New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4694701 =	34 (0.630)	4 (0.080)	4/254	NT	11.8%	coding (2576/2931 nt)	PP_4154	class 3 aminotransferase
	?	NC_002947	4694725 =	27 (0.520)					coding (2600/2931 nt)	PP_4154	class 3 aminotransferase

GGCATGGGTAACGGCCAGCCGCTGGGCGTGGTCATCACCCGTCGCGAAATCGCCGAGGCGCTGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTCGACAAGCACCCGCTGGCCGGCGCGGCACATGGCTCGGGCTTCTACCTGGGTCTGGAACTGGTGCGCGACCGCAC  >  NC_002947/4694580‑4694869                                                                                                                                                  |                                                                                                                                                 ggCATGGGTAACGGCCAGCCGCTGGGCGTGGTCATCACCCGTCGCGAAATCGCCGAGGCGCTGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCagga                                                                                                                                               <  4:172178/149‑1 (MQ=255)      gggTAACGGCCAGCCGCTGGGCGTGGTCATCACCCGTCGCGAAATCGCCGAGGCGCTGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAg                                                                                                                                          >  4:156759/1‑149 (MQ=255)       ggTAACGGCCAGCCGCTGGGCGTGGTCATCACCCGTCGCGAAATCGCCGAGGCGCTGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAg                                                                                                                                          <  3:299637/148‑1 (MQ=255)        gTAACGGCCAGCCGCTGGGCGTGGTCATCACCCGTCGCGAAATCGCCGAGGCGCTGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGc                                                                                                                                        >  8:150888/1‑149 (MQ=255)                   ccGCTGGGCGTGGTCATCACCCGTCGCGAAATCGCCGAGGCTCTGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACaa                                                                                                                             <  5:330133/149‑1 (MQ=255)                               gTCATCACCCGTCGCGAAATCGCCGAGGCGCTGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGacac                                                                                                                 >  8:7018/1‑149 (MQ=255)                               gTCATCACCCGTCGCGAAATCGCCGAGGCGCTGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGacac                                                                                                                 >  2:169484/1‑149 (MQ=255)                                   tcaCCCGTCGCGAAATCGCCGAGGCGCTGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCggg                                                                                                             <  7:150888/149‑1 (MQ=255)                                     aCCCGTCGCGAAATCGCCGAGGCGCTGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGgcg                                                                                                           >  5:42790/1‑149 (MQ=255)                                         gTCGCGAAATCGCCGAGGCGCTGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTAc                                                                                                       <  2:285154/149‑1 (MQ=255)                                            gcttgtcgaccagcgcctgcaggcgtgccttgaagtagcgcccggtgtcacgggcgttgtcccacaggccttcctcctGCATGGCAGTGCTGGATGTCATGCagga                                                                                                                                               >  7:131928‑M1/79‑106 (MQ=255)                                            gcttgtcgaccagcgcctgcaggcgtgccttgaagtagcgcccggtgtcacgggcgttgtcccacaggccttcctcctGCATGGCAGTGCTGGATGTCATGCagga                                                                                                                                               <  8:131928‑M1/28‑1 (MQ=255)                                              gAAATCGCCGAGGCGCTGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCaa                                                                                                  <  3:156759/149‑1 (MQ=255)                                              gAAATCGCCGAGGCGCTGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCaa                                                                                                  <  2:147752/149‑1 (MQ=255)                                               aaaTCGCCGAGGCGCTGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAg                                                                                                 <  4:9548/149‑1 (MQ=255)                                               aaaTCGCCGAGGCGCTGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAg                                                                                                 <  8:247561/149‑1 (MQ=255)                                                     ccagcgcctgcaggcgtgccttgaagtagcgcccggtgtcacgggcgttgtcccacaggccttcctcctGCATGGCAGTGCTGGATGTCATGCaggagg                                                                                                                                             <  3:217727‑M1/30‑1 (MQ=255)                                                     ccagcgcctgcaggcgtgccttgaagtagcgcccggtgtcacgggcgttgtcccacaggccttcctcctGCATGGCAGTGCTGGATGTCATGCaggagg                                                                                                                                             >  4:217727‑M1/70‑99 (MQ=255)                                                              tGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTCCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGgcg                                                                                  >  4:114592/1‑149 (MQ=255)                                                                    ccGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTc                                                                            <  6:339534/149‑1 (MQ=255)                                                                    ccGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTc                                                                            <  5:41540/149‑1 (MQ=255)                                                                         ggCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTCGACaa                                                                       <  1:169484/149‑1 (MQ=255)                                                                                tcttctCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCCAGGCACGCCTGCAGGCGCTGGTCGCCAAGCACCCg                                                                >  4:214655/1‑149 (MQ=255)                                                                                tcttctCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTCGACAAGCACCCg                                                                >  6:168366/1‑149 (MQ=255)                                                                                     tcctcGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTCGACAAGCACCCGCTGGc                                                           >  3:110960/1‑149 (MQ=255)                                                                                                  gCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTCGACAAGCACCCGCTGGCCGGCGCGGCACAt                                              <  5:168366/149‑1 (MQ=255)                                                                                                               ttGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTCGACAAGCACCCGCTGGCCGGCGCgg                                                   >  2:123200/1‑131 (MQ=255)                                                                                                               ttGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTCGACAAGCACCCGCTGGCCGGCGCGGCACATGGCTCGGGCTTc                                  >  4:317520/1‑148 (MQ=255)                                                                                                                    gCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTCGACAAGCACCCGCTGGCCGGCGCGGCACATGGCTCGGGCTTCTACCTg                            >  4:100949/1‑149 (MQ=255)                                                                                                                    cctcctgcatgacatccagcactgccatgcAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTgg                                                                              >  4:217727‑M2/31‑99 (MQ=255)                                                                                                                    cctcctgcatgacatccagcactgccatgcAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTgg                                                                              <  3:217727‑M2/69‑1 (MQ=255)                                                                                                                     cATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGTCACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTCGACAAGCACCCGCTGGCCGGCGCGGCACATGGCTCGGGCTTCTACCTgg                           >  4:288989/1‑149 (MQ=255)                                                                                                                     cATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTCGACAAGCACCCGCTGGCCGGCGCGGCACATGGCTCGGGCTTCTACCTgg                           >  3:270234/1‑149 (MQ=255)                                                                                                                      tcctgcatgacatccagcactgccatgcAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTCGACAAGc                                                                     >  7:131928‑M2/29‑106 (MQ=255)                                                                                                                      tcctgcatgacatccagcactgccatgcAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTCGACAAGc                                                                     <  8:131928‑M2/78‑1 (MQ=255)                                                                                                                          GCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTCGACAAGCACCCGCTGGCCGGCGCGGCACATGGCTCGGGCTTCTACCTGGGTCTg                      <  2:59142‑M1/149‑1 (MQ=255)                                                                                                                          GCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTCGACAAGCACCCGCTGGCCGGCGCAGCACATGGCTCGGGCTTCTACCTGGGTCTg                      <  5:270183‑M1/149‑1 (MQ=255)                                                                                                                           CATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTCGACAAGCACCCGCTGGCCGGCGCGGCACATGGCTCGGGCTTCTACCTGGGTCTgg                     >  1:133687‑M1/1‑149 (MQ=255)                                                                                                                            ATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTAGTTCAAGGCACGCCTGCAGGCGCTGGTCGACAAGCACCCGCTGGCCGGCGCGGCACATGGCTCGGGCTTCTACCTGGGTCTGGa                    >  3:114592‑M1/1‑149 (MQ=255)                                                                                                                             TGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTCGACAAGCACCCGCTGGCCGGCGCGGCACATGGCTCGGGCTTCTACCTgg                           >  2:54321‑M1/1‑141 (MQ=255)                                                                                                                             TGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTCGACAAGCACCCGCTGGCCGGCGCGGCACATGGCTCGGGCTTCTACCTgg                           <  1:54321‑M1/141‑1 (MQ=255)                                                                                                                             TGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTCGACAAGCACCCGCTGGCCGGCGCGGCACATGGCTCGGGCTTCTACCTGGGTCTGGa                    <  1:284418‑M1/148‑1 (MQ=255)                                                                                                                                     cTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTCGACAAGCACCCGCTGGCCGGCGCGGCACATGGCTCGGGCTTCTACCTGGGTCTGGAACTGGTgcg           >  6:233082/1‑149 (MQ=255)                                                                                                                                              atgcAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTCGACAAGCACCCGCTGGCCGGCGCGGCACATGGCTCGGGCTTCTACCTGGGTCTGGAACTGGTGCGCGACCGcac  >  8:277851‑M2/5‑149 (MQ=255)                                                                                                                                                gcAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGc                                                                                           >  7:64909‑M2/3‑58 (MQ=255)                                                                                                                                                gcAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGc                                                                                           <  8:64909‑M2/56‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                 GGCATGGGTAACGGCCAGCCGCTGGGCGTGGTCATCACCCGTCGCGAAATCGCCGAGGCGCTGGAGGCCGAGGGCTACTTCTTCTCCTCGGCCGGTGGCAGCCCGGTCAGTTGCCGCATCGGCATGGCAGTGCTGGATGTCATGCAGGAGGAAGGCCTGTGGGACAACGCCCGTGACACCGGGCGCTACTTCAAGGCACGCCTGCAGGCGCTGGTCGACAAGCACCCGCTGGCCGGCGCGGCACATGGCTCGGGCTTCTACCTGGGTCTGGAACTGGTGCGCGACCGCAC  >  NC_002947/4694580‑4694869

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.