New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3820393 =	42 (0.780)	3 (0.060)	3/252	NT	6.9%	coding (484/966 nt)	endA	endonuclease I
	?	NC_002947	3820426 =	41 (0.800)					coding (517/966 nt)	endA	endonuclease I

CAACGACCCGGTGTTCCGCGCCATGGAGGCCGACCTGTTCAACCTTTACCCGGCCGTGGGTGAGGTCAACGGTGACCGCAGCAACTTCAACTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCAACACCCCGTGTCG  >  NC_002947/3820245‑3820539                                                                                                                                                     |                                                                                                                                                   cggcaatgcgccggtcgcgttctttctcccaggccgacacggggtgttgcttgtcccaggccatcagcagctgttgctgttggcgcgacatgttcagcttgtagcggtcgaacatgtagaacgtggtgcgggccaccaggcctttgact                                                                                                                                                    >  2:35167‑M1/149‑149 (MQ=255) cAACGACCCGGTGTTCCGCGCCATGGAGGCCGACCTGTTCAACCTTTACCCGGCCGTGGGTGAGGTCAACGGTGACCGCAGCAACTTCAACTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGAtt                                                                                                                                                    <  4:245464/149‑1 (MQ=255) cAACGACCCGGTGTTCCGCGCCATGGAGGCCGACCTGTTCAACCTTTACCCGGCCGTGGGTGAGGTCAACGGTGACCGCAGCAACTTCAACTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGAtt                                                                                                                                                    >  7:306168/1‑149 (MQ=255)   gcaatgcgccggtcgcgttctttctcccaggccgacacggggtgttgcttgtcccaggccatcagcagctgttgctgttggcgcgacatgttcagcttgtagcggtcgaacatgtagaacgtggtgcgggccaccaggcctttgacTTc                                                                                                                                                  >  8:104843‑M1/147‑149 (MQ=255)   gcaatgcgccggtcgcgttctttctcccaggccgacacggggtgttgcttgtcccaggccatcagcagctgttgctgttggcgcgacatgttcagcttgtagcggtcgaacatgtagaacgtggtgcgggccaccaggcctttgacTTc                                                                                                                                                  <  4:225435‑M1/3‑1 (MQ=255)     gACCCGGTGTTCCGCGCCATGGAGGCCGACCTGTTCAACCTTTACCCGGCCGTGGGTGAGGTCAACGGTGACCGCAGCAACTTCAACTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGt                                                                                                                                                >  7:127340/1‑149 (MQ=255)      aCCCGGTGTTCCGCGCCATGGAGGCCGACCTGTTCAACCTTTACCCGGCCGTGGGTGAGGTCAACGGTGACCGCAGCAACTTCAACTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTc                                                                                                                                               <  8:306168/149‑1 (MQ=255)           gtgtTCCGCGCCATGGAGGCCGACCTGTTCAACCTTTACCCGGCCGTGGGTGAGGTCAACGGTGACCGCAGCAACTTCAACTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAgcg                                                                                                                                          <  5:179244/149‑1 (MQ=255)                 cgcgCCATGGAGGCCGACCTGTTCAACCTTTACCCGGCCGTGGGTGAGGTCAACGGTGACCGCAGCAACTTCAACTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCAccgc                                                                                                                                    >  4:228639/1‑149 (MQ=255)                           aGGCCGACCTGTTCAACCTTTACCCGGCCGTGGGTGAGGTCAACGGTGACCGCAGCAACTTCAACTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGt                                                                                                                          <  8:94012/149‑1 (MQ=255)                             gCCGACCTGTTCAACCTTTACCCGGCCGTGGGTGAGGTCAACGGTGACCGCAGCAACTTCAACTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGa                                                                                                                        <  7:30771/149‑1 (MQ=255)                               cGACCTGTTCAACCTTTACCCGGCCGTGGGTGAGGTCAACGGTGACCGCAGCAACTTCAACTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACg                                                                                                                      <  8:127340/149‑1 (MQ=255)                                   cTGTTCAACCTTTACCCGGCCGTGGGTGAGGTCAACGGTGACCGCAGCAACTTCAACTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGt                                                                                                                  <  4:326976/149‑1 (MQ=255)                                      ttCAACCTTTACCCGGCCGTGGGTGAGGTCAACGGTGACCGCAGCAACTTCACCTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGTACCGCGTGACGAAGTc                                                                                                                 <  5:77364/147‑1 (MQ=255)                                        ccgggtgttgcttgtcccaggccatcagcagctgttgctgttggcgcgacatgtgcagcttgtagcggtcgaacatgtagaacgtggtgcgggccaccaggcctttgacTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAg                                                                                                             >  1:269464‑M1/110‑149 (MQ=255)                                         aaCCTTTACCCGGCCGTGGGTGAGGTCAACGGTGACCGCAGCAACTTCAACTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAACGTCGATTTCGTCCAGCGCACCGCCGAACCTCGTGACGAAGTCAAAgg                                                                                                            >  6:194176/1‑149 (MQ=255)                                           ccTTTACCCGGCCGTGGGTGAGGTCAACGGTGACCGCAGCAACTTCAACTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGcc                                                                                                          >  8:92062/1‑149 (MQ=255)                                            cTTTACCCGGCCGTGGGTGAGGTCAACGGTGACCGCAGCAACTTCAACTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGACGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCt                                                                                                         >  3:228024/1‑149 (MQ=255)                                               ttgcttgtcccaggccatcagcagctgttgctgttggcgcgacatgttcagcttgtagcggtcgaacatgtagaacgtggtgcgggccaccaggcctttgacTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCaa                                                                                                               <  3:230328‑M1/38‑1 (MQ=255)                                               ttgcttgtcccaggccatcagcagctgttgctgttggcgcgacatgttcagcttgtagcggtcgaacatgtagaacgtggtgcgggccaccaggcctttgacTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCaa                                                                                                               >  4:230328‑M1/103‑140 (MQ=255)                                                       cGTGGGTGAGGTCAACGGTGACCGCAGCAACTTCAACTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGca                                                                                              <  7:171559/149‑1 (MQ=255)                                                            gTGAGGTCAACGGTGACCGCAGCAACTTCAACTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACg                                                                                         >  1:22309/1‑149 (MQ=255)                                                                 gTCAACGGTGACCGCAGCAACTTCAACTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTa                                                                                    >  