New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3820393 =	42 (0.780)	3 (0.060)	3/252	NT	6.9%	coding (484/966 nt)	endA	endonuclease I
	?	NC_002947	3820426 =	41 (0.800)					coding (517/966 nt)	endA	endonuclease I

CTGTTCAACCTTTACCCGGCCGTGGGTGAGGTCAACGGTGACCGCAGCAACTTCAACTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCAACACCCCGTGTCGGCCTGGGAGAAAGAACGCGACCGGCGCATTGCCG  >  NC_002947/3820279‑3820573                                                                                                                                                    |                                                                                                                                                    cTGTTCAACCTTTACCCGGCCGTGGGTGAGGTCAACGGTGACCGCAGCAACTTCAACTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGt                                                                                                                                                    <  4:326976/149‑1 (MQ=255)    ttCAACCTTTACCCGGCCGTGGGTGAGGTCAACGGTGACCGCAGCAACTTCACCTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGTACCGCGTGACGAAGTc                                                                                                                                                   <  5:77364/147‑1 (MQ=255)      ccgggtgttgcttgtcccaggccatcagcagctgttgctgttggcgcgacatgtgcagcttgtagcggtcgaacatgtagaacgtggtgcgggccaccaggcctttgacTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAg                                                                                                                                               >  1:269464‑M1/110‑149 (MQ=255)       aaCCTTTACCCGGCCGTGGGTGAGGTCAACGGTGACCGCAGCAACTTCAACTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAACGTCGATTTCGTCCAGCGCACCGCCGAACCTCGTGACGAAGTCAAAgg                                                                                                                                              >  6:194176/1‑149 (MQ=255)         ccTTTACCCGGCCGTGGGTGAGGTCAACGGTGACCGCAGCAACTTCAACTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGcc                                                                                                                                            >  8:92062/1‑149 (MQ=255)          cTTTACCCGGCCGTGGGTGAGGTCAACGGTGACCGCAGCAACTTCAACTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGACGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCt                                                                                                                                           >  3:228024/1‑149 (MQ=255)             ttgcttgtcccaggccatcagcagctgttgctgttggcgcgacatgttcagcttgtagcggtcgaacatgtagaacgtggtgcgggccaccaggcctttgacTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCaa                                                                                                                                                 >  4:230328‑M1/103‑140 (MQ=255)             ttgcttgtcccaggccatcagcagctgttgctgttggcgcgacatgttcagcttgtagcggtcgaacatgtagaacgtggtgcgggccaccaggcctttgacTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCaa                                                                                                                                                 <  3:230328‑M1/38‑1 (MQ=255)                     cGTGGGTGAGGTCAACGGTGACCGCAGCAACTTCAACTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGca                                                                                                                                <  7:171559/149‑1 (MQ=255)                          gTGAGGTCAACGGTGACCGCAGCAACTTCAACTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACg                                                                                                                           >  1:22309/1‑149 (MQ=255)                               gTCAACGGTGACCGCAGCAACTTCAACTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTa                                                                                                                      >  5:70623/1‑149 (MQ=255)                                      gTGACCGCAGCAACTTCAACTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTc                                                                                                               <  4:224079/149‑1 (MQ=255)                                         aCCGCAGCAACTTCAACTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGa                                                                                                             <  7:92062/148‑1 (MQ=255)                                            gcagcaACTTCAACTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGc                                                                                                         >  7:234868/1‑149 (MQ=255)                                                    ttCAACTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGAACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGAAGAAGTCAAAGGCATGGTGGCCAGCACCAAGTTCTACATGTTCGACCGCTAAAAgat                                                                                                 >  7:264935/1‑147 (MQ=255)                                                      cAACTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAAACGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTg                                                                                                >  2:293307/1‑148 (MQ=255)                                                       aaCTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGaa                                                                                              <  2:22309/149‑1 (MQ=255)                                                         cTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGCCGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACa                                                                                            >  6:272006/1‑149 (MQ=255)                                                         cTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACa                                                                                            >  5:243987/1‑149 (MQ=255)                                                                    tCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGaa                                                                                              <  2:73445/136‑1 (MQ=255)                                                                    tCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCcaa                                                                                 >  2:205383/1‑149 (MQ=255)                                                                          gCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCcaacagc                                                                             <  8:234868/147‑1 (MQ=255)                                                                            aaTGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCCAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCcaacagcaaca                                                                         >  3:225435/1‑149 (MQ=255)                                                                                ccGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAgct                                                                      <  3:228639/148‑1 (MQ=255)                                                                                ccGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAgct                                                                      <  6:243987/148‑1 (MQ=255)                                                                                 cGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAgctgc                                                                    >  3:218626/1‑149 (MQ=255)                                                                                  ggCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCg                                                                                                          <  3:307145/110‑1 (MQ=255)                                                                                  ggCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCg                                                                                                          >  4:307145/1‑110 (MQ=255)                                                                                   gCGAATACGGCCATTGGACCACCAAGGTCGATTTAGTGCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAgctgc                                                                    <  5:194176/147‑1 (MQ=255)                                                                                     gattACTGCCAATGCTCCACCAAGGTGTATTTCTGCCAGCGCACCGCCGAACCGCGTGACTAAGTCTAAGGCCTGGTTGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGAt                                                                <  8:264935/146‑1 (MQ=255)                                                                                        tACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGc                                                             <  3:325500/149‑1 (MQ=255)                                                                                             ccAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTgg                                                         >  5:277252/1‑148 (MQ=255)                                                                                              cAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGa                                                       <  6:70623/149‑1 (MQ=255)                                                                                              cAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGa                                                       <  1:205383/149‑1 (MQ=255)                                                                                                     ccacgaAGGTCGTTTTCGTCCAGCGCACCGCCGAACCGCGTTAGGTAGTCATAGGCCTGGTGTCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCaa                                                <  7:307725/149‑1 (MQ=255)                                                                                                       accaAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCAaca                                              >  4:318885/1‑149 (MQ=255)                                                                                                         caAGGACGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCAACAcc                                            <  4:228024/149‑1 (MQ=255)                                                                                                            ctttgacttcgtcacgcggttcggcggtgcgctggacgaaGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGCACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCAAcacccgg                                         >  1:269464‑M2/41‑147 (MQ=255)                                                                                                             gTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCAACACCCCgt                                        >  8:96889/1‑149 (MQ=255)                                                                                                              ttgacttcgtcacgcggttcggcggtgcgctggacgaaGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCaa                                                >  4:230328‑M2/39‑140 (MQ=255)                                                                                                              ttgacttcgtcacgcggttcggcggtgcgctggacgaaGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCaa                                                <  3:230328‑M2/102‑1 (MQ=255)                                                                                                                 aTTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCAACACCCCGTGTCg                                    <  5:272006/149‑1 (MQ=255)                                                                                                                         cAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCAACACCCCGTGTCGGCCTgg                              >  1:335122/1‑147 (MQ=255)                                                                                                                            cgcACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCAACACCCCGTGTCGGCCTGGGagaa                         <  2:335122/149‑1 (MQ=255)                                                                                                                             gcACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCAACACCCCGTGTCGGCCTGGGagaaa                        <  3:318885/149‑1 (MQ=255)                                                                                                                             gcACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCAACACCCCGTGTCGGCCTGGGagaaa                        <  1:293307/149‑1 (MQ=255)                                                                                                                               aCCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATgg                                                              <  8:75733/109‑1 (MQ=255)                                                                                                                               aCCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATgg                                                              >  7:75733/1‑109 (MQ=255)                                                                                                                                 cgccgAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCAACACCCCGTGTCGGCCTGGGAGAAAGAAc                    >  3:249117/1‑149 (MQ=255)                                                                                                                                         cgcgTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCAACACCCCGTGTCGGCCTGGGAGAAAGAACGCGACCgg            >  6:65358/1‑149 (MQ=255)                                                                                                                                          gcgTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCAACACCCCGTGTCGGCCTGGGAGAAAGAACGCGACCGgc           >  5:187555/1‑149 (MQ=255)                                                                                                                                                 gaaGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCAACACCCCGTGTCGGCCTGGGAGAAAGAACGCGACCGGCGCATTGc    >  8:104843‑M2/4‑149 (MQ=255)                                                                                                                                                 gaaGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCAACACCCCGTGTCGGCCTGGGAGAAAGAACGCGACCGGCGCATTGc    <  4:225435‑M2/146‑1 (MQ=255)                                                                                                                                                   aGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCAACACCCCGTGTCGGCCTGGGAGAAAGAACGCGACCGGCGCATTGCCg  >  2:35167‑M2/2‑149 (MQ=255)                                                                                                                                                    gTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACaa                                                    <  7:114229/98‑1 (MQ=255)                                                                                                                                                    gTCAAACGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCAGAACATGTCGCGCCAACAGCAACAGCTCCTGATGGCATGCGACaa                                                    >  8:114229/1‑98 (MQ=255)                                                                                                                                                    |                                                                                                                                                    CTGTTCAACCTTTACCCGGCCGTGGGTGAGGTCAACGGTGACCGCAGCAACTTCAACTACGGCATGGTCACTGGCAATGCCGGCGAATACGGCCAATGCACCACCAAGGTCGATTTCGTCCAGCGCACCGCCGAACCGCGTGACGAAGTCAAAGGCCTGGTGGCCCGCACCACGTTCTACATGTTCGACCGCTACAAGCTGAACATGTCGCGCCAACAGCAACAGCTGCTGATGGCCTGGGACAAGCAACACCCCGTGTCGGCCTGGGAGAAAGAACGCGACCGGCGCATTGCCG  >  NC_002947/3820279‑3820573

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.