| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4030015 = | 41 (0.760) | 4 (0.080) | 4/256 | NT | 9.2% | coding (1393/1623 nt) | PP_3553 | AMP‑binding domain‑containing protein |
| ? | NC_002947 | 4030072 = | 39 (0.750) | coding (1450/1623 nt) | PP_3553 | AMP‑binding domain‑containing protein | |||||
ACGGTCTTCGGCACCTTGAACCCGGCCAGGTGCTCGCGGCACCAACTGGTGATGTCGGCTTCACGGGTGTCCTCCCGGCCTGGCTTTAAGGCAACGAAGGCGCACGGGGTTTCGCCCCATTTTTCATCCGGGCGTGCCACCACGGCGGCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4030166‑4030015‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcGTTGCCTTAAAGCCAGGCCGGGAGGACACCCGTGAAGCCGACATCACCAGTTGGTGCCGCGAGCACCTGGCCGGGTTCAAGGTGCCGAAGACCGTGGTGTTCGGCGAGCTGCCCAAGACCTCGACCGGCAAGATCCAGAAGTACGT > NC_002947/4030072‑4030217 ACGGTCTTCGGCACCTTGAACCCGGCCAGGTGCTCGCGGCACCAACTGGTGATGTCGGCTTCACGGGTGTCCTCCCGGCCTGGCTTTAAGGCAACGAAGGCGCACGGGGTTTCGCCCCATTTTTCATCCGGGCGTGCCACCACGGCGGC > 6:237470/1‑149 GTCTTCGGCACCTTGAACCCGGCCAGGTGCTCGCGGCACCAACTGGTGATGTCGGCTTCACGGGTGTCCTCCCGGCCTGGCTTTAAGGCAACGAAGGCGCACGGGGTTTCGCCCCATTTTTCATCCGGGCGTGCCACCACGGCGGCTTC < 3:322894/149‑1 GTCTTCGGCACCTTGAACCCGGCCAGGTGCTCGCGGCACCAACTGGTGATGTCGGCTTCACGGGTGTCCTCCCGGCCTGGCTTTAAGGCAACGAAGGCGCACGGGGTTTCGCCCCATTTTTCATCCGGGCGTGCCACCACGGCGGCTTC < 8:213757/149‑1 ACGAAGGCGCACGGGGTTTCGCCCCATTTTTCATCCGGGCGTGCCACCACGGCGGCTTCGTTGCCTTAAAGCCAGGCCGGGAGGACACCCGTGAAGCCGACATCACCAGTTGGTGCCGCGAGCACCTGGCCGGGTTCAAGGTGCCG > 2:317660/1‑146 GAAGGCGCACGGGGTTTCGCCCCATTTTTCATCCGGGCGTGCCACCACGGCGGCTTCGTTGCCTTAAAGCCAGGCCGGGAGGACACCCGTGAAGCCGACATCACCAGTTGGTGCCGCGAGCACCTGGCCGGGTTCAAGGTGCCGAAGAC > 7:5783/1‑149 AAGGCGCACGGGGTTTCGCCCCATTTTTCATCCGGGCGTGCCACCACGGCGGCTTCGTTGCCTTAAAGCCAGGCCGGGAGGACACCCGTGAAGCCGACATCACCAGTTGGTGCCGCGAGCACCTGGCCGGGTTCAAGGTGCCGAAGACC > 2:140734/1‑149 GTTTCGCCCCATTTTTCATCCGGGCGTGCCACCACGGCGGCTTCGTTGCCTTAAAGCCAGGCCGGGAGGACACCCGTGAAGCCGACATCACCAGTTGGTGCCGCGAGCACCTGGCCGGGTTCAAGGTGCCGAAGACCGTGGTGTTCGGC < 1:317660/149‑1 TTCGTTGACTTAAAGCCAGGCCGGGAGGACACCCGTGAAGCCGACATCACCAGTTGGTGCCGCGAGCACCTGGCCGGGTTCAAGGTGCCGAAGACCGTGGTGTTCGGCGAGCTGCCCAAGACCTCGACCGGCAAGATCCAGAAGTACGT > 4:247650/1‑149 ACGGTCTTCGGCACCTTGAACCCGGCCAGGTGCTCGCGGCACCAACTGGTGATGTCGGCTTCACGGGTGTCCTCCCGGCCTGGCTTTAAGGCAACGAAGGCGCACGGGGTTTCGCCCCATTTTTCATCCGGGCGTGCCACCACGGCGGCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4030166‑4030015‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcGTTGCCTTAAAGCCAGGCCGGGAGGACACCCGTGAAGCCGACATCACCAGTTGGTGCCGCGAGCACCTGGCCGGGTTCAAGGTGCCGAAGACCGTGGTGTTCGGCGAGCTGCCCAAGACCTCGACCGGCAAGATCCAGAAGTACGT > NC_002947/4030072‑4030217 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |