New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4736296 =	48 (0.890)	3 (0.060)	3/256	NT	6.5%	coding (290/705 nt)	sdhB	succinate dehydrogenase iron‑sulfur subunit
	?	NC_002947	4736394 =	40 (0.770)					coding (192/705 nt)	sdhB	succinate dehydrogenase iron‑sulfur subunit

GATGCACTCGTACAGGCCGTCCAGCTTGTCACGGTCTTCCGGCGACTGCAGGCGCTCGATGGCCGGGGCCGGGGTGTCGTTCTGCAGGAACGGCTTCACCTTCTCGTACTGCTTGTAGAAGATGCTCATATCGACCACCAGGTCACGAATGACCGGCAGGCCTGGCAGAGGACGCAGAACCAGCTTGCCGCCCTTCACCACCGCCGACAGCGGGGTGATGCAGGCCAGGCCGTTCTTGCCGTTCATGTTCATGCCATCGGAACCGCAAACGCCTTCACGGCAGGAGCGACGGTAC  >  NC_002947/4736148‑4736442                                                                                                                                                     |                                                                                                                                                   gATGCACTCGTACAGGCCGTCCAGCTTGTCACGGTCTTCCGGCGACTGCAGGCGCTCGATGGCCGGGGCCGGGGTGTCGTTCTGCAGGAACGGCTTCACCTTCTCGTACTGCTTGTAGAAGATGCTCATATCGACCACCAGGTCACGaa                                                                                                                                                    >  2:25720/1‑149 (MQ=255)      aCTCGTACAGGCCGTCCAGCTTGTCACGGTCTTCCGGCGACTGCAGGCGCTCGATGGCCGGGGCCGGGGTGTCGTTCTGCAGGAACGGCTTCACCTTCTCGTACTGCTTGTAGAAGATGCTCATATCGACCACCAGGTCACGAATGAcc                                                                                                                                               <  5:302829/149‑1 (MQ=255)      aCTCGTACAGGCCGTCCAGCTTGTCACGGTCTTCCGGCGACTGCAGGCGCTCGATGGCCGGGGCCGGGGTGTCGTTCTGCAGGAACGGCTTCACCTTCTCGTACTGCTTGTAGAAGATGCTCATATCGACCACCAGGTCACGAATGAcc                                                                                                                                               <  2:72212/149‑1 (MQ=255)          gTACAGGCCGTCCAGCTTGTCACGGTCTTCCGGCGACTGCAGGCGCTCGATGGCCGGGGCCGGGGTGTCGTTCTGCAGGAACGGCTTCACCTTCTCGTACTGCTTGTAGAAGATGCTCATATCGACCACCAGGTCACGAATGACCgg                                                                                                                                             >  8:220604/1‑147 (MQ=255)           tACAGGCCGTCCAGCTTGTCACGGTCTTCCGGCGACTGCAGGCGCTCGATGGCCGGGGCCGGGGTGTCGTTCTGCAGGAACGGCTTCACCTTCTCGTACTGCTTGTAGAAGATGCTCATATCGACCACCAGGTCACGAATGACCGGCAg                                                                                                                                          >  1:277949/1‑149 (MQ=255)               ggCCGTCCAGCTTGTCACGGTCTTCCGGCGACTGCAGGCGCTCGATGGCCGGGGCCGGGGTGACGTTCTGCAGCAACGGCTTCACATTCTCGTACTGCTTGTAGAAGATGCTCATATCGACCACCAGGTCACGAATCACCGGCAGGc                                                                                                                                        >  6:317969/1‑147 (MQ=255)                gCCGTCCAGCTTGTCACGGTCTTCCGGCGACTGCAGGCGCTCGATGGCCGGGGCCGGGGTGTCGTTCTGCAGGAACGGCTTCACCTTCTCGTACTGCTTGTAGAAGATGCTCATATCGACCACCAGGTCACGAATGACCGGCAGGCCTg                                                                                                                                     >  5:96003/1‑149 (MQ=255)                   gTCCAGCTTGTCACGGTCTTCCGGCGACTGCAGGCGCTCGATGGCCGGGGCCGGGGTGTCGTTCTGCAGGAACGGCTTCACCTTCTCGTACTGCTTGTAGAAGATGCTCATATCGACCACCAGGTCACGAATGACCGGCAGGCCTgg                                                                                                                                    >  7:218660/1‑147 (MQ=255)                   gTCCAGCTTGTCACGGTCTTCCGGCGACTGCAGGCGCTCGATGGCCGGGGCCGGGGTGTCGTTCTGCAGGAACGGCTTCACCTTCTCGTACTGCTTGTAGAAGATGCTCATATCGACCACCAGGTCACGAATGACCGGCAGGCCTGGCa                                                                                                                                  <  2:105331/149‑1 (MQ=255)                      cAGCTTGTCACGGTCTTCCGGCGACTGCAGGCGCTCGATGGCCGGGGCCGGGGTGTCGTTCTGCAGGAACGGCTTCACCTTCTCGTACTGCTTGTAGAAGATGCTCATATCGACCACCAGGTCACGAATGACCGGCAGGCCTGGCagag                                                                                                                               >  1:213225/1‑149 (MQ=255)                      cAGCTTGTCACGGTCTTCCGGCGACTGCAGGCGCTCGATGGCCGGGGCCGGGGTGTCGTTCTGCAGGAACGGCTTCACCTTCTCGTACTGCTTGTAGAAGATGCTCATATCGACCACCAGGTCACGAATGACCGGCAGGCCTGGCagag                                                                                                                               >  3:54508/1‑149 (MQ=255)                      cAGCTTGTCACGGTCTTCCGGCGACTGCAGGCGCTCGATGGCCGGGGCCGGGGTGTCGTTCTGCAGGAACGGCTTCACCTTCTCGTACTGCTTGTAGAAGATGCTCATATCGACCACCAGGTCACGAATGACCGGCAGGCCTGGCaga                                                                                                                                <  4:314496/148‑1 (MQ=255)                        gCTTGTCACGGTCTTCCGGCGACTGCAGGCGCTCGATGGCCGGGGCCGGGGTGTCGTTCTGCAGGAACGGCTTCACCTTCTCGTACTGCTTGTAGAAGATGCTCATATCGACCACCAGGTCACGAATGACCGGCAGGCCTGGCAGAGGa                                                                                                                             <  7:161481/149‑1 (MQ=255)                            gTCACGGTCTTCCGGCGACTGCAGGCGCTCGATGGCCGGGGCCGGTGTGTCGTTCTGCAGGAACGGCTTCACCTTCTCGTACTGCTTGTAGAAGATGCTCATATCGACCACCAGGTCACGAATGACCGGCAGGCCTGGCAGAGGACGc                                                                                                                          <  7:126173/148‑1 (MQ=255)                                 ggTCTTCCGGCGACTGCAGGCGCTCGATGGCCGGGGCCGGGGTGTCGTTCTGCAGGAACGGCTTCACCTTCTCGTACTGCTTGTAGAAGATGCTCATATCGACCACCAGGTCACGAATGACCGGCAGGCCTGGCAGAGGACGCAGAAcc                                                                                                                    <  7:220604/149‑1 (MQ=255)                                              cTGCAGGCGCTCGATGGCCGGGGCCGGGGTGTCGTTCTGCAGGAACGGCTTCACCTTCTCGTACTGCTTGTAGAAGATGCTCATATCGACCACCAGGTCACGAATGACCGGCAGGCCTGGCAGAGGACGCAGAACCAGCTTGCCGCCCt                                                                                                       <  2:276729/149‑1 (MQ=255)                                                                cggggccggggTGTCGTTCTGCAGGAACGGCTTCACCTTCTCGTACTGCTTGTAGAAGATGCTCATATCGCCCACCAGGTCACGAATGACCGGCAGGCCTGGCAGAGGACGCAGAACCAGCTTGCCGCCCTTCACCACCGCCGACAGCg                                                                                     >  8:143184/1‑149 (MQ=255)                                                                cggggccggggTGTCGTTCTGCAGGAACGGCTTCACCTTCTCGTACTGCTTGTAGAAGATGCTCATATCGACCACCAGGTCACGAATGACCGGCAGGCCTGGCAGAGGACGCAGAACCAGCTTGCCGCCCTTCACCACCGCCGACAGCg                                                                                     <  8:23751/149‑1 (MQ=255)                                                                  gggccggggTGTCGTTCTGCAGGAACGGCTTCACCTTCTCGTACTGCTTGTAGAAGATGCTCATATCGACCACCAGGTCACGAATGACCGGCAGGCCTGGCAGAGGACGCAGAACCAGCTTGCCGCCCTTCACCACCGCCGACAGCggg                                                                                   <  6:96003/149‑1 (MQ=255)                                                                        gggTGTCGTTCTGCAGGAACGGCTTCACCTTCTCGTACTGCTTGTAGAAGATGCTCATATCGACCACCAGGTCACGAATGACCGGCAGGCCTGGCAGAGGACGCAGAACCAGCTTGCCGCCCTTCACCACCGCCGACAGCGGGGTGATg                                                                             >  7:231505/1‑149 (MQ=255)                                                                         ggTGTCGTTCTGCAGGAACGGCTTCACCTTCTCGTACTGCTTGTAGAAGATGCTCATATCGACCACCAGGTAACGAATGACCGGCAGGCCTGGCAGAGGACGCAGAACCAGCTTGCCGCCCTTCACCACCGCCGACAGCGGGGTGATg                                                                             >  7:305335/1‑148 (MQ=255)                                                                             tCGTTCTGCAGGAACGGCTTCACCTTCTCGTACTGCTTGTAGAAGATGCTCATATCGACCACCAGGTCACGAATGACCGGCAGGCCTGGCAGAGGACGCAGAACCAGCTTGCCGCCCTTCACCACCGCCGACAGCGGGGTGATGcaggc                                                                        >  5:273267/1‑149 (MQ=255)                                                                             tCGTTCTGCAGGAACGGCTTCACCTTCTCGTACTGCTTGTAGAAGATGATCATATCGACCACCAGGTCACGAATGACCGGCAGGACTGGCAGAGGACGCAGAACCAGCTTGCCGCACTTCACCACCGCCCACAGCGGGGTGATTcaggc                                                                        >  6:266064/1‑149 (MQ=255)                                                                                     cAGGAACGGCTTCACCTTCTCGTACTGCTTGTAGAAGATGCTCATATCGACCACCAGGTCACGAATGACCGGCAGGCCTGGCAGAGGACGCAGAACCAGCTTGCCGCCCTTCACCACCGCCGACAGCGGGGTGATGCAGGCCAGGCCGt                                                                >  7:302270/1‑149 (MQ=255)                                                                                      aGGAACGGCTTCACCTTCTCGTACTGCTTGTAGAAGATGCTCATATCGACCACCAGGTCACGAATGACCGGCAGGCCTGGCAGAGGACGCAGAACCAGCTTGCCGCCCTTCACCACCGCCGACAGCGGGGTGATGCAGGCCAGGCCGtt                                                               <  2:277949/149‑1 (MQ=255)                                                                                      aGGAACGGCTTCACCTTCTCGTACTGCTTGTAGAAGATGCTCATATCGACCACCAGGTCACGAATGACCGGCAGGCCTGGCAGAGGACGCAGAACCAGCTTGCCGCCCTTCACCACCGCCGACAGCGGGGTGATGCAGGCCAGGCCGt                                                                >  7:198565/1‑148 (MQ=255)                                                                                         aaCGGCTTCACCTTCTCGTACTGCTTGTAGAAGATGCTCATATCGACCACCAGGTCACGAATGACCGGCAGGCCTGGCAGAGGACGCAGAACCAGCTTGCCGCCCTTCACCACCGCCGACAGCGGGGTGATGCAGGCCAGGCCGTTCtt                                                            <  8:218660/149‑1 (MQ=255)                                                                                               ttCAACTTCTCGTTCTGCTTGTAGAAGATGCTCATATCGACCACCTGGTCACGAATTACCGGCAGGCCTGGCAGAGGACGCAGAACCAGCTTGCCGCCCTTCACCACCGCCGACAGCGGGGTGATGCAGGCCAGGCCGTTCTTGCCgtt                                                      <  8:305335/149‑1 (MQ=255)                                                                                                    gtaccgtcgctcctgccgtgaaggcgtttgcggttccgatggcatgaacATGACCGGCAGGCCTGGCAGAGGACGCAGAACCAGCTTGCCGCCCTTCACCACCGCCGACAGCGGGGTGATGCAGGCCAGGCCGTTCTTGCCgttcat                                                   >  3:217528‑M1/50‑147 (MQ=255)                                                                                                    cTTCTCGTACTGCTTGTAGAAGATGCTCATATCGACCACCAGGTCACGAATGACCGGCAGGCCTGGCAGAGGACGCAGAACCAGCTTGCCGCCCTTCACCACCGCCGACAGCGGGGTGATGCAGGCCAGGCCGTTCTTGCCgttcatgt                                                 >  4:191551/1‑149 (MQ=255)                                                                                                      tctcGTACTGCTTGTAGAAGATGCTCATATCGACCACCAGGTCACGAATGACCGGCAGGCCTGGCAGAGGACGCAGAACCAGCTTGCCGCCCTTCACCACCGCCGACAGCGGGGTGATGCAGGCCAGGCCGTTCTTGCCgttcatgtt                                                >  3:292636/1‑148 (MQ=255)                                                                                                       