New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3820393 =	42 (0.780)	3 (0.060)	3/252	NT	6.9%	coding (484/966 nt)	endA	endonuclease I
	?	NC_002947	3820426 =	41 (0.800)					coding (517/966 nt)	endA	endonuclease I

CTTTGACTTCGTCACGCGGTTCGGCGGTGCGCTGGACGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3820432‑3820393 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacgaaGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCAACACCCCGTGTCGGCCTGGGAGAAAGAACGCGACCGGCGCATTGCCG  >  NC_002947/3820426‑3820573                                                                                                                                                                                              CTTTGACTTCGTCACGCGGTTCGGCGGTGCGCTGGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGCACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCAACACCCgg                                         >  1:269464/1‑147   TTGACTTCGTCACGCGGTTCGGCGGTGCGCTGGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCAA                                                <  3:230328/140‑1   TTGACTTCGTCACGCGGTTCGGCGGTGCGCTGGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCAA                                                >  4:230328/1‑140                                      GAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCAACACCCCGTGTCGGCCTGGGAGAAAGAACGCGACCGGCGCATTGC    <  4:225435/149‑1                                      GAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCAACACCCCGTGTCGGCCTGGGAGAAAGAACGCGACCGGCGCATTGC    >  8:104843/1‑149                                        AGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCAACACCCCGTGTCGGCCTGGGAGAAAGAACGCGACCGGCGCATTGCCG  >  2:35167/1‑149                                                                                                                                                                                              CTTTGACTTCGTCACGCGGTTCGGCGGTGCGCTGGACGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3820432‑3820393 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacgaaGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCAACACCCCGTGTCGGCCTGGGAGAAAGAACGCGACCGGCGCATTGCCG  >  NC_002947/3820426‑3820573

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.