5:70623/1‑149 (MQ=255)                                                                        gTGACCGCAGCAACTTCAACTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAAc                                                                                                                               <  6:213543/99‑1 (MQ=255)                                                                        gTGACCGCAGCAACTTCAACTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTc                                                                             <  4:224079/149‑1 (MQ=255)                                                                           aCCGCAGCAACTTCAACTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGa                                                                           <  7:92062/148‑1 (MQ=255)                                                                              gcagcaACTTCAACTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGc                                                                       >  7:234868/1‑149 (MQ=255)                                                                                      ttCAACTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGAACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGAAGAAGTCAAAGGCATGGTGGCCAGCACCAAGTTCTACATGTTCGACCGCTAAAAgat                                                               >  7:264935/1‑147 (MQ=255)                                                                                        cAACTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAAACGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTg                                                              >  2:293307/1‑148 (MQ=255)                                                                                         aaCTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGaa                                                            <  2:22309/149‑1 (MQ=255)                                                                                           cTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGCCGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACa                                                          >  6:272006/1‑149 (MQ=255)                                                                                           cTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACa                                                          >  5:243987/1‑149 (MQ=255)                                                                                                      tCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGaa                                                            <  2:73445/136‑1 (MQ=255)                                                                                                      tCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCcaa                                               >  2:205383/1‑149 (MQ=255)                                                                                                            gCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCcaacagc                                           <  8:234868/147‑1 (MQ=255)                                                                                                              aaTGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCCAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCcaacagcaaca                                       >  3:225435/1‑149 (MQ=255)                                                                                                                  ccGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAgct                                    <  6:243987/148‑1 (MQ=255)                                                                                                                  ccGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAgct                                    <  3:228639/148‑1 (MQ=255)                                                                                                                   cGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAgctgc                                  >  3:218626/1‑149 (MQ=255)                                                                                                                    ggCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCg                                                                        >  4:307145/1‑110 (MQ=255)                                                                                                                    ggCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCg                                                                        <  3:307145/110‑1 (MQ=255)                                                                                                                     gCGAATACGGCCATTGGACCACCAAGGTCGATTTAGTGCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAgctgc                                  <  5:194176/147‑1 (MQ=255)                                                                                                                       gattACTGCCAATGCTCCACCAAGGTGTATTTCTGCCAGCGCACCGCCGAACCGCGTGACTAAGTCTAAGGCCTGGTTGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGAt                              <  8:264935/146‑1 (MQ=255)                                                                                                                          tACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGc                           <  3:325500/149‑1 (MQ=255)                                                                                                                               ccAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTgg                       >  5:277252/1‑148 (MQ=255)                                                                                                                                cAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGa                     <  6:70623/149‑1 (MQ=255)                                                                                                                                cAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGa                     <  1:205383/149‑1 (MQ=255)                                                                                                                                       ccacgaAGGTCGTTTTCGTCCAGCGCACCGCCGAACCGCGTTAGGTAGTCATAGGCCTGGTGTCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCaa              <  7:307725/149‑1 (MQ=255)                                                                                                                                         accaAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCAaca            >  4:318885/1‑149 (MQ=255)                                                                                                                                           caAGGACGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCAACAcc          <  4:228024/149‑1 (MQ=255)                                                                                                                                               gTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCAACACCCCgt      >  8:96889/1‑149 (MQ=255)                                                                                                                                                   aTTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCAACACCCCGTGTCg  <  5:272006/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                   CAACGACCCGGTGTTCCGCGCCATGGAGGCCGACCTGTTCAACCTTTACCCGGCCGTGGGTGAGGTCAACGGTGACCGCAGCAACTTCAACTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCAACACCCCGTGTCG  >  NC_002947/3820245‑3820539

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.