ctcGTACTGCTTGTAGAAGATGCTCATATCGACCACCAGGTCACGAATGACCGGCAGGCCTGGCAGAGGACGCAGAACCAGCTTGCCGCCCTTCACCACCGCCGACAGCGGGGTGATGCAGGCCAGGCCGTTCTTGCCgttcatgttca                                              >  8:62780/1‑149 (MQ=255)                                                                                                          gTACTGCTTGTAGAAGATGCTCATATCGACCACCAGGTCACGAATGACCGGCAGGCCTGGCAGAGGACGCAGAACCAGCTTGCCGCCCTTCACCACCGCCGACAGCGGGGTGATGCAGGCCAGGCCGTTCTTGCCGTTCATGTTCATGc                                           >  2:126307/1‑149 (MQ=255)                                                                                                              tGCTTGTAGAAGATGCTCATATCGACCACCAGGTCACGAATGACCGGCAGGCCTGGCAGAGGACGCAGAACCAGCTTGCCGCCCTTCACCACCGCCGACAGCGGGGTGATGCAGGCCAGGCCGTTCTTGCCGTTCATGTTCATGCCATc                                       >  7:158333/1‑149 (MQ=255)                                                                                                                cTTGTAGAAGATGCTCATATCGACCACCAGGTCACGAATGACCGGCAGGCCTGGCAGAGGACGCAGAACCAGCTTGCCGCCCTTCACCACCGCCGACAGCGGGGTGATGCAGGCCAGGCCGTTCTTGCCgttcatg                                                  >  2:249214/1‑136 (MQ=255)                                                                                                                cTTGTAGAAGATGCTCATATCGACCACCAGGTCACGAATGACCGGCAGGCCTGGCAGAGGACGCAGAACCAGCTTGCCGCCCTTCACCACCGCCGACAGCGGGGTGATGCAGGCCAGGCCGTTCTTGCCgttcatg                                                  <  1:249214/136‑1 (MQ=255)                                                                                                                  gccgtgaaggcgtttgcggttccgatggcatgaacATGACCGGCAGGCCTGGCAGAGGACGCAGAACCAGCTTGCCGCCCTTCACCACCGCCGACAGCGGGGTGATGCAGGCCAGGCCGTTCTTGCCgt                                                       >  4:110035‑M1/36‑129 (MQ=255)                                                                                                                  gccgtgaaggcgtttgcggttccgatggcatgaacATGACCGGCAGGCCTGGCAGAGGACGCAGAACCAGCTTGCCGCCCTTCACCACCGCCGACAGCGGGGTGATGCAGGCCAGGCCGTTCTTGCCgt                                                       <  3:110035‑M1/94‑1 (MQ=255)                                                                                                                   gTAGAAGATGCTCATATCGACCACCAGGTCACGAATGACCGGCAGGCCTGGCAGAGGACGCAGAACCAGCTTGCCGCCCTTCACCACCGCCGACAGCGGGGTGATGCAGGCCAGGCCGTTCTTGCCGTTCATGTTCATGCCATCGGa                                    <  6:273267/147‑1 (MQ=255)                                                                                                                   gTAGAAGATGCTCATATCGACCACCAGGTCACGAATGACCGGCAGGCCTGGCAGAGGACGCAGAACCAGCTTGCCGCCCTTCACCACCGCCGACAGCGGGGTGATGCAGGCCAGGCCGTTCTTGCCGTTCATGTTCATGCCATCGGAAc                                  >  2:260445/1‑149 (MQ=255)                                                                                                                      gaagaTGCTCATATCGACCACCAGGTCACGAATGACCGGCAGGCCTGGCAGAGCACGCAGAACCACCTTGCCGCCCTTCACCACCGCCGACAGCGGGGTGATGCAGGCCAGGCCGTTCTTGCCGTTCATGTTCATGCCATCGGAACCGc                               <  4:36877/149‑1 (MQ=255)                                                                                                                        agaTGCTCATATCGACCACCAGGTCACGAATGACCGGCAGGCCTGGCAGAGGACGCAGAACCAGCTTGCCGCCCTTCACCACCGCCGACAGCGGGGTGATGCAGGCCAGGCCGTTCTTGCCGTTCATGTTCATGCCATCGGAACCGCa                              >  3:300251/1‑148 (MQ=255)                                                                                                                                atatCGACCACCAGGTCACGAATGACCGGCAGGCCTGGCAGAGGACGCAGAACCAGCTTGCCGCCCTTCACCACCGCCGACAGCGGGGTGATGCAGGCCAGGCCGTTCTTGCCGTTCATGTTCATGCCATCGGAACCGCAAACGCCTTc                     >  4:73349/1‑149 (MQ=255)                                                                                                                                    cGACCACCAGGTCACGAATGACCGGCAGGCCTGGCAGAGGACGCAGAACCAGCTTGCCGCCCTTCACCACCGCCGACAGCGGGGTGATGCAGGCCAGGCCGTTCTTGCCGTTCATGTTCATGCCATCGGAACCGCAAACGCCTTCACgg                 >  3:174183/1‑149 (MQ=255)                                                                                                                                    cGACCACCAGGTCACGAATGACCGGCAGGCCTGGCAGAGGACGCAGAACCAGCTTGCCGCCCTTCACCACCGCCGACAGCGGGGTGATGCAGGCCAGGCCGTTCTTGCCGTTCATGTTCATGCCATCGGAACCGCAAACGCCTTCACgg                 >  2:39184/1‑149 (MQ=255)                                                                                                                                     gACCACCAGGTCACGAATGACCGGCAGGCCTGGCAGAGGACGCAGAACCAGCTTGCCGCCCTTCACCACCGCCGACAGCGGGGTGATGCAGGCCAGGCCGTTCTTGCCGTTCATGTTCATGCCATCGGAACCGCAAACGCCTTCACgg                 <  8:302270/148‑1 (MQ=255)                                                                                                                                          ccaGGTCACGAATGACCGGCAGGCCTGGCAGAGGACGCAGAACCAGCTTGCCGCCCTTCACCACCGCCGACAGCGGGGTGATGCAGGCCAGGCCGTTCTTGCCgttcat                                                   <  2:226953/109‑1 (MQ=255)                                                                                                                                          ccaGGTCACGAATGACCGGCAGGCCTGGCAGAGGACGCAGAACCAGCTTGCCGCCCTTCACCACCGCCGACAGCGGGGTGATGCAGGCCAGGCCGTTCTTGCCgttcat                                                   >  1:226953/1‑109 (MQ=255)                                                                                                                                          ccaGGTCACGAATGACCGGCAGGCCTGGCAGAGGACGCAGAACCAGCTTGCCGCCCTTCACCACCGCCGACAGCGGGGTGATGCAGGCCAGGCCGTTCTTGCCGTTCATGTTCATGCCATCGGAACCGCAAACGCCTTCACGGCAGGAg           <  4:174183/149‑1 (MQ=255)                                                                                                                                           caGGTCACGAATGACCGGCAGGCCTGGCAGAGGACGCAGAACCAGCTTGCCGCCCTTCACCACCGCCGACAGCGGGGTGATGCAGGCCAGGCCGTTCTTGCCGTTCATGTTCATGCCATCGGAACCGCAAACGCCTTCACGGCAGGAGc          <  7:62780/149‑1 (MQ=255)                                                                                                                                              gTCACGAATGACCGGCAGGCCTGGCAGAGGACGCAGAACCAGCTTGCCGCCCTTCACCACCGCCGACAGCGGGGTGATGCAGGCCAGGCCGTTCTTGCCGTTCATGTTCATGCCATCGGAACCGCAAACGCCTTCACGGCAGGAGCGAc       <  4:54508/149‑1 (MQ=255)                                                                                                                                               tCACGAATGACCGGCAGGCCTGGCAGAGGACGCAGAACCAGCTTGCCGCCCTTCACCACCGCCGACAGCGGGGTGATGCAGGCCAGGCCGTTCTTGCCGTTCATGTTCATGCCATCGGAACCGCAAACGCCTTCACGGCAGGAGCGACg      <  5:266064/149‑1 (MQ=255)                                                                                                                                                   gAATGACCGGCAGGCCTGGCAGAGGACGCAGAACCAGCTTGCCGCCCTTCACCACCGCCGACAGCGGGGTGATGCAGGCCAGGCCGGTCTTGCCGTTCATGTTCATGCCATCGGAACCGCAACCGCCTTCACGGCAGGCGCGCCGGTAc  >  5:4588/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                   GATGCACTCGTACAGGCCGTCCAGCTTGTCACGGTCTTCCGGCGACTGCAGGCGCTCGATGGCCGGGGCCGGGGTGTCGTTCTGCAGGAACGGCTTCACCTTCTCGTACTGCTTGTAGAAGATGCTCATATCGACCACCAGGTCACGAATGACCGGCAGGCCTGGCAGAGGACGCAGAACCAGCTTGCCGCCCTTCACCACCGCCGACAGCGGGGTGATGCAGGCCAGGCCGTTCTTGCCGTTCATGTTCATGCCATCGGAACCGCAAACGCCTTCACGGCAGGAGCGACGGTAC  >  NC_002947/4736148‑4736442

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.