New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5456444	36 (0.670)	3 (0.060)	3/250	NT	7.9%	coding (176/2607 nt)	leuS	leucine‑‑tRNA ligase
	?	NC_002947	= 5456493	36 (0.710)					coding (225/2607 nt)	leuS	leucine‑‑tRNA ligase

CGTGATATCGAAGCCGCCGCCCAGAAGTTCTGGGACGAGCAACAATCGTTCGCTGTTACCGAACAGCCAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5456290‑5456444 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccatcggCTGCAGGACGTTCTTGCCCAGCATGCGCTGGTAGCGGGCAATCACGTCACCGATGGTGTAGTTGCGCACGTGGCCCATGTGTAGCTTGCCGCTCGGGTACGGGAACATCGATAGGCAATAGTAGGTGTCTTTGCCTGGCTGTTCG  <  NC_002947/5456493‑5456349                                                                                                                                                                                                                                                                                                              CGTGATATCGAAGCCGCCGCCCAGAAGTTCTGGGACGAGCAACAATCGTTCGCTGTTACCGAACAGCCAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACAC                                                                                                                                                         >  6:106214/1‑149     ATATCGAAGCCGCCGCCCAGAAGTTCTGGGACGAGCAACAATCGTTCGCTGTTACCGAACAGCCAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATC                                                                                                                                                     >  3:42675/1‑149      TATCGAAGCCGCCGCCCAGAAGTTCTGGGACGAGCAACAATCGTTCGCTGTTACCGAACAGCCAGGCAAAGACACCTACTATTGCCTTTCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCG                                                                                                                                                    <  8:268371/149‑1        TCGAAGCCGCCGCCCAGAAGTTCTGGGACGAGCAACAATCGTTCGCTGTTACCGAACAGCCAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGG                                                                                                                                                   <  3:270947/148‑1                                       GCAACAATCGTTCGCTGTTACCGAACAGCCAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGCTGCAGGACGTTCTTGCCCAGCATGCGCTGG                                                                                                                    >  8:151972/1‑148                                                    GCTGTTACCGAACAGCCAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGCTGCAGGACGTTCTTGCCCAGCATGCGCTGGTAGCGGGCAATCAC                                                                                                      <  4:306649/149‑1                                                                    CAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGGCTGCAGGACGTTCTTGCCCAGCATGCGCTGGTAGCGGGCAATCACGTCACCGATGGTGTAG                                                                                      <  7:151972/149‑1                                                                                                                                                        TCGGCTGCAGGACGTTCTTGCCCAGCATGCGCTGGTAGCGGGCAATCACGTCACCGATGGTGTAGTTGCGCACGTGGCCCATGTGTAGCTTGCCGCTCGGGTACGGGAACATCGATAGGCAATAGTAGGTGTCTTTGCCTGGCTGTTCG  <  6:274689/149‑1                                                                                                                                                                                                                                                                                                              CGTGATATCGAAGCCGCCGCCCAGAAGTTCTGGGACGAGCAACAATCGTTCGCTGTTACCGAACAGCCAGGCAAAGACACCTACTATTGCCTATCGATGTTCCCGTACCCGAGCGGCAAGCTACACATGGGCCACGTGCGCAACTACACCATCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5456290‑5456444 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccatcggCTGCAGGACGTTCTTGCCCAGCATGCGCTGGTAGCGGGCAATCACGTCACCGATGGTGTAGTTGCGCACGTGGCCCATGTGTAGCTTGCCGCTCGGGTACGGGAACATCGATAGGCAATAGTAGGTGTCTTTGCCTGGCTGTTCG  <  NC_002947/5456493‑5456349

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.