New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4736296 = | 48 (0.890) | 3 (0.060) | 3/256 | NT | 6.5% | coding (290/705 nt) | sdhB | succinate dehydrogenase iron‑sulfur subunit |
? | NC_002947 | 4736394 = | 40 (0.770) | coding (192/705 nt) | sdhB | succinate dehydrogenase iron‑sulfur subunit |
ATGAACGGCAAGAACGGCCTGGCCTGCATCACCCCGCTGTCGGCGGTGGTGAAGGGCGGCAAGCTGGTTCTGCGTCCTCTGCCAGGCCTGCCGGTCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4736393‑4736296 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcatGTTCATGCCATCGGAACCGCAAACGCCTTCACGGCAGGAGCGACGGTAC > NC_002947/4736394‑4736442 ATGAACGGCAAGAACGGCCTGGCCTGCATCACCCCGCTGTCGGCGGTGGTGAAGGGCGGCAAGCTGGTTCTGCGTCCTCTGCCAGGCCTGCCGGTCATGTTCATGCCATCGGAACCGCAAACGCCTTCACGGCAGGAGCGACGGTAC > 3:217528/1‑147 ACGGCAAGAACGGCCTGGCCTGCATCACCCCGCTGTCGGCGGTGGTGAAGGGCGGCAAGCTGGTTCTGCGTCCTCTGCCAGGCCTGCCGGTCATGTTCATGCCATCGGAACCGCAAACGCCTTCACGGC < 3:110035/129‑1 ACGGCAAGAACGGCCTGGCCTGCATCACCCCGCTGTCGGCGGTGGTGAAGGGCGGCAAGCTGGTTCTGCGTCCTCTGCCAGGCCTGCCGGTCATGTTCATGCCATCGGAACCGCAAACGCCTTCACGGC > 4:110035/1‑129 ATGAACGGCAAGAACGGCCTGGCCTGCATCACCCCGCTGTCGGCGGTGGTGAAGGGCGGCAAGCTGGTTCTGCGTCCTCTGCCAGGCCTGCCGGTCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4736393‑4736296 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcatGTTCATGCCATCGGAACCGCAAACGCCTTCACGGCAGGAGCGACGGTAC > NC_002947/4736394‑4736442 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |