| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4694701 = | 34 (0.630) | 4 (0.080) | 4/254 | NT | 11.8% | coding (2576/2931 nt) | PP_4154 | class 3 aminotransferase |
| ? | NC_002947 | 4694725 = | 27 (0.520) | coding (2600/2931 nt) | PP_4154 | class 3 aminotransferase | |||||
TCCAGACCCAGGTAGAAGCCCGAGCCATGTGCCGCGCCGGCCAGCGGGTGCTTGTCGACCAGCGCCTGCAGGCGTGCCTTGAAGTAGCGCCCGGTGTCACGGGCGTTGTCCCACAGGCCTTCCTCCTGCATGACATCCAGCACTGCCATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4694851‑4694701‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catgcAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTCGACAAGCACCCGCTGGCCGGCGCGGCACATGGCTCGGGCTTCTACCTGGGTCTGGAACTGGTGCGCGACCGCAC > NC_002947/4694725‑4694869 TCCAGACCCAGGTAGAAGCCCGAGCCATGTGCCGCGCCGGCCAGCGGGTGCTTGTCGACCAGCGCCTGCAGGCGTGCCTTGAAGTAGCGCCCGGTGTCACGGGCGTTGTCCCACAGGCCTTCCTCCTGCATGACATCCAGCACTGCCA < 1:284418/148‑1TCCAGACCCAGGTAGAAGCCCGAGCCATGTGCCGCGCCGGCCAGCGGGTGCTTGTCGACCAGCGCCTGCAGGCGTGCCTTGAACTAGCGCCCGGTGTCACGGGCGTTGTCCCACAGGCCTTCCTCCTGCATGACATCCAGCACTGCCAT > 3:114592/1‑149 CCAGACCCAGGTAGAAGCCCGAGCCATGTGCCGCGCCGGCCAGCGGGTGCTTGTCGACCAGCGCCTGCAGGCGTGCCTTGAAGTAGCGCCCGGTGTCACGGGCGTTGTCCCACAGGCCTTCCTCCTGCATGACATCCAGCACTGCCATG > 1:133687/1‑149 CAGACCCAGGTAGAAGCCCGAGCCATGTGCTGCGCCGGCCAGCGGGTGCTTGTCGACCAGCGCCTGCAGGCGTGCCTTGAAGTAGCGCCCGGTGTCACGGGCGTTGTCCCACAGGCCTTCCTCCTGCATGACATCCAGCACTGCCATGC < 5:270183/149‑1 CAGACCCAGGTAGAAGCCCGAGCCATGTGCCGCGCCGGCCAGCGGGTGCTTGTCGACCAGCGCCTGCAGGCGTGCCTTGAAGTAGCGCCCGGTGTCACGGGCGTTGTCCCACAGGCCTTCCTCCTGCATGACATCCAGCACTGCCATGC < 2:59142/149‑1 CCAGGTAGAAGCCCGAGCCATGTGCCGCGCCGGCCAGCGGGTGCTTGTCGACCAGCGCCTGCAGGCGTGCCTTGAAGTAGCGCCCGGTGTCACGGGCGTTGTCCCACAGGCCTTCCTCCTGCATGACATCCAGCACTGCCA < 1:54321/141‑1 CCAGGTAGAAGCCCGAGCCATGTGCCGCGCCGGCCAGCGGGTGCTTGTCGACCAGCGCCTGCAGGCGTGCCTTGAAGTAGCGCCCGGTGTCACGGGCGTTGTCCCACAGGCCTTCCTCCTGCATGACATCCAGCACTGCCA > 2:54321/1‑141 CCTCCTGCATGACATCCAGCACTGCCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGG < 3:217727/99‑1 CCTCCTGCATGACATCCAGCACTGCCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGG > 4:217727/1‑99 TCCTGCATGACATCCAGCACTGCCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTCGACAAGC > 7:131928/1‑106 TCCTGCATGACATCCAGCACTGCCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTCGACAAGC < 8:131928/106‑1 ATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTCGACAAGCACCCGCTGGCCGGCGCGGCACATGGCTCGGGCTTCTACCTGGGTCTGGAACTGGTGCGCGACCGCAC > 8:277851/1‑149 GCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGC > 7:64909/1‑58 GCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGC < 8:64909/58‑1 TCCAGACCCAGGTAGAAGCCCGAGCCATGTGCCGCGCCGGCCAGCGGGTGCTTGTCGACCAGCGCCTGCAGGCGTGCCTTGAAGTAGCGCCCGGTGTCACGGGCGTTGTCCCACAGGCCTTCCTCCTGCATGACATCCAGCACTGCCATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4694851‑4694701‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catgcAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTCGACAAGCACCCGCTGGCCGGCGCGGCACATGGCTCGGGCTTCTACCTGGGTCTGGAACTGGTGCGCGACCGCAC > NC_002947/4694725‑4694869 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |