCACTGACGACCTTGAGTTTCAGCGCTTCGGTAAACAGCACAAACGCAAATTCGCCCCCCTGCGCCa                                     >  4:90238/1‑149 (MQ=255)                                                                                                            aaaCGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGATAGCCGTCATGTTGGCGTTGATTTCGGCACTGACGACCTTGAGTTTCAGCGCTTCGGTAAACAGCACAAACGCAAATTCGCCCCCCTGCGCCAt                                    <  7:55968/149‑1 (MQ=255)                                                                                                             aaCGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGATAGCCGTCATGTTGGCGTTGATTTCGGCACTGACGACCTTGAGTTTCATCGCTTCGGTAAACAGCACAAACGCAAATTCGCCCCCCTGCGCCATc                                   <  1:246582/149‑1 (MQ=255)                                                                                                              aCGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGATAGCCGTCATGTTGGCGTTGATTTCGGCACTGACGACCTTGAGTTTCAGCGCTTCGGTAAACAGCACAAACGCAAATTCGCCCCCCTGCGCCATCa                                  <  5:217668/149‑1 (MQ=255)                                                                                                                gCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGATAGCCGTCATGTTGGCGTTGATTTCGGCACTGACGACCTTGAGTTTCAGCGCTTCGGTAAACAGCACAAACGCAAATTCGCCCCCCTGCGCCATCAg                                 >  2:332884/1‑148 (MQ=255)                                                                                                                 cTTGAGCAACAGAAGGTTCACCGGCGTGAGGGccatggacggtgtggagccggcacagaatctccaaggccatgtactcatcatagggtttggccgtgtcggccagatcgcttgtcaggcaccgctcgctcatggcgccaagctttcaa                               >  7:229493‑M2/1‑32 (MQ=255)                                                                                                                        aaCAGAAGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGATAGCCGTCATGTTGGCGTTGATTTCGGCACTGACGACCTTGAGTTTCAGCGCTTCGGTAAACAGCACAAACGCAAATTCGCCCCCCTGCGCCATCAGCACGGcgcg                        <  7:242244/149‑1 (MQ=255)                                                                                                                           aGAAGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGATAGCCGTCATGTTGGCGTTGATTTCGGCACTGACGACCTTGAGTTTCAGCGCTTCGGTAAACAGCACAAACGCAAATTCGCCCCCCTGCGCCATCAGCACGGCGCGGTc                     <  7:184629/149‑1 (MQ=255)                                                                                                                              aGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGATAGCCGTCATGTTGGCTTTGATTTCGGCACTGACGACCTTGAGTTTCAGCGCTTCGGTAAACAGCACAAACGCAAATTCGCCCCCCTGCGCCATCAGCACGGCGCGGTCCa                   <  3:253879/148‑1 (MQ=255)                                                                                                                                gTTCACCGGCGTGAGGGCCATGGACAGCACCACGATAGCCGTCATGTTGGCGTTGATTTCGGCACTGACGACCTTGAGTTTCAGCGCTTCGGTAAACAGCACAAACGCAAATTCGCCCCCCTGCGCCATCAGCACGGCGCGGTCCAgcg                >  8:294319/1‑149 (MQ=255)                                                                                                                                     ccGGCGTGAGGGCCATGGACAGCACCACGATAGCCGTCATGTTGGCGTTGATTTCGGCACTGACGACCTTGAGTTTCAGCGCTTCGGTAAACAGCACAAACGCAAATTCGCCCCCCTGCGCCATCAGCACGGCGCGGTCCAGCGCATCg           >  1:141086/1‑149 (MQ=255)                                                                                                                                             aGGGCCATGGACAGCACCACGATAGCCGTCATGTTGGCGTTGATTTCGGCACTGACGACCTTGAGTTTCAGCGCTTCGGTAAACAGCACAAACGCAAATTCGCCCCCCTGCGCCATCAGCACGGCGCGGTCCAGCGCATCGCCATGCTg   <  7:294319/149‑1 (MQ=255)                                                                                                                                              gggCCATGGACAGCACCACGATAGCCGTCATGTTGGCGTTGATTTCGGCACTGACGACCTTGAGTTTCAGCGCTTCGGTAAACAGCACAAACGCAAATTCGCCCCCCTGCGCCATCAGCACGGCGCGGTCCAGCGCATCGCCATGCTgg  <  1:332884/149‑1 (MQ=255)                                                                                                                                              gggCCATGGACAGCACCACGATAGCCGTCATGTTGGCGTTGATTTCGGCACTGACGACCTTGAGTTTCAGCGATTCGGTAAACAGCACAAACGCAAATTCGCCCCCCTGCGCCATCAGCACGGCGCGGTCCAGCGCATCGCCATGCTgg  <  4:276721/149‑1 (MQ=255)                                                                                                                                              gggCCATGGACAGCACCACGATAGCCCTCATGTTGGCGTTGATTTCGGCACTGACGACCTTGAGTTTCAGCGCTTCGGTAAACAGCACAAACGCAAATTCGCCCCCCTGCGCCATCAGCACGGCGCGGTCCAGCGCATCGCCATGCTgg  <  4:72586/149‑1 (MQ=255)                                                                                                                                                |                                                                                                                                                   CCTGACAAGCGATCTGGCCGACACGGCCAAACCCTATGATGAGTACATGGCCTTGGAGATTCTGTGCCGGCTCCACACCGTCCATGGAAACCGCCCGGGGCCGCGCGAAACGCTTGAGCAACAGAAGGTTCACCGGCGTGAGGGCCATGGACAGCACCACGATAGCCGTCATGTTGGCGTTGATTTCGGCACTGACGACCTTGAGTTTCAGCGCTTCGGTAAACAGCACAAACGCAAATTCGCCCCCCTGCGCCATCAGCACGGCGCGGTCCAGCGCATCGCCATGCTGG  >  NC_002947/3747497‑3747786

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.