| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4479492 | 45 (0.840) | 3 (0.060) | 3/250 | NT | 6.5% | coding (843/1203 nt) | ybdR | Zn‑dependent oxidoreductase |
| ? | NC_002947 | = 4479512 | 44 (0.860) | coding (863/1203 nt) | ybdR | Zn‑dependent oxidoreductase | |||||
TATGGCGTCATCCCGATCAACTTCGAAAAGGATGATGATCCTGCCGACAGCATCATTCGCCAGACACCGGGTATGCGTGGCGTGGACGCGGTCATCGATGCGGTCGGGTTTGAAGCCAAAGGCAGCACCACGGAAACCGTGATGACGGCCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4479340‑4479492‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccttgCCGCTGCTACCCTCCAGTTTCAAGGCCGTCATCACGGTTTCCGTGGTGCTGCCTTTGGCTTCAAACCCGACCGCATCGATGACCGCGTCCACGCCACGCATACCCGGTGTCTGGCGAATGATGCTGTCGGCAGGATCATCATCCTT < NC_002947/4479512‑4479367 TATGGCGTCATCCCGATCAACTTCGAAAAGGATGATGATCCTGCCGACAGCATCATTCGCCAGACACCGGGTATGCGTGGCGTGGACGCGGTCATCGATGCGGTCGGGTTTGAAGCCAAAGGCAGCACCACGGAAACCGTGATGACGGC > 1:18515/1‑149TATGGCGTCATCCCGATCAACTTCGAAAAGGATGATGATCCTGCCGACAGCATCATTCGCCAGACACCGGGTATGCGTGGCGTGGACGCGGTCATCGATGCGGTCGGGTTTGAAGCCAAAGGCAGCACCACGGAAACCGTGATGACGGC > 7:231558/1‑149 TGGCGTCATCCCGATCAACTTCGAAAAGGATGATGATCCTGCCGACAGCATCATTCGCCAGACACCGGGTATGCGTGGCGTGGACGCGGTCATCGATGCGGTCGGGTTTGAAGCCAAAGGCAGCACCACGGAAACCGTGATGACGGCCT < 6:46585/149‑1 TGGCGTCATCCCGATCAACTTCGAAAAGGATGATGATCCTGCCGACAGCATCATTCGCCAGACACCGGGTATGCGTGGCGTGGACGCGGTCATCGATGCGGTCGGGTTTGAAGCCAAAGGCAGCACCACGGAAACCGTGATGACGGCC < 8:227694/148‑1 GTCATCCCGATCAACTTCGAAAAGGATGATGATCCTGCCGACAGCATCATTCGCCAGACACCGGGTATGCGTGGCGTGGACGCGGTCATCGATGCGGTCGGGTTTGAAGCCAAAGGCAGCACCACGGAAACCGTGATGACGGCCTTGCC > 3:178832/1‑149 CCTGCCGACAGCATCATTCGCCAGACACCGGGTATGCGTGGCGTGGACGCGGTCATCGATGCGGTCGGGTTTGAAGCCAAAGGCAGCACCACGGAAACCGTGATGACGGCCTTGCCGCTGCTACCCTCCAGTTTCAAGGCCGTCATCA < 4:178832/148‑1 CACCGGGTATGCGTGGCGTGGACGCGGTCATCGATGCGGTCGGGTTTGAAGCCAAAGGCAGCACCACGGAAACCGTGATGACGGCCTTGCCGCTGCTACCCTCCAGTTTCAAGGC < 7:94118/115‑1 CACCGGGTATGCGTGGCGTGGACGCGGTCATCGATGCGGTCGGGTTTGAAGCCAAAGGCAGCACCACGGAAACCGTGATGACGGCCTTGCCGCTGCTACCCTCCAGTTTCAAGGC > 8:94118/1‑115 GGCCTTGCCGCTGCTACCCTCCAGTTTCAAGGCCGTCATCACGGTTTCCGTGGTGCTGCCTTTGGCTTCAAACCCGACCGCATCGATGACCGCGTCCACGCCACGCATACCCGGTGTCTGGCGAATGATGCTGTCGGCAGGATCATCAT > 2:226775/1‑149 GCCTTGCCGCTGCTACCCTCCAGTTTCAAGGCCGTCATCACGGTTTCCGTGGTGCTGCCTTTGGCTTCAAACCCGACCGCATCGATGACCGCGTCCACGCCACGCATACCCGGTGTCTGGCGAATGATGCTGTCGGCAGGATCATCATC < 4:138467/149‑1 CTTGCCGCTGCTACCCTCCAGTTTCAAGGCCGTCATCACGGTTTCCGTGGTGCTGCCTTTGGCTTCAAACCCGACCGCATCGATGACCGCGTCCACGCCACGCATACCCGGTGTCTGGCGAATGATGCTGTCGGCAGGATCATCATCCT > 2:15690/1‑149 TTGCCGCTGCTACCCTCCAGTTTCAAGGCCGTCATCACGGTTTCCGTGGTGCTGCCTTTGGCTTCAAACCCGACCGCATCGATGACCGCGTCCACGCCACGCATACCCGGTGTCTGGCGAATGATGCTGTCGGCAGGATCATCATCCTT > 1:116486/1‑149 TATGGCGTCATCCCGATCAACTTCGAAAAGGATGATGATCCTGCCGACAGCATCATTCGCCAGACACCGGGTATGCGTGGCGTGGACGCGGTCATCGATGCGGTCGGGTTTGAAGCCAAAGGCAGCACCACGGAAACCGTGATGACGGCCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4479340‑4479492‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccttgCCGCTGCTACCCTCCAGTTTCAAGGCCGTCATCACGGTTTCCGTGGTGCTGCCTTTGGCTTCAAACCCGACCGCATCGATGACCGCGTCCACGCCACGCATACCCGGTGTCTGGCGAATGATGCTGTCGGCAGGATCATCATCCTT < NC_002947/4479512‑4479367 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |