New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4694701 =	34 (0.630)	4 (0.080)	4/254	NT	11.8%	coding (2576/2931 nt)	PP_4154	class 3 aminotransferase
	?	NC_002947	4694725 =	27 (0.520)					coding (2600/2931 nt)	PP_4154	class 3 aminotransferase

CCGGACATCATTACCATGGCCAAGGGCATGGGTAACGGCCAGCCGCTGGGCGTGGTCATCACCCGTCGCGAAATCGCCGAGGCGCTGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTCGACAAGCACCCGCTGGCCGGCGCGGCACATGGCTCGGGCTTCTACCTGGGTCTG  >  NC_002947/4694556‑4694849                                                                                                                                                  |                                                                                                                                                     gtgcggtcgcgcaccagttccagacccaggtagaagcccgagccatgtgccgcgccggccagcgggtgcttgtcgaccagcgcctgcaggcgtgccttgaagtagcgcccggtgtcacgggcgttgtcccacaggccttcctcctGCAt                                                                                                                                                   >  8:277851‑M1/146‑149 (MQ=255) ccGGACATCATTACCATGGCCAAGGGCATGGGTAACGGCCAGCCGCTGGGCGTGGTCATCACCCGTCGCGAAATCGCCGAGGCGCTGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCAt                                                                                                                                                   <  4:259429/149‑1 (MQ=255)   ggACATCATTACCATGGCCAAGGGCATGGGTAACGGCCAGCCGCTGGGCGTGGTCATCACCCGTCGCGAAATCGCCGAGGCGCTGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATgg                                                                                                                                                 >  6:41540/1‑149 (MQ=255)    gACATCATTACCATGGCCAAGGGCATGGGTAACGGCCAGCCGCTGGGCGTGGTCATCACCCGTCGCGAAATCGCCGAGGCGCTGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATgg                                                                                                                                                 >  7:247561/1‑148 (MQ=255)          atTACCATGGCCAAGGGCATGGGTAACGGCCAGCCGCTGGGCGTGGTCATCACCCGTCGCGAAATCGCCGAGGCGCTGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGc                                                                                                                                           <  5:81045/148‑1 (MQ=255)           ttACCATGGCCAAGGGCATGGGTAACGGCCAGCCGCTGGGCGTGGTCATCACCCGTCGCGAAATCGCCGAGGCGCTGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTg                                                                                                                                         >  3:265418/1‑149 (MQ=255)              ccATGGCCAAGGGCATGGGTAACGGCCAGCCGCTGGGCGTGGTCATCACCCGTCGCGAAATCGCCGAGGCGCTGGAGGCCGAGGGCTACTTCTTGTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCTTGGCAGTGCTGGa                                                                                                                                       <  8:84468/148‑1 (MQ=255)              ccATGGCCAAGGGCATGGGTAACGGCCAGCCGCTGGGCGTGGTCATCACCCGTCGCGAAATCGCCGAGGCGCTGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGAt                                                                                                                                      >  5:339534/1‑149 (MQ=255)              ccATGGCCAAGGGCATGGGTAACGGCCAGCCGCTGGGCGTGGTCATCACCCGTCGCGAAATCGCCGAGGCGCTGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGAt                                                                                                                                      >  3:172178/1‑149 (MQ=255)               cATGGCCAAGGGCATGGGTAACGGCCAGCCGCTGGGCGTGGTCATCACCCGTCGCGAAATCGCCGAGGCGCTGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATg                                                                                                                                     >  3:9548/1‑149 (MQ=255)                   gCCAAGGGCATGGGTAACGGCCAGCCGCTGGGCGTGGTCATCACCCGTCGCGAAATCGCCGAGGCGCTGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCAt                                                                                                                                 <  4:265418/149‑1 (MQ=255)                         ggCATGGGTAACGGCCAGCCGCTGGGCGTGGTCATCACCCGTCGCGAAATCGCCGAGGCGCTGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCagga                                                                                                                           <  4:172178/149‑1 (MQ=255)                              gggTAACGGCCAGCCGCTGGGCGTGGTCATCACCCGTCGCGAAATCGCCGAGGCGCTGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAg                                                                                                                      >  4:156759/1‑149 (MQ=255)                               ggTAACGGCCAGCCGCTGGGCGTGGTCATCACCCGTCGCGAAATCGCCGAGGCGCTGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAg                                                                                                                      <  3:299637/148‑1 (MQ=255)                                gTAACGGCCAGCCGCTGGGCGTGGTCATCACCCGTCGCGAAATCGCCGAGGCGCTGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGc                                                                                                                    >  8:150888/1‑149 (MQ=255)                                           ccGCTGGGCGTGGTCATCACCCGTCGCGAAATCGCCGAGGCTCTGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACaa                                                                                                         <  5:330133/149‑1 (MQ=255)                                                       gTCATCACCCGTCGCGAAATCGCCGAGGCGCTGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGacac                                                                                             >  2:169484/1‑149 (MQ=255)                                                       gTCATCACCCGTCGCGAAATCGCCGAGGCGCTGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGacac                                                                                             >  8:7018/1‑149 (MQ=255)                                                           tcaCCCGTCGCGAAATCGCCGAGGCGCTGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCggg                                                                                         <  7:150888/149‑1 (MQ=255)                                                             aCCCGTCGCGAAATCGCCGAGGCGCTGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGgcg                                                                                       >  5:42790/1‑149 (MQ=255)                                                                 gTCGCGAAATCGCCGAGGCGCTGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTAc                                                                                   <  2:285154/149‑1 (MQ=255)                                                                    gcttgtcgaccagcgcctgcaggcgtgccttgaagtagcgcccggtgtcacgggcgttgtcccacaggccttcctcctGCATGGCAGTGCTGGATGTCATGCagga                                                                                                                           >  7:131928‑M1/79‑106 (MQ=255)                                                                    gcttgtcgaccagcgcctgcaggcgtgccttgaagtagcgcccggtgtcacgggcgttgtcccacaggccttcctcctGCATGGCAGTGCTGGATGTCATGCagga                                                                                                                           <  8:131928‑M1/28‑1 (MQ=255)                                                                      gAAATCGCCGAGGCGCTGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCaa                                                                              <  2:147752/149‑1 (MQ=255)                                                                      gAAATCGCCGAGGCGCTGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCaa                                                                              <  3:156759/149‑1 (MQ=255)                                                                       aaaTCGCCGAGGCGCTGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAg                                                                             <  4:9548/149‑1 (MQ=255)                                                                       aaaTCGCCGAGGCGCTGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAg                                                                             <  8:247561/149‑1 (MQ=255)                                                                             ccagcgcctgcaggcgtgccttgaagtagcgcccggtgtcacgggcgttgtcccacaggccttcctcctGCATGGCAGTGCTGGATGTCATGCaggagg                                                                                                                         <  3:217727‑M1/30‑1 (MQ=255)                                                                             ccagcgcctgcaggcgtgccttgaagtagcgcccggtgtcacgggcgttgtcccacaggccttcctcctGCATGGCAGTGCTGGATGTCATGCaggagg                                                                                                                         >  4:217727‑M1/70‑99 (MQ=255)                                                                                      tGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTCCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGgcg                                                              >  4:114592/1‑149 (MQ=255)                                                                                          gcgtgccttgaagtagcgcccggtgtcacgggcgttgtcccacaggccttcctcctGc                                                                                                                                                     <  8:64909‑M1/2‑1 (MQ=255)                                                                                          gcgtgccttgaagtagcgcccggtgtcacgggcgttgtcccacaggccttcctcctGc                                                                                                                                                     >  7:64909‑M1/57‑58 (MQ=255)                                                                                            ccGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTc                                                        <  5:41540/149‑1 (MQ=255)                                                                                            ccGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTc                                                        <  6:339534/149‑1 (MQ=255)                                                                                                 ggCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTCGACaa                                                   <  1:169484/149‑1 (MQ=255)                                                                                                        tcttctCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCCAGGCACGCCTGCAGGCGCTGGTCGCCAAGCACCCg                                            >  4:214655/1‑149 (MQ=255)                                                                                                        tcttctCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTCGACAAGCACCCg                                            >  6:168366/1‑149 (MQ=255)                                                                                                             tcctcGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTCGACAAGCACCCGCTGGc                                       >  3:110960/1‑149 (MQ=255)                                                                                                                          gCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTCGACAAGCACCCGCTGGCCGGCGCGGCACAt                          <  5:168366/149‑1 (MQ=255)                                                                                                                                       ttGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTCGACAAGCACCCGCTGGCCGGCGCgg                               >  2:123200/1‑131 (MQ=255)                                                                                                                                       ttGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTCGACAAGCACCCGCTGGCCGGCGCGGCACATGGCTCGGGCTTc              >  4:317520/1‑148 (MQ=255)                                                                                                                                            gCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTCGACAAGCACCCGCTGGCCGGCGCGGCACATGGCTCGGGCTTCTACCTg        >  4:100949/1‑149 (MQ=255)                                                                                                                                             cATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGTCACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTCGACAAGCACCCGCTGGCCGGCGCGGCACATGGCTCGGGCTTCTACCTgg       >  4:288989/1‑149 (MQ=255)                                                                                                                                             cATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTCGACAAGCACCCGCTGGCCGGCGCGGCACATGGCTCGGGCTTCTACCTgg       >  3:270234/1‑149 (MQ=255)                                                                                                                                                  GCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTCGACAAGCACCCGCTGGCCGGCGCGGCACATGGCTCGGGCTTCTACCTGGGTCTg  <  2:59142‑M1/149‑1 (MQ=255)                                                                                                                                                  GCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTCGACAAGCACCCGCTGGCCGGCGCAGCACATGGCTCGGGCTTCTACCTGGGTCTg  <  5:270183‑M1/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                     CCGGACATCATTACCATGGCCAAGGGCATGGGTAACGGCCAGCCGCTGGGCGTGGTCATCACCCGTCGCGAAATCGCCGAGGCGCTGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTCGACAAGCACCCGCTGGCCGGCGCGGCACATGGCTCGGGCTTCTACCTGGGTCTG  >  NC_002947/4694556‑4694849

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.